Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0281000-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:10678739:10683090:-1 gene:Os07g0281000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 49 description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os07t0281000-01)
Sequence	ATGGCCCACCGGCTGCTGCGGGACGCGCAGGCGGACGGGTGGGAGCGTTCCGACTTCCCC ATCATCTGCGAGTCCTGCCTCGGCGACAACCCCTACGTTCGCATGTTAAGAGCAGAATAC GATAAAGAGTGCAAAATATGTGCACGTCCTTTTACTGTCTTCCGTTGGCGACCTGGCCGG GATGCAAGGTACAAGAAGACAGAGATCTGCCAGACTTGTTGCAAACTGAAAAATGTCTGC CAGGTCTGCCTTCTAGATCTTGAATATGGTCTGCCGGTCCAGGTCAGGGATACAGCACTT TCTACTAATTCAAACGATGCAATCCCAAGGAGTGACGTGAACCGCGAGTACTTTGCAGAA GAGCATGATCGCAGGGCCAGAGCTGGAATTGATTATGACTCTTCCAATGGTAAGGCACGT GCCAACGACACCATTCTGAAACTCCAGAGAACAGCGCCATATTACAAGAGGAATCGAGCC CATGTCTGTAGTTTCTATGTGCGTGGTGAATGTACAAGAGGTGCTGAATGCCCTTATCGA CATGAGATGCCTGAAACTGGAGAGTTATCTCAGCAGAACATCAAAGATCGTTACTACGGA GTTAACGATCCAGTTGCTTTGAAGCTTTTGAGTAAGGCTGGTGAGATGCCATCCCTGACA CCCCCAGATGATGAGAGTATAAGGACACTTTACATTGGTGGCCTTGATAGTCGAGTCACT GAGCAGGATTTGAGGGATCAATTTTATGCCCATGGTGAGATTGAGACCATAAGAATGGTT CTGCAGCGTGCTTGTGCATTTGTGACTTACACTACAAGAGAAGGTGCTGAGAAAGCTGCA GAGGAGCTCGCTAACAAGTTAGTCATCAAGGGTGTGCGTCTGAAGCTCATGTGGGGCAAG CCTCAAGCACCAAAACCGGAGGAAGATGAAGCTGGGAGGCAAGGGCATGTTGCACATGGA GGAATGCTCCCTAGGGCTGTAATATCTCAGCAGCAGAGTGGTGACCAGCCTCAACCTCCT GGGATGGAAGGCCAGCAGCAACCTGCTTCGGCATCATACTACTTCAACATTCCAGCACCG CCAGCGGCAGAGCGGACACTGTACCCTTCGATGGATCCCCAGAGGATGGGTGCCTTGGTC GAGTCACAGGAGGGCGATGGCAAACCAGGTCCACAGCAGGCTGGGCAAGGTCAGGCATCA AGCAGCTCAGGACAGAGTTATCCTGAGCCGCCACCACCATATTACCATGGTGGTCAGTAT CCCCCCTACTATCCACCTTATGGCGGTTACATGCCCCCACCTCGCATGCCATACCAGCAG CCACCACAGTACCCAGCTTATCAACCTATGCTGGCACCACCAGCACAGTCGCAAGCTAGC TCATTGCAACAACCAGCACCGGCAACGCAGCAGCTGGGTCAAGGCCCTCAGCAACAGACA ACCCAGAACGGAATGACTTAA

Peptide Sequence

PEP ID	Os07t0281000-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:10678739:10683090:-1 gene:Os07g0281000 transcript:Os07t0281000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 49 description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os07t0281000-01)
Sequence	MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSTNSNDAIPRSDVNREYFAE EHDRRARAGIDYDSSNGKARANDTILKLQRTAPYYKRNRAHVCSFYVRGECTRGAECPYR HEMPETGELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLTPPDDESIRTLYIGGLDSRVT EQDLRDQFYAHGEIETIRMVLQRACAFVTYTTREGAEKAAEELANKLVIKGVRLKLMWGK PQAPKPEEDEAGRQGHVAHGGMLPRAVISQQQSGDQPQPPGMEGQQQPASASYYFNIPAP PAAERTLYPSMDPQRMGALVESQEGDGKPGPQQAGQGQASSSSGQSYPEPPPPYYHGGQY PPYYPPYGGYMPPPRMPYQQPPQYPAYQPMLAPPAQSQASSLQQPAPATQQLGQGPQQQT TQNGMT

Transcript Sequence

Transcript ID	Os07t0281000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:10678739:10683090:-1 gene:Os07g0281000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 49 description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os07t0281000-01)
Sequence	CTCTCTCTCTCTCTCTCTCTCTCTTTCCCTCTCGACGGCAGCGGCGGCTTCGGCGGCGCG GCGGAGGCGGAGATGGCCCACCGGCTGCTGCGGGACGCGCAGGCGGACGGGTGGGAGCGT TCCGACTTCCCCATCATCTGCGAGTCCTGCCTCGGCGACAACCCCTACGTTCGCATGTTA AGAGCAGAATACGATAAAGAGTGCAAAATATGTGCACGTCCTTTTACTGTCTTCCGTTGG CGACCTGGCCGGGATGCAAGGTACAAGAAGACAGAGATCTGCCAGACTTGTTGCAAACTG AAAAATGTCTGCCAGGTCTGCCTTCTAGATCTTGAATATGGTCTGCCGGTCCAGGTCAGG GATACAGCACTTTCTACTAATTCAAACGATGCAATCCCAAGGAGTGACGTGAACCGCGAG TACTTTGCAGAAGAGCATGATCGCAGGGCCAGAGCTGGAATTGATTATGACTCTTCCAAT GGTAAGGCACGTGCCAACGACACCATTCTGAAACTCCAGAGAACAGCGCCATATTACAAG AGGAATCGAGCCCATGTCTGTAGTTTCTATGTGCGTGGTGAATGTACAAGAGGTGCTGAA TGCCCTTATCGACATGAGATGCCTGAAACTGGAGAGTTATCTCAGCAGAACATCAAAGAT CGTTACTACGGAGTTAACGATCCAGTTGCTTTGAAGCTTTTGAGTAAGGCTGGTGAGATG CCATCCCTGACACCCCCAGATGATGAGAGTATAAGGACACTTTACATTGGTGGCCTTGAT AGTCGAGTCACTGAGCAGGATTTGAGGGATCAATTTTATGCCCATGGTGAGATTGAGACC ATAAGAATGGTTCTGCAGCGTGCTTGTGCATTTGTGACTTACACTACAAGAGAAGGTGCT GAGAAAGCTGCAGAGGAGCTCGCTAACAAGTTAGTCATCAAGGGTGTGCGTCTGAAGCTC ATGTGGGGCAAGCCTCAAGCACCAAAACCGGAGGAAGATGAAGCTGGGAGGCAAGGGCAT GTTGCACATGGAGGAATGCTCCCTAGGGCTGTAATATCTCAGCAGCAGAGTGGTGACCAG CCTCAACCTCCTGGGATGGAAGGCCAGCAGCAACCTGCTTCGGCATCATACTACTTCAAC ATTCCAGCACCGCCAGCGGCAGAGCGGACACTGTACCCTTCGATGGATCCCCAGAGGATG GGTGCCTTGGTCGAGTCACAGGAGGGCGATGGCAAACCAGGTCCACAGCAGGCTGGGCAA GGTCAGGCATCAAGCAGCTCAGGACAGAGTTATCCTGAGCCGCCACCACCATATTACCAT GGTGGTCAGTATCCCCCCTACTATCCACCTTATGGCGGTTACATGCCCCCACCTCGCATG CCATACCAGCAGCCACCACAGTACCCAGCTTATCAACCTATGCTGGCACCACCAGCACAG TCGCAAGCTAGCTCATTGCAACAACCAGCACCGGCAACGCAGCAGCTGGGTCAAGGCCCT CAGCAACAGACAACCCAGAACGGAATGACTTAATCTTTTATTGGTAATGTTGTATTCCTG GAATCTGTTCTGTGGGAGATTGTAACCCTTGTTGGTAACCGGTTTTTGTATGTTCTAATT TGTGATTAGCAGTAAAACTACCCAGTATTGCTTATCTGAA