Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0259700-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:9036095:9039223:-1 gene:Os07g0259700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PRLI-interacting factor G (Fragment). (Os07t0259700-01)
Sequence	ATGGAAGGCGGCGGGGCTCAGCGCCACCACCGCGGGCGGCGCCGAGGTGCGGCGGGGTCC GCCGCGCGAACGCCCCGGGGCTGGTGCTGCTCCTTCGCTGGCGTCCCGCAGAGCCCCGAC CTCCGCCCCTTCCCTCCCTCCCTCGCGCCGCCGGCCACGGCGGCGTCTTCCTCCCCGGCG CCGGGTGGTGGTGCCGGGAGGAATAAGCTGCCGCCCAAGTCCCCCTCGATCTCGTCGTTC CACAGCTCGCCGACGTCGTCGAGGCTCGCCGGCCTCGGCGGCCTCATCGACCCGCGCCGC ATCCTCTCCCCCGGCCGCGTCTCGCCCATCGACCTCGATGACTCCGCGCCCCCGCTCCCG CTCCCGCTCCCGCTCCCGCCGCCGCCGGTGACGCCCGCGGCGGAGACGGTGGTGGTCCCG GCGGAGACGTCGGCGGCGGTGGCGCCGTTGGTGGTGGCGTCGGCGGAGGCGGATGCGGCG GGCGACGAGGCGCTGGATCTGAGGCTTTTCCTTCGCGGGAGGGACGGGAGTACGTGCGTG GTGATGGAGCTCGACTCCGGGGTGCTCTGCGACAGCAGCGCCTTCTTCGCCGCCATGGCG CCGCCGCGCGGGCCCGCCGGTGACGGAGGAGGGAGCGGCAGGAGGATCGAGGTGGACGGG GTGGACAATGTGGAGGCGTTCCGCGCCGCCGTCGAGCTCATGTACCAGCCTGATCCGCTG CGGTGGCTCGCCGCCGCTGGCGTGTCGCGCTCCATTGATGTGCTCGAGGTGTCTTCATCA ATCATGTTTGAAAGAGGAGTTAAATTGTGTTTGTCATACATAGAAGCAGTTCCATGGAAT GAGAACGAGGAGGAGAAGCTCAAGAATCTCTTTGCAAGATGTACTTTTGATGAAGCAATA TCCCAAGATGTTCTGGCTAGATTGCGGCCTCACAGCTGGAGCAGCTCAGAAGACCTCACA GTGCATCTTATCCAATCAGTCACGAGCAGCACCAACAGTGGTGCAAGAAAAGATATGCAA TCTTTGGTAAATGGCCTTCTAAGCAAAAGTTCTGTCTACCAAAAAGACATGGCAGGGCTA AACAGAGAGAGCCTGTATAATATCTGTTATGCCTGTTTAAATTCACTAGTGGATCTTTAT GACGAAGCAACAGAGGCTACAAACCACACTGCTCAAGCATTAGTTATCAAGGGCAGTAAA CCATTTATTGAGAGAATCTCTCAGCAGACAGAGAACCTCAACTGGCTCTTGGACATTCTT GTGAATATTGACATGGCTGAAGAGTTTGTGGAGCTGTGGGCAAAGCAAGACAGGCTCATC AGGATACATGAGCAGGCATCACCCATGATGAGGTATGAACTAAGCCGAATATCTGCTAGT GTTTTCATCGCACTCGGCAAAGGAAAAGTTCAGTGCCGTGGAGAGCTGAGGAGCCTCCTC TTCTACGGATGGTTCAGCCCGATGTTGCTTGATTTCGGCTGGCTTCAGCGATGCTCCAAA GGTCTGGATGTAAGATCTTTGGAGGAAAATCTAGGACAGGCCCTACTAACCCTCCCACTC AAGCAGCAGCAGTGTCTATTTGAGGAGTGGTTTCAGTGTTTTGCATCCAAAGGATCAGAG TGCCCGAACCTTACTAGAGCTTTCCAGGTATGGTGGAGAAGGTCCTTCGTTAGATCATCG GTAGAAGGTCAGTGA

Peptide Sequence

PEP ID	Os07t0259700-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:9036095:9039223:-1 gene:Os07g0259700 transcript:Os07t0259700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PRLI-interacting factor G (Fragment). (Os07t0259700-01)
Sequence	MEGGGAQRHHRGRRRGAAGSAARTPRGWCCSFAGVPQSPDLRPFPPSLAPPATAASSSPA PGGGAGRNKLPPKSPSISSFHSSPTSSRLAGLGGLIDPRRILSPGRVSPIDLDDSAPPLP LPLPLPPPPVTPAAETVVVPAETSAAVAPLVVASAEADAAGDEALDLRLFLRGRDGSTCV VMELDSGVLCDSSAFFAAMAPPRGPAGDGGGSGRRIEVDGVDNVEAFRAAVELMYQPDPL RWLAAAGVSRSIDVLEVSSSIMFERGVKLCLSYIEAVPWNENEEEKLKNLFARCTFDEAI SQDVLARLRPHSWSSSEDLTVHLIQSVTSSTNSGARKDMQSLVNGLLSKSSVYQKDMAGL NRESLYNICYACLNSLVDLYDEATEATNHTAQALVIKGSKPFIERISQQTENLNWLLDIL VNIDMAEEFVELWAKQDRLIRIHEQASPMMRYELSRISASVFIALGKGKVQCRGELRSLL FYGWFSPMLLDFGWLQRCSKGLDVRSLEENLGQALLTLPLKQQQCLFEEWFQCFASKGSE CPNLTRAFQVWWRRSFVRSSVEGQ

Transcript Sequence

Transcript ID	Os07t0259700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:9036095:9039223:-1 gene:Os07g0259700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PRLI-interacting factor G (Fragment). (Os07t0259700-01)
Sequence	GTCCCGTGTTGTTCCACTCATCACACCTCTCCCTCCTCCCCTCTCATGGCCGCCGCCTCC GAACCCTAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCGCCCCACCCAGA TCTGCGCCGGCGACGGCAAGGATGGAAGGCGGCGGGGCTCAGCGCCACCACCGCGGGCGG CGCCGAGGTGCGGCGGGGTCCGCCGCGCGAACGCCCCGGGGCTGGTGCTGCTCCTTCGCT GGCGTCCCGCAGAGCCCCGACCTCCGCCCCTTCCCTCCCTCCCTCGCGCCGCCGGCCACG GCGGCGTCTTCCTCCCCGGCGCCGGGTGGTGGTGCCGGGAGGAATAAGCTGCCGCCCAAG TCCCCCTCGATCTCGTCGTTCCACAGCTCGCCGACGTCGTCGAGGCTCGCCGGCCTCGGC GGCCTCATCGACCCGCGCCGCATCCTCTCCCCCGGCCGCGTCTCGCCCATCGACCTCGAT GACTCCGCGCCCCCGCTCCCGCTCCCGCTCCCGCTCCCGCCGCCGCCGGTGACGCCCGCG GCGGAGACGGTGGTGGTCCCGGCGGAGACGTCGGCGGCGGTGGCGCCGTTGGTGGTGGCG TCGGCGGAGGCGGATGCGGCGGGCGACGAGGCGCTGGATCTGAGGCTTTTCCTTCGCGGG AGGGACGGGAGTACGTGCGTGGTGATGGAGCTCGACTCCGGGGTGCTCTGCGACAGCAGC GCCTTCTTCGCCGCCATGGCGCCGCCGCGCGGGCCCGCCGGTGACGGAGGAGGGAGCGGC AGGAGGATCGAGGTGGACGGGGTGGACAATGTGGAGGCGTTCCGCGCCGCCGTCGAGCTC ATGTACCAGCCTGATCCGCTGCGGTGGCTCGCCGCCGCTGGCGTGTCGCGCTCCATTGAT GTGCTCGAGGTGTCTTCATCAATCATGTTTGAAAGAGGAGTTAAATTGTGTTTGTCATAC ATAGAAGCAGTTCCATGGAATGAGAACGAGGAGGAGAAGCTCAAGAATCTCTTTGCAAGA TGTACTTTTGATGAAGCAATATCCCAAGATGTTCTGGCTAGATTGCGGCCTCACAGCTGG AGCAGCTCAGAAGACCTCACAGTGCATCTTATCCAATCAGTCACGAGCAGCACCAACAGT GGTGCAAGAAAAGATATGCAATCTTTGGTAAATGGCCTTCTAAGCAAAAGTTCTGTCTAC CAAAAAGACATGGCAGGGCTAAACAGAGAGAGCCTGTATAATATCTGTTATGCCTGTTTA AATTCACTAGTGGATCTTTATGACGAAGCAACAGAGGCTACAAACCACACTGCTCAAGCA TTAGTTATCAAGGGCAGTAAACCATTTATTGAGAGAATCTCTCAGCAGACAGAGAACCTC AACTGGCTCTTGGACATTCTTGTGAATATTGACATGGCTGAAGAGTTTGTGGAGCTGTGG GCAAAGCAAGACAGGCTCATCAGGATACATGAGCAGGCATCACCCATGATGAGGTATGAA CTAAGCCGAATATCTGCTAGTGTTTTCATCGCACTCGGCAAAGGAAAAGTTCAGTGCCGT GGAGAGCTGAGGAGCCTCCTCTTCTACGGATGGTTCAGCCCGATGTTGCTTGATTTCGGC TGGCTTCAGCGATGCTCCAAAGGTCTGGATGTAAGATCTTTGGAGGAAAATCTAGGACAG GCCCTACTAACCCTCCCACTCAAGCAGCAGCAGTGTCTATTTGAGGAGTGGTTTCAGTGT TTTGCATCCAAAGGATCAGAGTGCCCGAACCTTACTAGAGCTTTCCAGGTATGGTGGAGA AGGTCCTTCGTTAGATCATCGGTAGAAGGTCAGTGATAATGTTTTTACTACTAGTATATG CTGTCTGTACCACTTGTAAAATTGCAATTGTTGGAATAACTAGTAGGGGTGATCAGGTGA ATGATGTCTACCGTAGTTTAGCCCTTTCGATTGTATGTGCATAAGCTTGTTAAATTTATT TTGAGGAATGGATGGCTTTGGTGTGTGTATGTT