Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0258700-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:8989136:8992724:1 gene:Os07g0258700 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB domain containing protein. (Os07t0258700-01)
Sequence

ATGTGGTGCCAGTCGTGCAAGGAGGAGTACGAGGAGGAGGACGCCGGGACGTGCAAGGAG
TGCTACGAGGAGGCGAGCGAGACGGAGGAGGAGCTCAAGCGCGAGATCGACGACCTCCGC
TCCCGCCTCCACTTCCTCCGCCTCCCTTCCCCTTCCCTCGACGCCTCCTCCCTCTCCCAC
TCCGACCTCCTCCTCCACGCCATCCCCGCCGATGCGCCCGCCCGCCCCGACACCCCCGCC
GTCCCCGCCCACCGCGTCATCCTCGCCAGCAGATCTCCTGTTTTCAGAGCTATGCTTGAG
AACGAGATGGAAGAGAGCCGGAGTGGCATCATCAAAATATACGATGTGTCCTACGACGTC
CTTCGTGCTTTCGTCCATTACATGTACACAGCAGAAGCTCTCCTTGACGAGCAGATGGCA
TCTGATCTCCTGGTGTTGGCTGAGAAGTACGAAGTGAAGAACCTGAAGGCCTACTGTGAG
AAATTCTTAACATCCAAAGTGAGCAACGACAATGCCATCACGCATTATGCGTTTGCGCAT
CGCCACAGCGCGAAGCAGCTGCTCGAGACATCCCTGGCAGCGATCATGGACAACATGTCA
ACGCTGGCAGATCGGGAGGAATACAAGGAGCTTGTTGAGAAGGACCCAAGGCTTGTTGTG
GAGATATATGAAGCCTATCTGAACAGACAAGTGAACACTGCTGCTGGGAAGGAGACAGAT
TCCAGTAGTAGGAAGGGGTAA

Peptide Sequence

PEP ID

Os07t0258700-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:8989136:8992724:1 gene:Os07g0258700 transcript:Os07t0258700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB domain containing protein. (Os07t0258700-01)
Sequence

MWCQSCKEEYEEEDAGTCKECYEEASETEEELKREIDDLRSRLHFLRLPSPSLDASSLSH
SDLLLHAIPADAPARPDTPAVPAHRVILASRSPVFRAMLENEMEESRSGIIKIYDVSYDV
LRAFVHYMYTAEALLDEQMASDLLVLAEKYEVKNLKAYCEKFLTSKVSNDNAITHYAFAH
RHSAKQLLETSLAAIMDNMSTLADREEYKELVEKDPRLVVEIYEAYLNRQVNTAAGKETD
SSSRKG

Transcript Sequence

Transcript ID

Os07t0258700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:8989136:8992724:1 gene:Os07g0258700 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB domain containing protein. (Os07t0258700-01)
Sequence

ATCCATCCATCCTCGACACCACCGTCTCCGCTTCCCTTTCCATTCGCGCCGCCACCTCGC
CGTCGCACCCAGCGGCGGCGCCGCCGTGCCGGAGGAGCGGCGATGTGGTGCCAGTCGTGC
AAGGAGGAGTACGAGGAGGAGGACGCCGGGACGTGCAAGGAGTGCTACGAGGAGGCGAGC
GAGACGGAGGAGGAGCTCAAGCGCGAGATCGACGACCTCCGCTCCCGCCTCCACTTCCTC
CGCCTCCCTTCCCCTTCCCTCGACGCCTCCTCCCTCTCCCACTCCGACCTCCTCCTCCAC
GCCATCCCCGCCGATGCGCCCGCCCGCCCCGACACCCCCGCCGTCCCCGCCCACCGCGTC
ATCCTCGCCAGCAGATCTCCTGTTTTCAGAGCTATGCTTGAGAACGAGATGGAAGAGAGC
CGGAGTGGCATCATCAAAATATACGATGTGTCCTACGACGTCCTTCGTGCTTTCGTCCAT
TACATGTACACAGCAGAAGCTCTCCTTGACGAGCAGATGGCATCTGATCTCCTGGTGTTG
GCTGAGAAGTACGAAGTGAAGAACCTGAAGGCCTACTGTGAGAAATTCTTAACATCCAAA
GTGAGCAACGACAATGCCATCACGCATTATGCGTTTGCGCATCGCCACAGCGCGAAGCAG
CTGCTCGAGACATCCCTGGCAGCGATCATGGACAACATGTCAACGCTGGCAGATCGGGAG
GAATACAAGGAGCTTGTTGAGAAGGACCCAAGGCTTGTTGTGGAGATATATGAAGCCTAT
CTGAACAGACAAGTGAACACTGCTGCTGGGAAGGAGACAGATTCCAGTAGTAGGAAGGGG
TAATTCAAAAGAAAACTGCTATCAGAGATGTAATTAATGTTCTAACCAAGCTTTTGCATG
TTCATGCTAGGCAAAGACTGGCACATCAAATTGTCATCCTGCGGTGTAGGCGCAGAACAG
CTATTTCTGTATATGCTTGAATTGATACTGTGTGCTCGCTACTGATAGAATGAGATCTAT
TGCCATCTTTATGT