Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0280200-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:10636445:10642943:1 gene:Os07g0280200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:acyl-CoA synthetase 7 description:AMP-dependent synthetase and ligase domain containing protein. (Os07t0280200-01)
Sequence	ATGGCAGCTCCCACCTCCATGGCGAACGCGGATGGCGAGAGCACGCGCACCGGCTACTGC GCCGCGACCAAGTCGTTCCGCAGCCTCCGGCCGCCGGTGCCGCTGCCTCCGCCGGACGTC CCGCTCTCCTTCCCGGAGTTCGCGTTCTCGCTGCTGCCGCGGTCGTCGTCGTCGTCGTCG TCGTCTCTTCTCCCGGCGAACCCGGCGCTCGTCGACGCGGCCACTGGCGAGGCCGTCTCG TTCCAGGCGTTCCTGTCGCGGGTGCGCGCGCTCGCCGGAGCCCTCCGCTCGCGCGTCGGG CTGCGCGGCGGCGACGTCGCGTTCGTGCTCGCGCCCGCAGGGCTCGACGTGCCCGTGCTG TACTTCGCGCTCCTCTCCATCGGCGCCGTCGTGTCCCCCGCCAACCCGGCCCTCACCCCC GCCGAGGTTTCCCGCCTCGTCTCCCTCTCCGGCGCATCCGTCGCCTTCGCCGTCTCGTCC ACAGCCACCAAGCTCCCCGCTGGCCTCACCACCGTCGTCCTCCTCGACTCGCCACACTTC CGCTCCCTCTTGATGGATTGCGGCCAAGCCCAAGGACAGGAGCCGCTGCCGGTGGTGGTG GTGCGGCAGTCGGAGACGGCGGCGATCCAGTACTCCTCGGGGACGACGGGGCGGGTGAAG GCGGCGGCGCTGCCTCACCGGAGCTTCATCGCCATGGTGGCAGGGTTCCACGCGCTGCGG GCCAAGGCTCGGGAGGTCAGGACGCTGCTCGGTGCCCCGATGTTCCACTCCATGGGGTTC TTGTTCGTGCTGCAGGGCGTCGCGCTGGGGGCGACGACGGTGGTGGTGACGGACGCGGTG GCGCGGGCCGGGATACGGGGGCTCGTGGAGGCGGCGGAGCGTTGGGCGGTCATGGACATG ACGGCCTCGCCGCCGGTGGTGCTGGGGATGACCAAGCAGAGGTGCCGGCTGCCGGCGCTG GAGCGGATAACCTGCGGCGGCGCCCCGCTGCCGGCGCCGGCGATCGAACGGTTCCGCCGG CGATTCCCCCACGTCGATTTGTGCATGGGTTATGGATCAACCGAGGCAGGTGGCATATCA AGGATGATCAGCCAGGAAGAGTGCAACCACATAGGCTCTGCTGGCCGTGTCACTGAGAAT GTCGAGGTAAAGATTGTTGACCATGTAACAGGCAAGCCATTGCCTGCCGGGCAGCAAGGG GAGCTTTGGGTGAGAGGGCCTGCCGTCATGACAGGTTACGTGGGTGACAACGAGGCCAAT GCAACCACCTTTAATTCTGAAGGATGGCTGAAAACTGGTGACCTTTGCTATATTGATCAG GACGGGTTTCTTTTTGTAGTTGACAGGCTAAAGGAACTGATTAAATACAAGGCCTACCAG GTACCACCTGCAGAGCTGGAGCTTGTCCTGCATTCTTTGCCACAAATTGTTGATGCTGCA GTTATGCCGTATCCTCACGAAGAAGCAGGGCAGATACCAGTAGCACTTGTCGTAAAGCAA CCAGGAAGCAAGCTTACTGAAGCAGAAGTCATGTACAATGTCGCCAAGCAGGTAGCTCCA TACAAGAAGATCCGGAAAGTGCTGTTTGTTGACTCCATACCCAAATCGCCATCTGGGAAG ATCTTGAGAAGGGAATTGGTAAATCATCTGCGGTTGTGTGAATTGTCGAGATTGTGA

Peptide Sequence

PEP ID	Os07t0280200-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:10636445:10642943:1 gene:Os07g0280200 transcript:Os07t0280200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:acyl-CoA synthetase 7 description:AMP-dependent synthetase and ligase domain containing protein. (Os07t0280200-01)
Sequence	MAAPTSMANADGESTRTGYCAATKSFRSLRPPVPLPPPDVPLSFPEFAFSLLPRSSSSSS SSLLPANPALVDAATGEAVSFQAFLSRVRALAGALRSRVGLRGGDVAFVLAPAGLDVPVL YFALLSIGAVVSPANPALTPAEVSRLVSLSGASVAFAVSSTATKLPAGLTTVVLLDSPHF RSLLMDCGQAQGQEPLPVVVVRQSETAAIQYSSGTTGRVKAAALPHRSFIAMVAGFHALR AKAREVRTLLGAPMFHSMGFLFVLQGVALGATTVVVTDAVARAGIRGLVEAAERWAVMDM TASPPVVLGMTKQRCRLPALERITCGGAPLPAPAIERFRRRFPHVDLCMGYGSTEAGGIS RMISQEECNHIGSAGRVTENVEVKIVDHVTGKPLPAGQQGELWVRGPAVMTGYVGDNEAN ATTFNSEGWLKTGDLCYIDQDGFLFVVDRLKELIKYKAYQVPPAELELVLHSLPQIVDAA VMPYPHEEAGQIPVALVVKQPGSKLTEAEVMYNVAKQVAPYKKIRKVLFVDSIPKSPSGK ILRRELVNHLRLCELSRL

Transcript Sequence

Transcript ID	Os07t0280200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:10636445:10642943:1 gene:Os07g0280200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:acyl-CoA synthetase 7 description:AMP-dependent synthetase and ligase domain containing protein. (Os07t0280200-01)
Sequence	GAAGAGAAAAAATAATAATGGCAGCTCCCACCTCCATGGCGAACGCGGATGGCGAGAGCA CGCGCACCGGCTACTGCGCCGCGACCAAGTCGTTCCGCAGCCTCCGGCCGCCGGTGCCGC TGCCTCCGCCGGACGTCCCGCTCTCCTTCCCGGAGTTCGCGTTCTCGCTGCTGCCGCGGT CGTCGTCGTCGTCGTCGTCGTCTCTTCTCCCGGCGAACCCGGCGCTCGTCGACGCGGCCA CTGGCGAGGCCGTCTCGTTCCAGGCGTTCCTGTCGCGGGTGCGCGCGCTCGCCGGAGCCC TCCGCTCGCGCGTCGGGCTGCGCGGCGGCGACGTCGCGTTCGTGCTCGCGCCCGCAGGGC TCGACGTGCCCGTGCTGTACTTCGCGCTCCTCTCCATCGGCGCCGTCGTGTCCCCCGCCA ACCCGGCCCTCACCCCCGCCGAGGTTTCCCGCCTCGTCTCCCTCTCCGGCGCATCCGTCG CCTTCGCCGTCTCGTCCACAGCCACCAAGCTCCCCGCTGGCCTCACCACCGTCGTCCTCC TCGACTCGCCACACTTCCGCTCCCTCTTGATGGATTGCGGCCAAGCCCAAGGACAGGAGC CGCTGCCGGTGGTGGTGGTGCGGCAGTCGGAGACGGCGGCGATCCAGTACTCCTCGGGGA CGACGGGGCGGGTGAAGGCGGCGGCGCTGCCTCACCGGAGCTTCATCGCCATGGTGGCAG GGTTCCACGCGCTGCGGGCCAAGGCTCGGGAGGTCAGGACGCTGCTCGGTGCCCCGATGT TCCACTCCATGGGGTTCTTGTTCGTGCTGCAGGGCGTCGCGCTGGGGGCGACGACGGTGG TGGTGACGGACGCGGTGGCGCGGGCCGGGATACGGGGGCTCGTGGAGGCGGCGGAGCGTT GGGCGGTCATGGACATGACGGCCTCGCCGCCGGTGGTGCTGGGGATGACCAAGCAGAGGT GCCGGCTGCCGGCGCTGGAGCGGATAACCTGCGGCGGCGCCCCGCTGCCGGCGCCGGCGA TCGAACGGTTCCGCCGGCGATTCCCCCACGTCGATTTGTGCATGGGTTATGGATCAACCG AGGCAGGTGGCATATCAAGGATGATCAGCCAGGAAGAGTGCAACCACATAGGCTCTGCTG GCCGTGTCACTGAGAATGTCGAGGTAAAGATTGTTGACCATGTAACAGGCAAGCCATTGC CTGCCGGGCAGCAAGGGGAGCTTTGGGTGAGAGGGCCTGCCGTCATGACAGGTTACGTGG GTGACAACGAGGCCAATGCAACCACCTTTAATTCTGAAGGATGGCTGAAAACTGGTGACC TTTGCTATATTGATCAGGACGGGTTTCTTTTTGTAGTTGACAGGCTAAAGGAACTGATTA AATACAAGGCCTACCAGGTACCACCTGCAGAGCTGGAGCTTGTCCTGCATTCTTTGCCAC AAATTGTTGATGCTGCAGTTATGCCGTATCCTCACGAAGAAGCAGGGCAGATACCAGTAG CACTTGTCGTAAAGCAACCAGGAAGCAAGCTTACTGAAGCAGAAGTCATGTACAATGTCG CCAAGCAGGTAGCTCCATACAAGAAGATCCGGAAAGTGCTGTTTGTTGACTCCATACCCA AATCGCCATCTGGGAAGATCTTGAGAAGGGAATTGGTAAATCATCTGCGGTTGTGTGAAT TGTCGAGATTGTGACTGTGCGAGTGTTGTACCCTATAGTTCAATTCTTGTGTCAAAAAGG