Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0290800-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:11268929:11273490:1 gene:Os07g0290800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tic22-like family protein. (Os07t0290800-01)
Sequence

ATGCCTTTCCACTTCCAATTCCCATGGCTCCCCAACAACCCCACCTCCTCCTCCTCCTCC
CCAACGAAACCACCTAGCCCTGCAATCCCCAACCCCTTCCTCCCCATCCAGGCCGGCCTC
GCCTCCTTCCTCTCCTCCCTCCCGCTCCCACGCGCGGCCTTCCCGCCGCCGCCCTGGGCT
CGCATCTCCTCCGCCTCAGCCTCCGCGGCCTCGGCCTCGGCTCTCCCCGTGGCGGAGATC
GAGGAGCGGCTCGCGGGGGTCCCCGTGTACGCGCTCGCCAACTCCTCGCAGGAGTTCGTG
CTCGTGTCGTCCGCCCGCGGTGGGGGTGGGGGTGGGGGAGGTGCCCGGGCGGCGGTGCCG
CCGCCGGCGCTCGGGCTCCTGTGCTTCCGGAGGGAGGACGCCGACGCCCTCCTGGCGCAG
ATGGACGGGGACATGGCGGCTGGCTCCACCGTCGTGCCCGTCGCGCTAAACAAGGTTATC
CAACTTAAGTCCGATGGTGTGGCATTTAGATTTGTTCCTGATTCTTCTCAGGTGGCAAAC
GCAATGAAGTTAATGGAAAATGAAGGCCAGTATGTGAATGATGGATTTCCAGGGGTTCCA
GTTTTTCAGTCAAGGAGTCTAGTCCTGATGAGTGATAACAAGAGATATCGTCCAGTTTTC
TTCAGAAAGGAGGACTTGGATAACTCACTACATCGAGCCTCTCGTGACCAGCAAAAGCCT
AACCCTGCTGTAAAAATGGGTGACATTCAGGTTTCTTCTTTGGAGAATATCATCAAATCT
ATGAAGGATAGCTCCTCTTCCAAATGGGATGATGCTGTTTTTATTCCTCCAGGATTTGAT
CTTGCTACTAGTTCAAAGCAATCGAATCATGACAACTAG

Peptide Sequence

PEP ID

Os07t0290800-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:11268929:11273490:1 gene:Os07g0290800 transcript:Os07t0290800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tic22-like family protein. (Os07t0290800-01)
Sequence

MPFHFQFPWLPNNPTSSSSSPTKPPSPAIPNPFLPIQAGLASFLSSLPLPRAAFPPPPWA
RISSASASAASASALPVAEIEERLAGVPVYALANSSQEFVLVSSARGGGGGGGGARAAVP
PPALGLLCFRREDADALLAQMDGDMAAGSTVVPVALNKVIQLKSDGVAFRFVPDSSQVAN
AMKLMENEGQYVNDGFPGVPVFQSRSLVLMSDNKRYRPVFFRKEDLDNSLHRASRDQQKP
NPAVKMGDIQVSSLENIIKSMKDSSSSKWDDAVFIPPGFDLATSSKQSNHDN

Transcript Sequence

Transcript ID

Os07t0290800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:11268929:11273490:1 gene:Os07g0290800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tic22-like family protein. (Os07t0290800-01)
Sequence

ACCGTCGTCTTCCCCGCCGGCCGCCGCTCCCCTCCTCGCCACCGCCGCCATGCCTTTCCA
CTTCCAATTCCCATGGCTCCCCAACAACCCCACCTCCTCCTCCTCCTCCCCAACGAAACC
ACCTAGCCCTGCAATCCCCAACCCCTTCCTCCCCATCCAGGCCGGCCTCGCCTCCTTCCT
CTCCTCCCTCCCGCTCCCACGCGCGGCCTTCCCGCCGCCGCCCTGGGCTCGCATCTCCTC
CGCCTCAGCCTCCGCGGCCTCGGCCTCGGCTCTCCCCGTGGCGGAGATCGAGGAGCGGCT
CGCGGGGGTCCCCGTGTACGCGCTCGCCAACTCCTCGCAGGAGTTCGTGCTCGTGTCGTC
CGCCCGCGGTGGGGGTGGGGGTGGGGGAGGTGCCCGGGCGGCGGTGCCGCCGCCGGCGCT
CGGGCTCCTGTGCTTCCGGAGGGAGGACGCCGACGCCCTCCTGGCGCAGATGGACGGGGA
CATGGCGGCTGGCTCCACCGTCGTGCCCGTCGCGCTAAACAAGGTTATCCAACTTAAGTC
CGATGGTGTGGCATTTAGATTTGTTCCTGATTCTTCTCAGGTGGCAAACGCAATGAAGTT
AATGGAAAATGAAGGCCAGTATGTGAATGATGGATTTCCAGGGGTTCCAGTTTTTCAGTC
AAGGAGTCTAGTCCTGATGAGTGATAACAAGAGATATCGTCCAGTTTTCTTCAGAAAGGA
GGACTTGGATAACTCACTACATCGAGCCTCTCGTGACCAGCAAAAGCCTAACCCTGCTGT
AAAAATGGGTGACATTCAGGTTTCTTCTTTGGAGAATATCATCAAATCTATGAAGGATAG
CTCCTCTTCCAAATGGGATGATGCTGTTTTTATTCCTCCAGGATTTGATCTTGCTACTAG
TTCAAAGCAATCGAATCATGACAACTAGATCTTTATTTATGTTGAAGCTGCTTAACTGCT
CTTGTCATGGAAATGCTTACATGAACATATTGAAGAAATAGAATACATGTTCATACCATA
CTAGCAACTTGATAATGGGTAATGCAATTATAAGTTTGTCGTTCC