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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0243800-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:8009180:8009857:-1 gene:Os07g0243800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PR-1a pathogenesis related protein (Hv-1a). (Os07t0243800-00)
Sequence

ATGGGAAGTGTACCGAAGAAAGGAGCTGCCTTTGCTCTGGCGGTGGCCATTGCGACCATC
GTGATGGCGACCACCACGACGATGGCCGCCGACCTGTCGGACGCCGAGAAGGCACAGTTC
GTCAAGCTCCACAACGACGCCCGGGCCGCGGTCGGCGTCAAGGCGCAGGTGTCGTGGAGC
GAGGCGGTGGCGGCGAAGGCCCGGGAGCACGCCAGCACGTGCCGGACGGACCACATACAG
GGGCCCTACGGCGAGAACCTGTGGTGGGGGTGGAGCAGCACCGCCGGCTGGGTCGGGAAG
CCAGCGGACGCGATGGGGAGCTGGGTGGGCGAGAAGCCGTACTACGATCGCAGCAGCAAC
AAATGCGTCGGCGGGAAGGTGTGCGGCCACTACACGCAGGTGGTGTGGAGCCGCACCACC
CAGATCGGCTGCGCGCGCGTCACCGGCTGCAACATCAACGGTCGCAGCAGCACGCTGATC
GCCTGCAACTACAACCCGCGTGGCAACATTAACGGGGAGCGCCCCTACTAG

Peptide Sequence

PEP ID

Os07t0243800-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:8009180:8009857:-1 gene:Os07g0243800 transcript:Os07t0243800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PR-1a pathogenesis related protein (Hv-1a). (Os07t0243800-00)
Sequence

MGSVPKKGAAFALAVAIATIVMATTTTMAADLSDAEKAQFVKLHNDARAAVGVKAQVSWS
EAVAAKAREHASTCRTDHIQGPYGENLWWGWSSTAGWVGKPADAMGSWVGEKPYYDRSSN
KCVGGKVCGHYTQVVWSRTTQIGCARVTGCNINGRSSTLIACNYNPRGNINGERPY

Transcript Sequence

Transcript ID

Os07t0243800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:8009180:8009857:-1 gene:Os07g0243800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PR-1a pathogenesis related protein (Hv-1a). (Os07t0243800-00)
Sequence

ATGGGAAGTGTACCGAAGAAAGGAGCTGCCTTTGCTCTGGCGGTGGCCATTGCGACCATC
GTGATGGCGACCACCACGACGATGGCCGCCGACCTGTCGGACGCCGAGAAGGCACAGTTC
GTCAAGCTCCACAACGACGCCCGGGCCGCGGTCGGCGTCAAGGCGCAGGTGTCGTGGAGC
GAGGCGGTGGCGGCGAAGGCCCGGGAGCACGCCAGCACGTGCCGGACGGACCACATACAG
GGGCCCTACGGCGAGAACCTGTGGTGGGGGTGGAGCAGCACCGCCGGCTGGGTCGGGAAG
CCAGCGGACGCGATGGGGAGCTGGGTGGGCGAGAAGCCGTACTACGATCGCAGCAGCAAC
AAATGCGTCGGCGGGAAGGTGTGCGGCCACTACACGCAGGTGGTGTGGAGCCGCACCACC
CAGATCGGCTGCGCGCGCGTCACCGGCTGCAACATCAACGGTCGCAGCAGCACGCTGATC
GCCTGCAACTACAACCCGCGTGGCAACATTAACGGGGAGCGCCCCTACTAGCTACGTTAA
GCCGATCGAGTCTCCTCTAATAAACTGCTCTCTAACGTGGGTTACTAGCTAATACTATAT
GGGTTCGGTATAATTAAGAACCTACATATTAGTTAGAGAGCGTACTAAGTTAGAGGATCC
GTTTCTATATGCATGAAT