Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0249200-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:8287971:8291152:1 gene:Os07g0249200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vesicle-associated membrane protein 724 (AtVAMP724) (SYBL1-like protein). (Os07t0249200-01);Similar to Vesicle-associated membrane protein 724 (AtVAMP724) (SYBL1-like protein). (Os07t0249200-02)
Sequence	ATGGCGTCGCCGCCGGGGAAGAAGGGGGAAGGCGGCGGCGATGGCGGCGGCGGGAAGGCG GAGTGGCTGATCTACGCGTTCGTGGCGCGCGGCACGGCGGTGCTGGCGGAGTACACCGAG TTCACCGGCAACTTCCCGGCGCTCGCGGCGCAGTGCCTGCAGCGGCTCCCCGCCTCGGGC GGCGGCGGCTCCGGCGGTGGCGCGCCGGCGCGGTTCAGCTACGCGTGCGACGGGCACACC TTCAACTTCCTCCTCCACCGCGGCTACGCCTATTGTGTAGTTGCAAAGGAATCTGTCCCA AAGAATGTCTCGGTGGCTTTTCTAGAAAGGTTGAAAGATGACTTCATGAAGAGATATGGA GGTGGTAAAGCTGATACAGCTCTTGCAAAAAGTCTGAATAAAGAATACGGACCAGTTATA AAGCAGCACATGCAGTATGTTCTTGATCATTCAGAAGAAATAGAGAAGACATTGAAAGTG CAAGCCCAAGTTTCTGAAGTTAAAAATATCATGTTAGAAAACATAGAGAAGACTTTGGGT CGTGGAGAAAAACTGAGTGAACTTCAAGATAAGACTTCCGATCTACAAAGTCAGGCCCAG GAATTCAAAAAGAAGGGAGTGAAAATTCGTAGGAAGACATGGTTGCAGAACATGAAAATC AAATTGGTGGTTCTTGGAATTCTTTTGCTTCTTGTAATAATCGTATGGGTGTCTGTTTGT CAAGGGTTTGACTGCACCAAGCACTGA

Peptide Sequence

PEP ID	Os07t0249200-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:8287971:8291152:1 gene:Os07g0249200 transcript:Os07t0249200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vesicle-associated membrane protein 724 (AtVAMP724) (SYBL1-like protein). (Os07t0249200-01);Similar to Vesicle-associated membrane protein 724 (AtVAMP724) (SYBL1-like protein). (Os07t0249200-02)
Sequence	MASPPGKKGEGGGDGGGGKAEWLIYAFVARGTAVLAEYTEFTGNFPALAAQCLQRLPASG GGGSGGGAPARFSYACDGHTFNFLLHRGYAYCVVAKESVPKNVSVAFLERLKDDFMKRYG GGKADTALAKSLNKEYGPVIKQHMQYVLDHSEEIEKTLKVQAQVSEVKNIMLENIEKTLG RGEKLSELQDKTSDLQSQAQEFKKKGVKIRRKTWLQNMKIKLVVLGILLLLVIIVWVSVC QGFDCTKH

Transcript Sequence

Transcript ID	Os07t0249200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:8287971:8291152:1 gene:Os07g0249200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vesicle-associated membrane protein 724 (AtVAMP724) (SYBL1-like protein). (Os07t0249200-01);Similar to Vesicle-associated membrane protein 724 (AtVAMP724) (SYBL1-like protein). (Os07t0249200-02)
Sequence	GGAATCCTCCTCCTCGATCCCTCCCAATCCCCAATCCCAGCATCCCCGAGATCCGCCTCC CAGCGCGATCCCAACCTCATGGCGTCGCCGCCGGGGAAGAAGGGGGAAGGCGGCGGCGAT GGCGGCGGCGGGAAGGCGGAGTGGCTGATCTACGCGTTCGTGGCGCGCGGCACGGCGGTG CTGGCGGAGTACACCGAGTTCACCGGCAACTTCCCGGCGCTCGCGGCGCAGTGCCTGCAG CGGCTCCCCGCCTCGGGCGGCGGCGGCTCCGGCGGTGGCGCGCCGGCGCGGTTCAGCTAC GCGTGCGACGGGCACACCTTCAACTTCCTCCTCCACCGCGGCTACGCCTATTGTGTAGTT GCAAAGGAATCTGTCCCAAAGAATGTCTCGGTGGCTTTTCTAGAAAGGTTGAAAGATGAC TTCATGAAGAGATATGGAGGTGGTAAAGCTGATACAGCTCTTGCAAAAAGTCTGAATAAA GAATACGGACCAGTTATAAAGCAGCACATGCAGTATGTTCTTGATCATTCAGAAGAAATA GAGAAGACATTGAAAGTGCAAGCCCAAGTTTCTGAAGTTAAAAATATCATGTTAGAAAAC ATAGAGAAGACTTTGGGTCGTGGAGAAAAACTGAGTGAACTTCAAGATAAGACTTCCGAT CTACAAAGTCAGGCCCAGGAATTCAAAAAGAAGGGAGTGAAAATTCGTAGGAAGACATGG TTGCAGAACATGAAAATCAAATTGGTGGTTCTTGGAATTCTTTTGCTTCTTGTAATAATC GTATGGGTGTCTGTTTGTCAAGGGTTTGACTGCACCAAGCACTGAAAGTAACTACTATCC TACTGTCGGTATAGCTCTGCTATATAATAGTTTGGAGACGTGAGATTGTGTCGGTGAAAT CAAGTGCATTATTGACTCTTTGGCTTGATTTCTGCTGCACATTTATCGCGATACAAATGT AAAGTTGAGTTGGTGTCAAGTGTTATTCAAACCGTGTGACCAACATTACATAAAGTAGTA ATAGTACGGTTGCTTGTCGATTGATCC