Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0275100-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:10264253:10265311:1 gene:Os07g0275100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os07t0275100-00)
Sequence

ATGAAGCTATCCCAAAATTTTAGAATTATGAATGTGATTATCCTTGCCTTGATCACTACT
ACTATATGTCATCATAAAATCATTTTTTTTCTTTTGGAAACTGCAACCAAACTAAATATT
TTTGCAGTTCCCAGGAGGAATGTACTATCCACAATGCTATCCACTTCAACAGTCATCCTC
TTCGGATCAAAACAAATCACACTAGCGGAGATAACCGGTGCCACATTCAGGGAGTACATT
GACACATTTGATGGCTACTCCTTCCTCTACCCTAAAAGCTGGATCCAGGTCCGAGGAGCC
GGTGCCGACATATTCTTCAGAGACCCTTTTGTCCTTGATGAGAACATGTCAGTCGAGATA
TCGTCTCCTTCATCGTCAAAGTATGTGACGGTTGAAGATCTTGGCCCCCCTGAGAAGGCT
GCAGAGAGAGTGCTGCAACAGTACTTGACAGAGTTCATGTCGACCAGGCTGGGCGTTCGA
CGAACCTCGAACATCCTGTCAGCATCGTCGAAGGTTGCTGACGATGGCAAGCTCTACTAT
GAAGTTGAGGTGAACATAAAGTCTTTTGCCAGCAACAACGAGCTGGCGGTGATGCCGCAA
GACAGGGTGCAGCGGCTGGAGTGGGACCGGCGCTACCTGTCGGTGCTCGGCGTCGAGAAC
AAGCGGCTGTACGAGCTCCGGCTGCAGTCGCCGGAGCAGGTGTTCAAGGAGGAAGAAGGT
GACCTGAGGAGAGTCATGGACTCTTTCAGGGTCAACAAGACGGTATAG

Peptide Sequence

PEP ID

Os07t0275100-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:10264253:10265311:1 gene:Os07g0275100 transcript:Os07t0275100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os07t0275100-00)
Sequence

MKLSQNFRIMNVIILALITTTICHHKIIFFLLETATKLNIFAVPRRNVLSTMLSTSTVIL
FGSKQITLAEITGATFREYIDTFDGYSFLYPKSWIQVRGAGADIFFRDPFVLDENMSVEI
SSPSSSKYVTVEDLGPPEKAAERVLQQYLTEFMSTRLGVRRTSNILSASSKVADDGKLYY
EVEVNIKSFASNNELAVMPQDRVQRLEWDRRYLSVLGVENKRLYELRLQSPEQVFKEEEG
DLRRVMDSFRVNKTV

Transcript Sequence

Transcript ID

Os07t0275100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:10264253:10265311:1 gene:Os07g0275100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os07t0275100-00)
Sequence

ATGAAGCTATCCCAAAATTTTAGAATTATGAATGTGATTATCCTTGCCTTGATCACTACT
ACTATATGTCATCATAAAATCATTTTTTTTCTTTTGGAAACTGCAACCAAACTAAATATT
TTTGCAGTTCCCAGGAGGAATGTACTATCCACAATGCTATCCACTTCAACAGTCATCCTC
TTCGGATCAAAACAAATCACACTAGCGGAGATAACCGGTGCCACATTCAGGGAGTACATT
GACACATTTGATGGCTACTCCTTCCTCTACCCTAAAAGCTGGATCCAGGTCCGAGGAGCC
GGTGCCGACATATTCTTCAGAGACCCTTTTGTCCTTGATGAGAACATGTCAGTCGAGATA
TCGTCTCCTTCATCGTCAAAGTATGTGACGGTTGAAGATCTTGGCCCCCCTGAGAAGGCT
GCAGAGAGAGTGCTGCAACAGTACTTGACAGAGTTCATGTCGACCAGGCTGGGCGTTCGA
CGAACCTCGAACATCCTGTCAGCATCGTCGAAGGTTGCTGACGATGGCAAGCTCTACTAT
GAAGTTGAGGTGAACATAAAGTCTTTTGCCAGCAACAACGAGCTGGCGGTGATGCCGCAA
GACAGGGTGCAGCGGCTGGAGTGGGACCGGCGCTACCTGTCGGTGCTCGGCGTCGAGAAC
AAGCGGCTGTACGAGCTCCGGCTGCAGTCGCCGGAGCAGGTGTTCAAGGAGGAAGAAGGT
GACCTGAGGAGAGTCATGGACTCTTTCAGGGTCAACAAGACGGTATAGCAGTAAAGATGC
AGATGGAGCACAGCAGGTAGTGCTTTATCTAGTTGAGAACAGAATTTTTTGTATAGCAGA
TTATTTATTCCCTTCATTATTCTTTCACTTCTTTTTTGTTATCTTGTATAATATTATCAT
ATACAGTACCTTGTGTG