Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0274800-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:10247753:10252401:1 gene:Os07g0274800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein phosphatase 2A B' regulatory subunit. (Os07t0274800-01);Similar to Protein phosphatase 2A B' regulatory subunit. (Os07t0274800-02)
Sequence

ATGATGAAGCAAATATTTGGGCGGCGGAAGAATGCCAAGTCAGCTGATAAGGATTTCTTT
TCTGGGACGAGCCCTTCCGTGTTGGACCAGGTTTCAGGTCTCGGAGTTGCTGATAGGGCC
ACGTCTAACTTGGGTAGCCAACCGCCAATTATCTCTAGTACTGGGCTCAGCTATGGGAGT
GGAAACCGTGTAGAGAATCCAAACACAAGGACAAATGGCAATTTGTATTCTTCTAGCTTT
CAACCGTTGCCGAGCTTTAAAGATGTGCCAAATTCGGAGAAACAGAATCTGCTGATCAGA
AAGTTAAAATTGTGCTGCATTGTGTTTGACTTTACTGATCCGACAAAGAACATACAGGAG
AAGGAAATGAAAAGCCAAACTCTGTTGGAAATTGTCGATTATGTTGTGTCTGCCACTGTT
AAGTTTCCTGAAATAGTTATGCTGGAAATTACAAGAATGATTTCAGCAAACTTATTCAGG
ACACTAATTTCTCCACCCAGAGAGAAAAAGGTGCTTCAAGCTTTTGATTTAGAAGAGGAT
GAAGCAGTGATGGATCCTGCATGGTCACACTTGCAGATTGTCTATGAGTTGCTATTGAAA
TTTATTCAATCTCCAGAAACAGATGCCAAATTAGCTAAGAGATATATCGACCATTCCTTC
ATTTTAAGACTACTTGACATCTTTGACTCAGAAGACCCTAGGGAGAGGGAGTACTTAAAG
ATGACACTTCATCGTATCTATGGAAAGTTCATGGTGTATCGGCCATTTATTAGAAAAGCT
ATCAATAATATATTCTACCAGTTCATCTATGAAACTGAAAAACACAATGGCATAGCTGAG
CTCTTGGAAATTTTAGGAAGTATCATCAATGGATTTGCTTTACCACTCAAGGAAGAGCAT
AAGTTGTTCCTGGTACGGACCTTAATTCCACTTCACAAGCCAAAGTGCATCGCACTGTAC
CATCAACAGTTGTCTTACAGCATCACACAGTTTGTTGAAAAAGATTGCAAGCTCGCAGAT
ACTGTTATCAGAGGCCTCATAAAATACTGGCCTATCACAAACAGCACAAAGGAGGTGATG
TTTTTGGGGGAATTGGAGGAGATACTCGATGCAACCCAACCTGCAGAGTTCCAAAAATGT
ATGGTTCCCCTTTTCCGCCAGATTGCATGCTGCCTTAATAGTTCTCACTTTCAGGTTGCC
GAGAGGGCATTGTTTTTGTGGAACAACGACCACATTGAGAATTTAATTAGACAAAACAGT
AAGGTGATATTGCCTATCATCTTTTCTGCACTGGAGAAAAATGTAATTGAGCACTGGAAC
CAGGCTGTCAAAAGTCTCTCTCTTAACGTACAAAAGTTATTCTCTGATCGTGACCCTGAA
CTTTACAAAGAATGTTTGAGGAAGTATGAGGAAAACAAAGCTAAAGAAAAGGATCATAAA
TTGAAGCAAGAATCTGTATGGAAACGCCTAGAAGAGGTTGCATCAGCAAAAGCCACAAGT
GGCGAGGCCGTCCTCATCTCTCCATCCCTTGCTCGCACATCATCACTTGTGTAG

Peptide Sequence

PEP ID

Os07t0274800-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:10247753:10252401:1 gene:Os07g0274800 transcript:Os07t0274800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein phosphatase 2A B' regulatory subunit. (Os07t0274800-01);Similar to Protein phosphatase 2A B' regulatory subunit. (Os07t0274800-02)
Sequence

MMKQIFGRRKNAKSADKDFFSGTSPSVLDQVSGLGVADRATSNLGSQPPIISSTGLSYGS
GNRVENPNTRTNGNLYSSSFQPLPSFKDVPNSEKQNLLIRKLKLCCIVFDFTDPTKNIQE
KEMKSQTLLEIVDYVVSATVKFPEIVMLEITRMISANLFRTLISPPREKKVLQAFDLEED
EAVMDPAWSHLQIVYELLLKFIQSPETDAKLAKRYIDHSFILRLLDIFDSEDPREREYLK
MTLHRIYGKFMVYRPFIRKAINNIFYQFIYETEKHNGIAELLEILGSIINGFALPLKEEH
KLFLVRTLIPLHKPKCIALYHQQLSYSITQFVEKDCKLADTVIRGLIKYWPITNSTKEVM
FLGELEEILDATQPAEFQKCMVPLFRQIACCLNSSHFQVAERALFLWNNDHIENLIRQNS
KVILPIIFSALEKNVIEHWNQAVKSLSLNVQKLFSDRDPELYKECLRKYEENKAKEKDHK
LKQESVWKRLEEVASAKATSGEAVLISPSLARTSSLV

Transcript Sequence

Transcript ID

Os07t0274800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:10247753:10252401:1 gene:Os07g0274800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein phosphatase 2A B' regulatory subunit. (Os07t0274800-01);Similar to Protein phosphatase 2A B' regulatory subunit. (Os07t0274800-02)
Sequence

AGCGGCAGCAACCACCTTTGGTTCGTCCCCAACGCCACGCCGCCACCAACCGCGCCGCCC
ACCGCCCACGACCTCCACGCCGCCGCCGCCGCCTCCGCCTCCGCCTCCCCCTGCCGCTGC
GCGCCGCGGGTCACCCGCTGCCGCCCCCTGACACCGGTGCGTGCCCCGTGCCCCGTCGCC
CGGTCCACCCTCTCCCCGCCGCCTCTCTCGCCATCTTCCGGTGGCTCGCCGCGACCAGCC
CCTGCCTTTGGCCTCGGTTGGTTTGCCCCCCTCCCCCCTCTCCGGATTCGACGTTGGAGT
GGCTGATTTGGTGCGATAACATCCCCAATCTTCAGCTTTGCGGTGTGGAACGGGAGCAAG
CTGCAGCGTGGGAGTGGAATTAGGGTATGATATGTGGTAGTAGCTACTTTGTGAGGAGAA
AGCACAAAGGGTGGTCACTGATTCAGGGTAGGTTTTTGAGATTGTATCTGGTGGTCACTG
ATTCGGGTGGCGTCAGCTATATTGGGTGATATTATGATGAAGCAAATATTTGGGCGGCGG
AAGAATGCCAAGTCAGCTGATAAGGATTTCTTTTCTGGGACGAGCCCTTCCGTGTTGGAC
CAGGTTTCAGGTCTCGGAGTTGCTGATAGGGCCACGTCTAACTTGGGTAGCCAACCGCCA
ATTATCTCTAGTACTGGGCTCAGCTATGGGAGTGGAAACCGTGTAGAGAATCCAAACACA
AGGACAAATGGCAATTTGTATTCTTCTAGCTTTCAACCGTTGCCGAGCTTTAAAGATGTG
CCAAATTCGGAGAAACAGAATCTGCTGATCAGAAAGTTAAAATTGTGCTGCATTGTGTTT
GACTTTACTGATCCGACAAAGAACATACAGGAGAAGGAAATGAAAAGCCAAACTCTGTTG
GAAATTGTCGATTATGTTGTGTCTGCCACTGTTAAGTTTCCTGAAATAGTTATGCTGGAA
ATTACAAGAATGATTTCAGCAAACTTATTCAGGACACTAATTTCTCCACCCAGAGAGAAA
AAGGTGCTTCAAGCTTTTGATTTAGAAGAGGATGAAGCAGTGATGGATCCTGCATGGTCA
CACTTGCAGATTGTCTATGAGTTGCTATTGAAATTTATTCAATCTCCAGAAACAGATGCC
AAATTAGCTAAGAGATATATCGACCATTCCTTCATTTTAAGACTACTTGACATCTTTGAC
TCAGAAGACCCTAGGGAGAGGGAGTACTTAAAGATGACACTTCATCGTATCTATGGAAAG
TTCATGGTGTATCGGCCATTTATTAGAAAAGCTATCAATAATATATTCTACCAGTTCATC
TATGAAACTGAAAAACACAATGGCATAGCTGAGCTCTTGGAAATTTTAGGAAGTATCATC
AATGGATTTGCTTTACCACTCAAGGAAGAGCATAAGTTGTTCCTGGTACGGACCTTAATT
CCACTTCACAAGCCAAAGTGCATCGCACTGTACCATCAACAGTTGTCTTACAGCATCACA
CAGTTTGTTGAAAAAGATTGCAAGCTCGCAGATACTGTTATCAGAGGCCTCATAAAATAC
TGGCCTATCACAAACAGCACAAAGGAGGTGATGTTTTTGGGGGAATTGGAGGAGATACTC
GATGCAACCCAACCTGCAGAGTTCCAAAAATGTATGGTTCCCCTTTTCCGCCAGATTGCA
TGCTGCCTTAATAGTTCTCACTTTCAGGTTGCCGAGAGGGCATTGTTTTTGTGGAACAAC
GACCACATTGAGAATTTAATTAGACAAAACAGTAAGGTGATATTGCCTATCATCTTTTCT
GCACTGGAGAAAAATGTAATTGAGCACTGGAACCAGGCTGTCAAAAGTCTCTCTCTTAAC
GTACAAAAGTTATTCTCTGATCGTGACCCTGAACTTTACAAAGAATGTTTGAGGAAGTAT
GAGGAAAACAAAGCTAAAGAAAAGGATCATAAATTGAAGCAAGAATCTGTATGGAAACGC
CTAGAAGAGGTTGCATCAGCAAAAGCCACAAGTGGCGAGGCCGTCCTCATCTCTCCATCC
CTTGCTCGCACATCATCACTTGTGTAGGAACTTTGTTAAAGGTCTTGGAGAATCATGAGA
TACTGTACAGGATTGAATGTATATACAAGGTCTATGAAGGTGTGCAAATGAAGGGGGGAA
AAATTCTGAGAAGGCCAGTTGGGTCAGTTAGACTAGCTTTCATTTTTGTAAATCAGATGT
CTTGGGACTCCTGGCTTATTTTGTTACTTGTAGTTTGCTATGGCGAATGGTTAATCTGCC
AAAAAGGGATTCTGTGTCTTTCTTTGCTTGTTTAGTTAAATATATAGGCCCTCAGGATTG
TAAATGGAAGCAAATCTAGTACTCTCTGAGGGAGTGTTTGTC