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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0290200-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:11241360:11242082:1 gene:Os07g0290200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:non-specific lipid transfer protein d4, lipid transfer protein d4, type D non-specific lipid transfer protein 4 description:Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor domain containing protein. (Os07t0290200-01)
Sequence

ATGGCCAAACAGGCGACAGCTGCGGTGCTCGCCGTCGCGTTGGTGCTCGCGGCGTCGGCG
GGGCTCGCGCACGGCATCTGCAACCTGTCGGACGCGGGGCTCCAGGCGTGCAAGCCGGCG
GCCGCCGTGCGCAACCCGGCGGACACGCCGTCGTCCGAGTGCTGCGACGCGCTGGCCGCC
GCCGACCTGCCGTGCCTGTGCCGGTACAAGGGCTCCGCCGGCGCCCGCGTGTGGGTGAGG
TTCTACGGGATCGACCTCAACCGCGCCATGACGCTGCCGGGCAAGTGCGGCCTCACCTTG
CCGGCGCACTGCTAG

Peptide Sequence

PEP ID

Os07t0290200-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:11241360:11242082:1 gene:Os07g0290200 transcript:Os07t0290200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:non-specific lipid transfer protein d4, lipid transfer protein d4, type D non-specific lipid transfer protein 4 description:Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor domain containing protein. (Os07t0290200-01)
Sequence

MAKQATAAVLAVALVLAASAGLAHGICNLSDAGLQACKPAAAVRNPADTPSSECCDALAA
ADLPCLCRYKGSAGARVWVRFYGIDLNRAMTLPGKCGLTLPAHC

Transcript Sequence

Transcript ID

Os07t0290200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:11241360:11242082:1 gene:Os07g0290200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:non-specific lipid transfer protein d4, lipid transfer protein d4, type D non-specific lipid transfer protein 4 description:Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor domain containing protein. (Os07t0290200-01)
Sequence

ACAAATCACACTAAATAATTACTCAAACCATCATCAGTAACAACCAGATTACAGTATTCA
TTCCCAAACATACAAATCATATCCATGGCCAAACAGGCGACAGCTGCGGTGCTCGCCGTC
GCGTTGGTGCTCGCGGCGTCGGCGGGGCTCGCGCACGGCATCTGCAACCTGTCGGACGCG
GGGCTCCAGGCGTGCAAGCCGGCGGCCGCCGTGCGCAACCCGGCGGACACGCCGTCGTCC
GAGTGCTGCGACGCGCTGGCCGCCGCCGACCTGCCGTGCCTGTGCCGGTACAAGGGCTCC
GCCGGCGCCCGCGTGTGGGTGAGGTTCTACGGGATCGACCTCAACCGCGCCATGACGCTG
CCGGGCAAGTGCGGCCTCACCTTGCCGGCGCACTGCTAGTGCTAGCTAGCTGATGGCAAG
CACAAACTACAGTGCGGCGACCTCGATCGCCATGTTGCTGCAATTCAATTATGCAGTCGT
GACCACTAGCGCTACCAATATATAGCATATATATAGTAGTAATATTAATATATATGTCAT
ACTATGCGATCGATGAGCCCGGCAAGGGGAGATGAATAAATTTGGCAACATATATATGTA
TTTATGCTCTTCTTTCAGTATCATCAAAAGATATGCGTGTGATGAATAGGTTGGGTGTTT
AACCAATAATATATTTGTAATGATACTGATTTGAGTAAAAGAGGAAGTCGTTCTATACTT
TTC