Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0295400-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:11528034:11533692:1 gene:Os07g0295400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os07t0295400-01);Conserved hypothetical protein. (Os07t0295400-02)
Sequence

ATGTTCGGCACCCCGGCTTCGTCGCCCCTATTTGGGACCCCCTCCACCACCCCGGCATTC
GGCGCCCCTTCCTCCACCCCTGCATTCGGCACGCCCTCCACCAACCCCGCCTTCGGCACC
CCTTCCTCCACGCCGGCGTTCGGCGCGCCGTCGTCCACCCCGTCCTTCGGCACCCCCTCC
ACCGCGCCCGCGTTCGGGACCCCGTCCTCGACCCCGGCGTTCGGCGCGCCCTCCTCGACC
CCTGCCTTCGGGGCGCCCTTCTCGACCCCGGCGTTCGGCGTGGCGCCGTCGCCGTCGCCA
TCGCCGTTTGGGTTCCAGCAGCAGATGACGCCGTCCCCGTCGCCGTTCGGGTTCGCCGGT
GGGGGCGGCGGGCAGATCACCACCCAGATGGCCCCCGTCGCGCCGCTCCCGCTCTCGCCC
TCCGACCGTGACATCCAGGCTATCGTGGATGCGTACAAGGAGGATCCTGGAAACCCTCGT
TATGCTTTCAGGCATCTGTTGTTTAGTGTTACAGAGCCTTCACAACGGGTGAAGCCAGTT
GCGGCATCTGATATCATGTGGGCAGAAGCTATGGGGAAGCTTGAGGGCATGGATAGTTCG
GATAGGGAGAGGCTGTGGCCTCAACTCGTGCAGGGATTTAAGGATCTTTCCTACCGGCTT
AAGCTTCAAGATGGAGTTCTTGTCTCAGATTCTGATAGATTGAGCATGACACGCGACAAT
GTTAAAAAGTTGCAAAGACATTTCCAAGCTGACACATACCCATGGATCCAACGGCTGAAG
CAGCAAGAGTTGGTTATTGAGAGACGCCTCTTAAGGATAATGAGAATAGTGGAGGCATTA
GAGAATCGGGGTTATCGTATTCCACTAACGAAGGAGGAAGCTGATCTGTATGAACGACTG
GCTGTTATAGCAAAGCAGCTAAAAGGACCCACTGGTGATCTGCACAGGAGAGTTTATAAT
CTTCTTTCAACTTCTCGCCTTCTTGCTAGTGCTGGTGGCACTGCTGGTCCTATCTATATT
CCTAGCTCAGCGAAAGTTGACGAACAGAGTGTTGCTGAGCTTCTTGAGGCCTTACAACAA
CAGACGGAAGCTGTTGCCAAGTTGGGCAATGTGATGAAAAGAGATACAAGAGACTTGGAA
ATAATACTTTCGGAAGACACGGACATGGCAGAAGACAGTGTTGGGAGAAGGGCATTGAAG
ATGTATAACTAA

Peptide Sequence

PEP ID

Os07t0295400-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:11528034:11533692:1 gene:Os07g0295400 transcript:Os07t0295400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os07t0295400-01);Conserved hypothetical protein. (Os07t0295400-02)
Sequence

MFGTPASSPLFGTPSTTPAFGAPSSTPAFGTPSTNPAFGTPSSTPAFGAPSSTPSFGTPS
TAPAFGTPSSTPAFGAPSSTPAFGAPFSTPAFGVAPSPSPSPFGFQQQMTPSPSPFGFAG
GGGGQITTQMAPVAPLPLSPSDRDIQAIVDAYKEDPGNPRYAFRHLLFSVTEPSQRVKPV
AASDIMWAEAMGKLEGMDSSDRERLWPQLVQGFKDLSYRLKLQDGVLVSDSDRLSMTRDN
VKKLQRHFQADTYPWIQRLKQQELVIERRLLRIMRIVEALENRGYRIPLTKEEADLYERL
AVIAKQLKGPTGDLHRRVYNLLSTSRLLASAGGTAGPIYIPSSAKVDEQSVAELLEALQQ
QTEAVAKLGNVMKRDTRDLEIILSEDTDMAEDSVGRRALKMYN

Transcript Sequence

Transcript ID

Os07t0295400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:11528034:11533692:1 gene:Os07g0295400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os07t0295400-01);Conserved hypothetical protein. (Os07t0295400-02)
Sequence

ACGCCCCGAGAAAACCCTAAACCCCCCAACCCTCGCCGCCGGCAACCGCCGCCGCCATGT
TCGGCACCCCGGCTTCGTCGCCCCTATTTGGGACCCCCTCCACCACCCCGGCATTCGGCG
CCCCTTCCTCCACCCCTGCATTCGGCACGCCCTCCACCAACCCCGCCTTCGGCACCCCTT
CCTCCACGCCGGCGTTCGGCGCGCCGTCGTCCACCCCGTCCTTCGGCACCCCCTCCACCG
CGCCCGCGTTCGGGACCCCGTCCTCGACCCCGGCGTTCGGCGCGCCCTCCTCGACCCCTG
CCTTCGGGGCGCCCTTCTCGACCCCGGCGTTCGGCGTGGCGCCGTCGCCGTCGCCATCGC
CGTTTGGGTTCCAGCAGCAGATGACGCCGTCCCCGTCGCCGTTCGGGTTCGCCGGTGGGG
GCGGCGGGCAGATCACCACCCAGATGGCCCCCGTCGCGCCGCTCCCGCTCTCGCCCTCCG
ACCGTGACATCCAGGCTATCGTGGATGCGTACAAGGAGGATCCTGGAAACCCTCGTTATG
CTTTCAGGCATCTGTTGTTTAGTGTTACAGAGCCTTCACAACGGGTGAAGCCAGTTGCGG
CATCTGATATCATGTGGGCAGAAGCTATGGGGAAGCTTGAGGGCATGGATAGTTCGGATA
GGGAGAGGCTGTGGCCTCAACTCGTGCAGGGATTTAAGGATCTTTCCTACCGGCTTAAGC
TTCAAGATGGAGTTCTTGTCTCAGATTCTGATAGATTGAGCATGACACGCGACAATGTTA
AAAAGTTGCAAAGACATTTCCAAGCTGACACATACCCATGGATCCAACGGCTGAAGCAGC
AAGAGTTGGTTATTGAGAGACGCCTCTTAAGGATAATGAGAATAGTGGAGGCATTAGAGA
ATCGGGGTTATCGTATTCCACTAACGAAGGAGGAAGCTGATCTGTATGAACGACTGGCTG
TTATAGCAAAGCAGCTAAAAGGACCCACTGGTGATCTGCACAGGAGAGTTTATAATCTTC
TTTCAACTTCTCGCCTTCTTGCTAGTGCTGGTGGCACTGCTGGTCCTATCTATATTCCTA
GCTCAGCGAAAGTTGACGAACAGAGTGTTGCTGAGCTTCTTGAGGCCTTACAACAACAGA
CGGAAGCTGTTGCCAAGTTGGGCAATGTGATGAAAAGAGATACAAGAGACTTGGAAATAA
TACTTTCGGAAGACACGGACATGGCAGAAGACAGTGTTGGGAGAAGGGCATTGAAGATGT
ATAACTAAACCAAATTCTTCATTCAATGCATTGACATAAGCAGGAGATCCTTCTTTGGTC
AAGGGTTTAGAGTGTCGGAAAGATGGCAGCCAAACGAACGTTTGACCTTAAACGTCTACC
GTTGCAAACGACTAAACGAGAATTTGTTCTGTTTGGAAGGGCCATAGTGGAATTGGCGGT
TTGTGTTTTGGTGACGGCAAAAACAAGTCACCAGTGTGACAAAATCTGATGTTGGCTGTG
GCAGTTGTGTAAACCACAGCCACCTGCTAAGCCCTCTTAAATTCGTGAGTTAGTCAGAGA
TCGATTGCCTGCATGTAACACTTGTATAATGACATTTTAGATTATTTAGATGAGCGTCTT
TGCGGACTAGATCCGATATATTGTCGCAGATTGTTGTAGGTTTAAACGGAGCTTAGTTTG
GTGATGTGCCCGGGAGGCTGCATGCAAGGTTTCAAAATGCGAAGAGCTAATCG