Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0245200-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:8078976:8082653:-1 gene:Os07g0245200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Polygalacturonase-like protein. (Os07t0245200-01)
Sequence	ATGATGAGCCGATCCGCATCTGCACTTCAAGTCCTTTTGGTTTTTGCAACTGTTTTTGCT GCGACTCAATGGGCCACTTCATCTGCCATGTACTGCAACGACTTGACAGCAAGCGTGCAT CGGCCACACAATAAGGGTGGGGCAGAGCTCTTTGTGCCTGCTGGAAGGTGGTTGACTGGG AGTTTTAATCTTATCAGTCATCTCACTGTGTCACTTGACGCCGATGCAGTAATAATCGGA TCTCAAGATTCATCTGACTGGCCAGTTATTGATCCTCTGCCATCTTATGGGCGTGGCAGA GAACTCCCTGGTAAAAGACACCAGAGTCTTATTTTTGGATCCAATCTTACTGATGTAATA ATAACTGGTGCTAATGGCACCATTGATGGCCAAGGTGAACTTTGGTGGAACTGGTTTCAC AATCACACACTAAATTATACCAGGCCCCCTCTTCTTGAACTGATGTACTCTGACAGGGTT GTTATTTCCAATTTAACCTTCATGAATGCACCATTTTGGAATATTCATCCTGTATACTGC AGCCAAGTTCTTGTCCAGCATCTGACGATCCTAGCACCTATCAGTTCACCAAACACTGAT GGCATTGATCCAGACTCATCCTCAAATGTGTGCATCGAAGATTGCTACATCAGAAACGGC GATGACATTGTCGTCATCAAGAGCGGTTGGGACGAGTATGGTATCTCTTTTGCCCATCCT AGCTCCAACATTAGCATCCGCAACATCACTGGACAGACAAGGAACAGCGCAGGAATAGCC TTTGGAAGCGAGATGTCAGGTGGTATATCAGACGTTCGAGCTGAGGGCCTTCGTTTCATC AACTCGGTGCATGGAATCAGAATCAAGACTGCCCCAGGGCGCGGTGGGTATGTGAAAAAC ATATACATAGCTGATGTGAGCATGGACAATGTCTCAATAGCCATCAGGATCACTGGAAAC TATGGGGAACATCCTGACGACAACTATGACAAGAATGCGCTTCCAGTCATTAGCAACATA ACGATAAAAAATGTGGTGGGGGTAAACATTGGTACTGCAGGAATGTTGCTGGGCATCCAG GGGGATATCTTTAGCAACATTTGCTTATCAAATGTGTCCCTCAGTAGCAAATCTGCTGAT CCTTGGAATTGTTCGCTCATCGAAGGGTTCTCAAATTCTGTAGCTCCTGAGATATGTGAG CAACTTAGGCCCAGCCCTGGGCCAGGCCAAGTATGCTATGATGGTAATAGCTACCCAGTG CCAGCAGCACAGCAGCCATATAAGTCGGGCGCTACCCGGTTACAAAATCCTTTCCTCAAG TTCATTTCTCTATACAGTTAG

Peptide Sequence

PEP ID	Os07t0245200-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:8078976:8082653:-1 gene:Os07g0245200 transcript:Os07t0245200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Polygalacturonase-like protein. (Os07t0245200-01)
Sequence	MMSRSASALQVLLVFATVFAATQWATSSAMYCNDLTASVHRPHNKGGAELFVPAGRWLTG SFNLISHLTVSLDADAVIIGSQDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTDVI ITGANGTIDGQGELWWNWFHNHTLNYTRPPLLELMYSDRVVISNLTFMNAPFWNIHPVYC SQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHP SSNISIRNITGQTRNSAGIAFGSEMSGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKN IYIADVSMDNVSIAIRITGNYGEHPDDNYDKNALPVISNITIKNVVGVNIGTAGMLLGIQ GDIFSNICLSNVSLSSKSADPWNCSLIEGFSNSVAPEICEQLRPSPGPGQVCYDGNSYPV PAAQQPYKSGATRLQNPFLKFISLYS

Transcript Sequence

Transcript ID	Os07t0245200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:8078976:8082653:-1 gene:Os07g0245200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Polygalacturonase-like protein. (Os07t0245200-01)
Sequence	TCCAGTCCTACTCTTCTCTTTGCTGCCGCTTGGAGCCGGAGAAGGTGATGGGGAGTGAGT GTGTTGAGTGAAGCCATCGGCATAGCCGTCGCCGTCGACGCCGCTGCGTTCGCGGCCCGA GAAGGCGAGCCCGGAGAAGTAGAGAGTCGTCGATCTTGGCTGTTGTTCTGGTGTGGTGCC TGCTGGTGAGTCGATTTGAGGGAGGAAGAACTGACTTGACAGTTTCTTCACTCGCTGCTA GAGAAAATGATGAGCCGATCCGCATCTGCACTTCAAGTCCTTTTGGTTTTTGCAACTGTT TTTGCTGCGACTCAATGGGCCACTTCATCTGCCATGTACTGCAACGACTTGACAGCAAGC GTGCATCGGCCACACAATAAGGGTGGGGCAGAGCTCTTTGTGCCTGCTGGAAGGTGGTTG ACTGGGAGTTTTAATCTTATCAGTCATCTCACTGTGTCACTTGACGCCGATGCAGTAATA ATCGGATCTCAAGATTCATCTGACTGGCCAGTTATTGATCCTCTGCCATCTTATGGGCGT GGCAGAGAACTCCCTGGTAAAAGACACCAGAGTCTTATTTTTGGATCCAATCTTACTGAT GTAATAATAACTGGTGCTAATGGCACCATTGATGGCCAAGGTGAACTTTGGTGGAACTGG TTTCACAATCACACACTAAATTATACCAGGCCCCCTCTTCTTGAACTGATGTACTCTGAC AGGGTTGTTATTTCCAATTTAACCTTCATGAATGCACCATTTTGGAATATTCATCCTGTA TACTGCAGCCAAGTTCTTGTCCAGCATCTGACGATCCTAGCACCTATCAGTTCACCAAAC ACTGATGGCATTGATCCAGACTCATCCTCAAATGTGTGCATCGAAGATTGCTACATCAGA AACGGCGATGACATTGTCGTCATCAAGAGCGGTTGGGACGAGTATGGTATCTCTTTTGCC CATCCTAGCTCCAACATTAGCATCCGCAACATCACTGGACAGACAAGGAACAGCGCAGGA ATAGCCTTTGGAAGCGAGATGTCAGGTGGTATATCAGACGTTCGAGCTGAGGGCCTTCGT TTCATCAACTCGGTGCATGGAATCAGAATCAAGACTGCCCCAGGGCGCGGTGGGTATGTG AAAAACATATACATAGCTGATGTGAGCATGGACAATGTCTCAATAGCCATCAGGATCACT GGAAACTATGGGGAACATCCTGACGACAACTATGACAAGAATGCGCTTCCAGTCATTAGC AACATAACGATAAAAAATGTGGTGGGGGTAAACATTGGTACTGCAGGAATGTTGCTGGGC ATCCAGGGGGATATCTTTAGCAACATTTGCTTATCAAATGTGTCCCTCAGTAGCAAATCT GCTGATCCTTGGAATTGTTCGCTCATCGAAGGGTTCTCAAATTCTGTAGCTCCTGAGATA TGTGAGCAACTTAGGCCCAGCCCTGGGCCAGGCCAAGTATGCTATGATGGTAATAGCTAC CCAGTGCCAGCAGCACAGCAGCCATATAAGTCGGGCGCTACCCGGTTACAAAATCCTTTC CTCAAGTTCATTTCTCTATACAGTTAGACGCCCCAATCATCAACTATGTCCTTGTAGATT TTTATTTTTGGTGCAAGTGATTGTTGAAGACTTCCAATTTTGCCTTAAGGCTTGCCTTGT GTAGTCGTGTGTATAGAGCTTTGTGGAGATAACTGTTGGTGTGATGTTATTATTTCAATG TCCTGTATTGTTTGGATTCTTACTCTAAATAAAAGCAACCCATGTTTATAACTTC