Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0275300-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:10274229:10277895:1 gene:Os07g0275300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0275300-01)
Sequence

ATGCCGGAGAGGTCCGAGCTGGGGCGGCAGCTCCCGCTGAGAGGGCCCCTCAAGGCACTG
GAGGCCGACATCCACCATGCCAACACCATGGCTAATGCTATCCAGAGGAACTATGGTGGA
GCATGTGTGCAGATGAGGTTGTCGTGCAGCTCACTGGCGCCATTCTTTCTTTACCTCATC
CAGTGGCTGGATTGTGGCTGCTGTTATGCTCTTCCCAGTTATCTAGGCCTTTTTCACATT
CTCATTTGCAAGGTTTATGCAGATGGAGATAGCTCAGTATCAACGTATGAAAGGCGTGCA
AGCCTTAGAGAATTCTATGCGATCATCTACCCTATCCTTCAACAGCTTGAGGGTAGTTTG
ATTGAGAGGGACCTGAAAGGGAAAGGGCGATGTAAAGACATAGTGAGTAGGAAGCGGCTC
GAAGATTGGAGGAAGCTTTGTAACAAGGATGTGGAAAGGGAGGATGAATGTGGGATTTGC
ATGGAGACATGCACCAAGATGGTTCTGCCTAATTGCAGTCATGCAATGTGCATAAAATGC
TACAGGGACTGGTATAGAAGATCAGAGTCTTGCCCTTTCTGCCGAGGAAGCCTTAAACGA
ATTCGCTCAAGAGACCTGTGGGTGCTCACAAATTACAATGATGTGGTTGATCCTGTAACT
CTAGAAAGAGAAAATGTGAGGCATTTCTACAGTTATATTGATAGTTTGCCTCTTATACTT
CCAGATAATATTTTCTTCTTCTACTATGATTACCTACTCTAA

Peptide Sequence

PEP ID

Os07t0275300-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:10274229:10277895:1 gene:Os07g0275300 transcript:Os07t0275300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0275300-01)
Sequence

MPERSELGRQLPLRGPLKALEADIHHANTMANAIQRNYGGACVQMRLSCSSLAPFFLYLI
QWLDCGCCYALPSYLGLFHILICKVYADGDSSVSTYERRASLREFYAIIYPILQQLEGSL
IERDLKGKGRCKDIVSRKRLEDWRKLCNKDVEREDECGICMETCTKMVLPNCSHAMCIKC
YRDWYRRSESCPFCRGSLKRIRSRDLWVLTNYNDVVDPVTLERENVRHFYSYIDSLPLIL
PDNIFFFYYDYLL

Transcript Sequence

Transcript ID

Os07t0275300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:10274229:10277895:1 gene:Os07g0275300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0275300-01)
Sequence

ACTTCCCCCATTCCATTCCATTCCATTCCTTTCCTTTCTCTCTCCTCCCCCTCGCGCCAT
TAAGGCTCCAGAGCTTTCTCCCTCTTCACTTGGGGGGGACTGGAAGAAGAGGAGGAGCTC
GGCTCGAGGCCCCAAGAATCGAGTTCGTCGGAGGCGGCGGATGCCGGAGAGGTCCGAGCT
GGGGCGGCAGCTCCCGCTGAGAGGGCCCCTCAAGGCACTGGAGGCCGACATCCACCATGC
CAACACCATGGCTAATGCTATCCAGAGGAACTATGGTGGAGCATGTGTGCAGATGAGGTT
GTCGTGCAGCTCACTGGCGCCATTCTTTCTTTACCTCATCCAGTGGCTGGATTGTGGCTG
CTGTTATGCTCTTCCCAGTTATCTAGGCCTTTTTCACATTCTCATTTGCAAGGTTTATGC
AGATGGAGATAGCTCAGTATCAACGTATGAAAGGCGTGCAAGCCTTAGAGAATTCTATGC
GATCATCTACCCTATCCTTCAACAGCTTGAGGGTAGTTTGATTGAGAGGGACCTGAAAGG
GAAAGGGCGATGTAAAGACATAGTGAGTAGGAAGCGGCTCGAAGATTGGAGGAAGCTTTG
TAACAAGGATGTGGAAAGGGAGGATGAATGTGGGATTTGCATGGAGACATGCACCAAGAT
GGTTCTGCCTAATTGCAGTCATGCAATGTGCATAAAATGCTACAGGGACTGGTATAGAAG
ATCAGAGTCTTGCCCTTTCTGCCGAGGAAGCCTTAAACGAATTCGCTCAAGAGACCTGTG
GGTGCTCACAAATTACAATGATGTGGTTGATCCTGTAACTCTAGAAAGAGAAAATGTGAG
GCATTTCTACAGTTATATTGATAGTTTGCCTCTTATACTTCCAGATAATATTTTCTTCTT
CTACTATGATTACCTACTCTAATCTGGAAACACCACAAGTTGTGTGTGTGAAATTATGAA
AGCGGAGAAAGCCATTTGTAGATTTTTCTTTGTTAGAGCTTAGAAGGATGGTCTTTCCAC
CTCTGACAAAACACCTTTTACTTTAGTGTAGCTGCATAACACTTCTAAAGCAACTGTAAA
TAAAATCTGCAGGTGAAGTTCATTGT