Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0246200-03
CDS Infomation	cds chromosome:IRGSP-1.0:7:8136999:8141053:1 gene:Os07g0246200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calreticulin 1, calreticulin description:Similar to Calreticulin (Fragment). (Os07t0246200-01);Similar to Calreticulin (Fragment). (Os07t0246200-02);Similar to calreticulin2. (Os07t0246200-03)
Sequence	ATGGCGATCCGCGCGAGGTCCTCCTCCTACGCCGCCGCGGCGGTCGCGCTGGCGCTCGCG CTGGCGTCCGTCGCCGCTGTCGCCGGCGAGGTCTTCTTCCAGGAGAAGTTCGAAGATGGA TGGGAAAGTCGGTGGGTCAAGTCAGAATGGAAGAAGGATGAGAACATGGCTGGTGAATGG AACCACACATCTGGGAAGTGGAATGGAGATCCTGAGGACAAAGGTATCCAAACCTCTGAG GACTACAGGTTCTACGCTATTTCAGCGGAGTACCCAGAATTCAGCAACAAGGATAAAACC CTGGTGCTGCAGTTCTCTGTAAAGCATGAGCAAAAGCTTGACTGTGGTGGTGGATATGTC AAGTTGCTTGGTGGTGATGTTGACCAGAAGAAATTTGGTGGGGACACACCGTACAGCATT ATGTTTGGACCAGACATCTGTGGGTACAGCACCAAGAAGGTCCATACTATCTTTACTAAG AATGACAAGAACCATTTGATCAAGAAGGATGTCCCCTGCGAGACTGATCAGCTGTCCCAT GTGTACACTTTGATCATCCATCCTGATGCTACATACACCATACTTATTGACAATGTTGAG AAGCAATCTGGCAGCATCTACGAGCACTGGGATATTCTGCCTCCGAAGCAAATCAAGGAC CCAGAAGCTAAGAAGCCAGAGGACTGGGATGACAAGGAGTACATTCCTGACCCTGAGGAC AAGAAGCCTGAGGGATACGATGATATTCCCAAGGAAATCCCTGACCCTGATGCTAAGAAG CCTGAGGACTGGGATGATGAGGAAGATGGTGAGTGGACTGCACCAACCATTCCTAACCCT GAGTACAAGGGACCATGGAAGCAAAAGAAAATCAAGAACCCTAACTACCAAGGCAAATGG AAGGCACCGATGATCGACAACCCAGACTTCAAGGATGATCCATACATCTATGCTTTTGAC AGCCTGAAGTACATTGGCATTGAGTTGTGGCAGGTCAAATCAGGTACTCTGTTTGACAAC TTCCTTATTACTGACGACCCTGAGTTGGCCAAGACATTCGCAGAGGAGACATGGGGCAAG CACAAGGATGCTGAGAAGGCTGCTTTTGACGAGGCAGAGAAAAAGAAGGAAGAGGAGGAA GCTGCCAAGGCCGGTGAGGACGATGATGATTTGGATGACGAGGATGCTGAGGATGAGGAC AAGGCCGATGAGAAGGCTGACTCTGATGCAGAGGATGGCAAGGATTCTGATGATGAGAAG CATGTATGTAACACTCCTGCGTTTTCTTGA

Peptide Sequence

PEP ID	Os07t0246200-03
PEP Infomation	pep chromosome:IRGSP-1.0:7:8136999:8141053:1 gene:Os07g0246200 transcript:Os07t0246200-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calreticulin 1, calreticulin description:Similar to Calreticulin (Fragment). (Os07t0246200-01);Similar to Calreticulin (Fragment). (Os07t0246200-02);Similar to calreticulin2. (Os07t0246200-03)
Sequence	MAIRARSSSYAAAAVALALALASVAAVAGEVFFQEKFEDGWESRWVKSEWKKDENMAGEW NHTSGKWNGDPEDKGIQTSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYV KLLGGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSH VYTLIIHPDATYTILIDNVEKQSGSIYEHWDILPPKQIKDPEAKKPEDWDDKEYIPDPED KKPEGYDDIPKEIPDPDAKKPEDWDDEEDGEWTAPTIPNPEYKGPWKQKKIKNPNYQGKW KAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNFLITDDPELAKTFAEETWGK HKDAEKAAFDEAEKKKEEEEAAKAGEDDDDLDDEDAEDEDKADEKADSDAEDGKDSDDEK HVCNTPAFS

Transcript Sequence

Transcript ID	Os07t0246200-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:8136999:8141053:1 gene:Os07g0246200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calreticulin 1, calreticulin description:Similar to Calreticulin (Fragment). (Os07t0246200-01);Similar to Calreticulin (Fragment). (Os07t0246200-02);Similar to calreticulin2. (Os07t0246200-03)
Sequence	ACGGGAGATTGGATCGGAAGCTTCTAGAAGTTTCCGTGGGCGATGGCGATCCGCGCGAGG TCCTCCTCCTACGCCGCCGCGGCGGTCGCGCTGGCGCTCGCGCTGGCGTCCGTCGCCGCT GTCGCCGGCGAGGTCTTCTTCCAGGAGAAGTTCGAAGATGGATGGGAAAGTCGGTGGGTC AAGTCAGAATGGAAGAAGGATGAGAACATGGCTGGTGAATGGAACCACACATCTGGGAAG TGGAATGGAGATCCTGAGGACAAAGGTATCCAAACCTCTGAGGACTACAGGTTCTACGCT ATTTCAGCGGAGTACCCAGAATTCAGCAACAAGGATAAAACCCTGGTGCTGCAGTTCTCT GTAAAGCATGAGCAAAAGCTTGACTGTGGTGGTGGATATGTCAAGTTGCTTGGTGGTGAT GTTGACCAGAAGAAATTTGGTGGGGACACACCGTACAGCATTATGTTTGGACCAGACATC TGTGGGTACAGCACCAAGAAGGTCCATACTATCTTTACTAAGAATGACAAGAACCATTTG ATCAAGAAGGATGTCCCCTGCGAGACTGATCAGCTGTCCCATGTGTACACTTTGATCATC CATCCTGATGCTACATACACCATACTTATTGACAATGTTGAGAAGCAATCTGGCAGCATC TACGAGCACTGGGATATTCTGCCTCCGAAGCAAATCAAGGACCCAGAAGCTAAGAAGCCA GAGGACTGGGATGACAAGGAGTACATTCCTGACCCTGAGGACAAGAAGCCTGAGGGATAC GATGATATTCCCAAGGAAATCCCTGACCCTGATGCTAAGAAGCCTGAGGACTGGGATGAT GAGGAAGATGGTGAGTGGACTGCACCAACCATTCCTAACCCTGAGTACAAGGGACCATGG AAGCAAAAGAAAATCAAGAACCCTAACTACCAAGGCAAATGGAAGGCACCGATGATCGAC AACCCAGACTTCAAGGATGATCCATACATCTATGCTTTTGACAGCCTGAAGTACATTGGC ATTGAGTTGTGGCAGGTCAAATCAGGTACTCTGTTTGACAACTTCCTTATTACTGACGAC CCTGAGTTGGCCAAGACATTCGCAGAGGAGACATGGGGCAAGCACAAGGATGCTGAGAAG GCTGCTTTTGACGAGGCAGAGAAAAAGAAGGAAGAGGAGGAAGCTGCCAAGGCCGGTGAG GACGATGATGATTTGGATGACGAGGATGCTGAGGATGAGGACAAGGCCGATGAGAAGGCT GACTCTGATGCAGAGGATGGCAAGGATTCTGATGATGAGAAGCATGTATGTAACACTCCT GCGTTTTCTTGATACCTTCTGGATTCTGGTGATGCATTTCCTGTTAACCTCCATGTGTCC TGATCACCGTCCTTCCTTTCCAGGATGAGCTCTAAGATGGTGAGGATGAAGAATGGAGGC CGCCTTCGCGACGATGCCAGGATTTGCTAGTTCTCCCATTGTTATGAAGTTCCCTTTTTC GTGATCAGAAACTTGACAAGAAAGTACTCTGTAGATGAGCATTGCTGAGGAACTTTAATT TGGTCTTTGTAGCTCTCTCTGTAGTGTCATTTTTCCCACCACAAGAAAAAGAACTGATAA CTTATTGAACAAGAGAAATCTTTTGC