Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0260400-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:9105495:9112919:-1 gene:Os07g0260400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D delta 3 description:Similar to Phospholipase D nu-2 (Fragment). (Os07t0260400-01)
Sequence	ATGGGGAAACACTCAGCTGAATCAGGTACTAGTATGCTCTTGCATGGAGATTTGGACATA CAGATAGTGGAAGCAAAATGTCTTCCCAATATGGATCTTATGACTGAAAGGATGCGAAAA TGCTTCACTGGCTACGGCGCTTGTAGTACTGAGTGTGGGAAGTCTGATCCACATACAGAC GTGAGGAAGATCATTACTAGTGATCCATATGTTTCGGTTTGCCTCTCAGGAGCAACAGTG GCACAAACTCGAGTCATTGCAAACTCAGAGAATCCTAAATGGGATGAACATTTTTATGTT CAGGTTGCCCATTCTGTTAGCAGAGTTGAGTTTCACGTAAAAGACAATGATGTTTTTGGA GCAGAACTTATAGGCGTGGCTTCAGTACCAGTTGAAAACATCACACCAGGTGATACCGTC AGTGGTTGGTTTCCAATATCTGGTCAGTATAGTAATCCTATGAAGGCATCTCCTGAACTT CATTTGTCTATCCAGTACAAGCCAATTGAGCAGAATCCATTGTACAAAGATGGAGTTGGT TCTGACGGTTGTCAGAGTATTGGTGTGCCAAATGCTTATTTTCCTCTTCGAAAGGGTGGT ATGGTCACTCTATATCAAGATGCCCATATTCCTGATGACTTTTGTCCTAAAATTGAAATT GATGGTGGAAGAGTATACGAACAAAATAAATGTTGGGAAGACATTTGCCATGCAATTGCT GAGGCTCATCACCTTATTTATATAATTGGTTGGTCGTTGTATCACCCTGTCAAGCTGGTA AGGGAATCAACAAAACCTGTGCCCAATGGAAGCCCACCAACCCTTGGGGGGCTTTTGAAA ACCAAGGTTCAGGAGGGGGTCCGTGTTATTGTGTTACTTTGGGATGACAAAACATCACAT GACAAATTTCTCTTGAAAACGGATGGACTCATGCATACACATGACGAGGAAGCTCGGAAG TTTTTCAGGCATTCTGGTGTCCATTGTGTGTTGGCTCCTCGCTACGCTAGCAACAAACTT AGCATTTTTAAGCAACAGGTTGTAGGAACTTTGTTTACGCACCATCAGAAATGTGTCATT GTTGACACCCAAGTCATAGGGAACAATAGAAAAATAACTGCTTTTATTGGTGGCCTAGAC TTATGTGATGGCAGATATGATACACCTGAACACAGGCTCTTCAAGGATCTTGACACCGTC TTCAAGGATGATTTCCATAATCCCACATTCCAAGTTAATAAGTCTGGGCCTAGACAACCA TGGCATGATTTACATTGCAAGATTGAGGGTCCAGCTGCCTATGATATACTTACAAACTTT GAACAGAGATGGAGAAAATCTGCAAAATGGAAAGTCAGCGTTAGAAGAGCTGTAAGTTGG CACCATGATACCTTGGTAAAAATAAACCGGATGTCGTGGATTGTCTCCCCCTCTGCAGAT GAGTTAAATGCACGTGTTTGTGAACAAGATGATCCAGAAAACTGGCATGTACAGATATTC CGGTCCATTGATTCAGGATCAGTAAAAGGGTTCCCTAAACTTGTTCAGGAGGCTGAGTCA CAGAATCTTGTCTGCGCGAAAAATCTGCAGATAGACAAGAGCATACATAATGCATATGTG AAAGCTATCAGATCTGCACAACACTATATCTACATTGAAAATCAATATTTTATTGGATCT TCATACTACTGGTCTTCAAATAGAAGTGCAGGTGCAGAGAATTTGATACCGATCGAATTG GCCATAAAGATTGCAAGAAAGATTAAAGCTAGGGAAAGATTTGCAGCTTACATTGTTATA CCAATGTGGCCCGAGGGTAATCCAACAACTGCTGCTATGCAGGAGATCCTCTTTTGGCAG GGACAAACAATGTCCATGATGTACAAGATTGTCGCAGAAGCACTACAGAAGGAGGGGTTA GATGATACGCATCCACAGGATTACCTTAACTTCTACTGTCTTGGTAAGCGTGAAGTCTCA AATGACGTATCTACAACAAGCCAATCCAATGAGAATTCCCCACAGCGCCTGGTCCAAAAG TTCAAGCGATTCATGATCTACGTGCACTCCAAGGGGATGATTGTCGATGATGAGTATGTG CTCATAGGATCAGCCAACATAAATCAGAGGTCCATGGATGGCTCAAGGGACACCGAGATC GCTATGGGCGCCTACCAGCCTCACTACAGCTGGGCAGGACGCAAGAAAGCTCCACGAGGA CAGGTGTACGGGTACAGGATGTCGCTGTGGGCGGAGCACCTGGGTACAGTGGAGGAGTGC TTCCGTTGGCCTCATTCCGTGGAGTGCGTCCGGCAGGTGAATGAAATGGCAGAAGAGAAC TGGGCGCGCTACGTATCACCGGAGATGGTGAACATGCGGGGGCACCTCATGAGGTACCCC ATCAATGTTGAACGGGATGGTAGGGTTGGTCCGGTGCATGGGTACGAGTGCTTCCCGGAT GTCGGTGGCAAGGTGCTCGGCACACACTCTTCTCTTCCAAATGCATTGACAACTTGA

Peptide Sequence

PEP ID	Os07t0260400-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:9105495:9112919:-1 gene:Os07g0260400 transcript:Os07t0260400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D delta 3 description:Similar to Phospholipase D nu-2 (Fragment). (Os07t0260400-01)
Sequence	MGKHSAESGTSMLLHGDLDIQIVEAKCLPNMDLMTERMRKCFTGYGACSTECGKSDPHTD VRKIITSDPYVSVCLSGATVAQTRVIANSENPKWDEHFYVQVAHSVSRVEFHVKDNDVFG AELIGVASVPVENITPGDTVSGWFPISGQYSNPMKASPELHLSIQYKPIEQNPLYKDGVG SDGCQSIGVPNAYFPLRKGGMVTLYQDAHIPDDFCPKIEIDGGRVYEQNKCWEDICHAIA EAHHLIYIIGWSLYHPVKLVRESTKPVPNGSPPTLGGLLKTKVQEGVRVIVLLWDDKTSH DKFLLKTDGLMHTHDEEARKFFRHSGVHCVLAPRYASNKLSIFKQQVVGTLFTHHQKCVI VDTQVIGNNRKITAFIGGLDLCDGRYDTPEHRLFKDLDTVFKDDFHNPTFQVNKSGPRQP WHDLHCKIEGPAAYDILTNFEQRWRKSAKWKVSVRRAVSWHHDTLVKINRMSWIVSPSAD ELNARVCEQDDPENWHVQIFRSIDSGSVKGFPKLVQEAESQNLVCAKNLQIDKSIHNAYV KAIRSAQHYIYIENQYFIGSSYYWSSNRSAGAENLIPIELAIKIARKIKARERFAAYIVI PMWPEGNPTTAAMQEILFWQGQTMSMMYKIVAEALQKEGLDDTHPQDYLNFYCLGKREVS NDVSTTSQSNENSPQRLVQKFKRFMIYVHSKGMIVDDEYVLIGSANINQRSMDGSRDTEI AMGAYQPHYSWAGRKKAPRGQVYGYRMSLWAEHLGTVEECFRWPHSVECVRQVNEMAEEN WARYVSPEMVNMRGHLMRYPINVERDGRVGPVHGYECFPDVGGKVLGTHSSLPNALTT

Transcript Sequence

Transcript ID	Os07t0260400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:9105495:9112919:-1 gene:Os07g0260400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D delta 3 description:Similar to Phospholipase D nu-2 (Fragment). (Os07t0260400-01)
Sequence	AACAGCCTTCTCCCCAGCCTATGCTCCTCACCGGAGGAGGCTAAATATATTAACAGGACT TGTATAAGGTTTTCATCTGCAAGTTGGAGTTGGAAGCCAATGTGAAGTTGAGAGGCTTAG ACATACAGAATAAAGTGGATGGGGAAGAGAGCTCTGCTGTCAGGTGAAGCCTGGGGAATC GTCTTCACTTTTTGATCCAGCAGCAAATGCATATGTTCCCGACTCAGCGAGGAGGTCTGC TTTGATCTCCAGTCAAGAATTTGATTAAAAAACATACAACTAGAATCAGGTATCATTCTG CAGCACCCTACATTGTGATTTGCCTGGCAAAGGATGTGTTCTCCAGGATAATGGTGGTTT AGCTTCTGGTTTACTTTATTATTTGGTGGATTTTATCATCATAAATCAGTACAATGGGGA AACACTCAGCTGAATCAGGTACTAGTATGCTCTTGCATGGAGATTTGGACATACAGATAG TGGAAGCAAAATGTCTTCCCAATATGGATCTTATGACTGAAAGGATGCGAAAATGCTTCA CTGGCTACGGCGCTTGTAGTACTGAGTGTGGGAAGTCTGATCCACATACAGACGTGAGGA AGATCATTACTAGTGATCCATATGTTTCGGTTTGCCTCTCAGGAGCAACAGTGGCACAAA CTCGAGTCATTGCAAACTCAGAGAATCCTAAATGGGATGAACATTTTTATGTTCAGGTTG CCCATTCTGTTAGCAGAGTTGAGTTTCACGTAAAAGACAATGATGTTTTTGGAGCAGAAC TTATAGGCGTGGCTTCAGTACCAGTTGAAAACATCACACCAGGTGATACCGTCAGTGGTT GGTTTCCAATATCTGGTCAGTATAGTAATCCTATGAAGGCATCTCCTGAACTTCATTTGT CTATCCAGTACAAGCCAATTGAGCAGAATCCATTGTACAAAGATGGAGTTGGTTCTGACG GTTGTCAGAGTATTGGTGTGCCAAATGCTTATTTTCCTCTTCGAAAGGGTGGTATGGTCA CTCTATATCAAGATGCCCATATTCCTGATGACTTTTGTCCTAAAATTGAAATTGATGGTG GAAGAGTATACGAACAAAATAAATGTTGGGAAGACATTTGCCATGCAATTGCTGAGGCTC ATCACCTTATTTATATAATTGGTTGGTCGTTGTATCACCCTGTCAAGCTGGTAAGGGAAT CAACAAAACCTGTGCCCAATGGAAGCCCACCAACCCTTGGGGGGCTTTTGAAAACCAAGG TTCAGGAGGGGGTCCGTGTTATTGTGTTACTTTGGGATGACAAAACATCACATGACAAAT TTCTCTTGAAAACGGATGGACTCATGCATACACATGACGAGGAAGCTCGGAAGTTTTTCA GGCATTCTGGTGTCCATTGTGTGTTGGCTCCTCGCTACGCTAGCAACAAACTTAGCATTT TTAAGCAACAGGTTGTAGGAACTTTGTTTACGCACCATCAGAAATGTGTCATTGTTGACA CCCAAGTCATAGGGAACAATAGAAAAATAACTGCTTTTATTGGTGGCCTAGACTTATGTG ATGGCAGATATGATACACCTGAACACAGGCTCTTCAAGGATCTTGACACCGTCTTCAAGG ATGATTTCCATAATCCCACATTCCAAGTTAATAAGTCTGGGCCTAGACAACCATGGCATG ATTTACATTGCAAGATTGAGGGTCCAGCTGCCTATGATATACTTACAAACTTTGAACAGA GATGGAGAAAATCTGCAAAATGGAAAGTCAGCGTTAGAAGAGCTGTAAGTTGGCACCATG ATACCTTGGTAAAAATAAACCGGATGTCGTGGATTGTCTCCCCCTCTGCAGATGAGTTAA ATGCACGTGTTTGTGAACAAGATGATCCAGAAAACTGGCATGTACAGATATTCCGGTCCA TTGATTCAGGATCAGTAAAAGGGTTCCCTAAACTTGTTCAGGAGGCTGAGTCACAGAATC TTGTCTGCGCGAAAAATCTGCAGATAGACAAGAGCATACATAATGCATATGTGAAAGCTA TCAGATCTGCACAACACTATATCTACATTGAAAATCAATATTTTATTGGATCTTCATACT ACTGGTCTTCAAATAGAAGTGCAGGTGCAGAGAATTTGATACCGATCGAATTGGCCATAA AGATTGCAAGAAAGATTAAAGCTAGGGAAAGATTTGCAGCTTACATTGTTATACCAATGT GGCCCGAGGGTAATCCAACAACTGCTGCTATGCAGGAGATCCTCTTTTGGCAGGGACAAA CAATGTCCATGATGTACAAGATTGTCGCAGAAGCACTACAGAAGGAGGGGTTAGATGATA CGCATCCACAGGATTACCTTAACTTCTACTGTCTTGGTAAGCGTGAAGTCTCAAATGACG TATCTACAACAAGCCAATCCAATGAGAATTCCCCACAGCGCCTGGTCCAAAAGTTCAAGC GATTCATGATCTACGTGCACTCCAAGGGGATGATTGTCGATGATGAGTATGTGCTCATAG GATCAGCCAACATAAATCAGAGGTCCATGGATGGCTCAAGGGACACCGAGATCGCTATGG GCGCCTACCAGCCTCACTACAGCTGGGCAGGACGCAAGAAAGCTCCACGAGGACAGGTGT ACGGGTACAGGATGTCGCTGTGGGCGGAGCACCTGGGTACAGTGGAGGAGTGCTTCCGTT GGCCTCATTCCGTGGAGTGCGTCCGGCAGGTGAATGAAATGGCAGAAGAGAACTGGGCGC GCTACGTATCACCGGAGATGGTGAACATGCGGGGGCACCTCATGAGGTACCCCATCAATG TTGAACGGGATGGTAGGGTTGGTCCGGTGCATGGGTACGAGTGCTTCCCGGATGTCGGTG GCAAGGTGCTCGGCACACACTCTTCTCTTCCAAATGCATTGACAACTTGAATTGGCTGGA GCATGAACGAGCTAGATGTGGCAACTACCACTAATACTTTGAAAAGAATCATTTTGGGGC GTGAAGCTTTTTGTTTGTACATGAAAGAGAGACTGCTTGATACCAGTTCCACACATTGCT GTTATAGAGTACTGCAGTTCGACTGCTGCATATGCAGTATGTATAATAGGATTTCAATTA TAATCATCTCTGGCTGGATGCAAATACATCTGTTCTTGCATTTAGTTTGTTGTAAAAGGC ACCTTCCCTTTATTCAGACAGTCGGTTAGCCTTAAAAACAAAATTCTTGGTGGCACATGA TTCAAGAATTTATTGGAATGCCTCAGAAGCATTACATT