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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0283125-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:10811145:10813161:-1 gene:Os07g0283125 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to lectin-like receptor kinase 7. (Os07t0283125-00)
Sequence

ATGTCCTCCAGTACGTTAGTGCTCCTGCAGCTCCTATACCTTATTAGCCTTATCCTACCA
GCCTTCTCTGCCAACGATGACAACCAATTCGCCTACTCTGGCTTCTCTGGTGCTAACCTG
ACCATGGATGGTGCAACTATCACATCAGGTGGCCTCCTAGAGCTCACCAATGGCACAGTC
CAGCAGAAGGGCCATGCATTCTACCCGGTCCCGTTGCGCTTTGTCCGATCACCCAATGGA
TCAGTGCTCTCCTTCTCGGCATCCTTCGTATTCGCCATCCTATCTGTCTACACTGATCTA
AGTGCTCATGGCATGGCCTTCGTCATTGTGCCAAGCATGAACTTCTCAGCTGCGTTGCCT
GGCCAATTCCTGGGCCTCGCCAACATCCAGAGCAACGGCAATAGCAGCAACCATTTCTTC
GCTGTCGAGCTCGACACCATCCAAAACAAGGAGTTTGGCGACATCAATGCAAACCATGCC
GGCGTCAACATGAACGGTCTCCGATCAGAGCAGTCCTACTACGCCGGCTACTACGATGAC
AAGGATGGTAACTTCCATAACTTGAGCCTGATTAGCCGTGAGGCCATGCAGGTGTGGGTG
GACTACGATAGCAACAACACGCAGATCACTGTGGCCATGGCTCCCATCAAGGTTGCGAGA
CCCATGAAGCCATTGTTCACAGCCAGCTACAACCTCACATCTGTGATTACAGATGTTGCG
TATGTTGGTTTCTCCTCTGCAACTGGCACAATCAACGTGCGGCATTGTGTACTCGGCTGG
AGCTTTGCGATAAATAGTCCTGCTTCAGCCATTAACTTAGGTAAGCTACCAAAGCTGCCA
CGCATGGGCCCAAAGCCACGATCGAAGGTATTGGAGATTGTTCTACCAGTAGCAACGGCA
AGTTTTGTCCTTACTGTGGGCATTATTGGTCTTGTACTCATACGAAGGCATATGAGGTAT
ACAGAACTGCGCGAAGATTGGGAGGTTGAGTTTGGACCGCACCGGTTCTCTTATAAGGAT
CTGTATCATGCAACTGAAGGATTCAAGAATGAGAATCTGCTGGGTGTAGGAGGATTTGGG
AGAGTATATAAGGGTACCCTTCCAGTGTCAAAATTGGAGATTGCAGTAAAGAGGGTGTGT
CATGAATCAAGGCAAGGAATGAAGGAATTTGTTGCCGAGATTGTTAGTATTGGTCGTCTC
CAACACCATAATCTCGTGCAATTACTTGGCTATTGTAGAAGAAGAGGTGAGCTGTTCTTA
GTGTATGACTACATGCCAAATGGAAGTGTTGACAAATACATACATAGTATAGAGGGAAAA
ACCATTCTAACTTGGGCCCAAAGGTGGCATATCATCAAAGGCATTGCATCTTGCTTGGTC
TATCTCCACGAAGAGTGGGAAAAAGCTGTTATCCATCGGGACATAAAAGCTAGTAATGTT
CTTCTTGATGGCGATATGAACGGACGACTTGGTGACTTTGGCCTTGCAAGATTGTATGAT
CATGATGATGACCCACAAACCACGCATGTGGTTGGAACAATAGGATACCTAGCTCCAGAA
CTAGGACACACTAGCAAGGCGACCCCTCTTACTGATGTATTTGCTTTTGGCATGTTTGTT
CTCGAGGTTGCCTGTGGGCAGAGACCCATCAATCAAAGTTCACTTGATAGCCAAACGATG
TTAGTTGACTGGGTGCTTGAGCAATGGAACAAAGGATCACTAGTCAGTACAGTGGATAGC
AGGCTTGAAGGAAATTATAATGTTAGAGAGGCAGTTTTAGCTATAAATCTTGGACTTTTA
TGCTCTCACCCTTTTGCTAATGCAAGGCCTTCTATGCGGCAGGTCATTCATTACCTTGAT
GGTAGCATTCCATTACCAGAGATGTCACCAACAGATTTGAGCTATCATATGATGACAATA
ATGCAAAATGAAGGGTTTGACGAGTACATCATGACAAGTTCATCGATGGTAAGCAATGGC
ACTGCATCTGCCATTTCAAACGGAAGATGA

Peptide Sequence

PEP ID

Os07t0283125-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:10811145:10813161:-1 gene:Os07g0283125 transcript:Os07t0283125-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to lectin-like receptor kinase 7. (Os07t0283125-00)
Sequence

MSSSTLVLLQLLYLISLILPAFSANDDNQFAYSGFSGANLTMDGATITSGGLLELTNGTV
QQKGHAFYPVPLRFVRSPNGSVLSFSASFVFAILSVYTDLSAHGMAFVIVPSMNFSAALP
GQFLGLANIQSNGNSSNHFFAVELDTIQNKEFGDINANHAGVNMNGLRSEQSYYAGYYDD
KDGNFHNLSLISREAMQVWVDYDSNNTQITVAMAPIKVARPMKPLFTASYNLTSVITDVA
YVGFSSATGTINVRHCVLGWSFAINSPASAINLGKLPKLPRMGPKPRSKVLEIVLPVATA
SFVLTVGIIGLVLIRRHMRYTELREDWEVEFGPHRFSYKDLYHATEGFKNENLLGVGGFG
RVYKGTLPVSKLEIAVKRVCHESRQGMKEFVAEIVSIGRLQHHNLVQLLGYCRRRGELFL
VYDYMPNGSVDKYIHSIEGKTILTWAQRWHIIKGIASCLVYLHEEWEKAVIHRDIKASNV
LLDGDMNGRLGDFGLARLYDHDDDPQTTHVVGTIGYLAPELGHTSKATPLTDVFAFGMFV
LEVACGQRPINQSSLDSQTMLVDWVLEQWNKGSLVSTVDSRLEGNYNVREAVLAINLGLL
CSHPFANARPSMRQVIHYLDGSIPLPEMSPTDLSYHMMTIMQNEGFDEYIMTSSSMVSNG
TASAISNGR

Transcript Sequence

Transcript ID

Os07t0283125-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:10811145:10813161:-1 gene:Os07g0283125 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to lectin-like receptor kinase 7. (Os07t0283125-00)
Sequence

ACCATGTCCTCCAGTACGTTAGTGCTCCTGCAGCTCCTATACCTTATTAGCCTTATCCTA
CCAGCCTTCTCTGCCAACGATGACAACCAATTCGCCTACTCTGGCTTCTCTGGTGCTAAC
CTGACCATGGATGGTGCAACTATCACATCAGGTGGCCTCCTAGAGCTCACCAATGGCACA
GTCCAGCAGAAGGGCCATGCATTCTACCCGGTCCCGTTGCGCTTTGTCCGATCACCCAAT
GGATCAGTGCTCTCCTTCTCGGCATCCTTCGTATTCGCCATCCTATCTGTCTACACTGAT
CTAAGTGCTCATGGCATGGCCTTCGTCATTGTGCCAAGCATGAACTTCTCAGCTGCGTTG
CCTGGCCAATTCCTGGGCCTCGCCAACATCCAGAGCAACGGCAATAGCAGCAACCATTTC
TTCGCTGTCGAGCTCGACACCATCCAAAACAAGGAGTTTGGCGACATCAATGCAAACCAT
GCCGGCGTCAACATGAACGGTCTCCGATCAGAGCAGTCCTACTACGCCGGCTACTACGAT
GACAAGGATGGTAACTTCCATAACTTGAGCCTGATTAGCCGTGAGGCCATGCAGGTGTGG
GTGGACTACGATAGCAACAACACGCAGATCACTGTGGCCATGGCTCCCATCAAGGTTGCG
AGACCCATGAAGCCATTGTTCACAGCCAGCTACAACCTCACATCTGTGATTACAGATGTT
GCGTATGTTGGTTTCTCCTCTGCAACTGGCACAATCAACGTGCGGCATTGTGTACTCGGC
TGGAGCTTTGCGATAAATAGTCCTGCTTCAGCCATTAACTTAGGTAAGCTACCAAAGCTG
CCACGCATGGGCCCAAAGCCACGATCGAAGGTATTGGAGATTGTTCTACCAGTAGCAACG
GCAAGTTTTGTCCTTACTGTGGGCATTATTGGTCTTGTACTCATACGAAGGCATATGAGG
TATACAGAACTGCGCGAAGATTGGGAGGTTGAGTTTGGACCGCACCGGTTCTCTTATAAG
GATCTGTATCATGCAACTGAAGGATTCAAGAATGAGAATCTGCTGGGTGTAGGAGGATTT
GGGAGAGTATATAAGGGTACCCTTCCAGTGTCAAAATTGGAGATTGCAGTAAAGAGGGTG
TGTCATGAATCAAGGCAAGGAATGAAGGAATTTGTTGCCGAGATTGTTAGTATTGGTCGT
CTCCAACACCATAATCTCGTGCAATTACTTGGCTATTGTAGAAGAAGAGGTGAGCTGTTC
TTAGTGTATGACTACATGCCAAATGGAAGTGTTGACAAATACATACATAGTATAGAGGGA
AAAACCATTCTAACTTGGGCCCAAAGGTGGCATATCATCAAAGGCATTGCATCTTGCTTG
GTCTATCTCCACGAAGAGTGGGAAAAAGCTGTTATCCATCGGGACATAAAAGCTAGTAAT
GTTCTTCTTGATGGCGATATGAACGGACGACTTGGTGACTTTGGCCTTGCAAGATTGTAT
GATCATGATGATGACCCACAAACCACGCATGTGGTTGGAACAATAGGATACCTAGCTCCA
GAACTAGGACACACTAGCAAGGCGACCCCTCTTACTGATGTATTTGCTTTTGGCATGTTT
GTTCTCGAGGTTGCCTGTGGGCAGAGACCCATCAATCAAAGTTCACTTGATAGCCAAACG
ATGTTAGTTGACTGGGTGCTTGAGCAATGGAACAAAGGATCACTAGTCAGTACAGTGGAT
AGCAGGCTTGAAGGAAATTATAATGTTAGAGAGGCAGTTTTAGCTATAAATCTTGGACTT
TTATGCTCTCACCCTTTTGCTAATGCAAGGCCTTCTATGCGGCAGGTCATTCATTACCTT
GATGGTAGCATTCCATTACCAGAGATGTCACCAACAGATTTGAGCTATCATATGATGACA
ATAATGCAAAATGAAGGGTTTGACGAGTACATCATGACAAGTTCATCGATGGTAAGCAAT
GGCACTGCATCTGCCATTTCAAACGGAAGATGACATG