Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0243200-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:7983125:7989283:-1 gene:Os07g0243200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 4 description:Plastidic large subunit of ADP-glucose pyrophosphorylase (AGP), Starch synthesis in rice pollen (Os07t0243200-01)
Sequence	ATGGCGACCTGCTCGTGGGCCGCCACCACGGCGGCGGCGGCGCCCCCCCGCCCGCCCGCC AGGTGCCGCTCGCGCGTCGCCGCGCTCCGCCGCACGGCCGCCGCCTCCGCCGCCGCCGCC AGCTGCGTCCTCGCCGAAGCGCCCAAGGGGCTCAAGGTGGAGCAGGCGGATGCGGTCGAG CCAGCGGCGGCGGCGGCGGCGCGGAGGGACGTGGGGCCGGACACGGTGGCGTCCATCATC CTCGGCGGCGGCGCCGGCACGCGCCTCTTCCCTCTCACGCGGACCAGGGCCAAGCCCGCG GTGCCTGTTGGGGGATGTTACAGGCTGATCGATATCCCGATGAGCAACTGCATAAACAGC AAGATCAACAAGATCTACGTTCTCACCCAGTTCAACTCCCAGTCTCTCAACCGTCACATC GCGCGCACTTATAACATTGGCGAGGGGGTTGGATTTGGTGATGGCTTTGTGGAGGTGCTG GCAGCTACCCAGACAACAGGGGAATCAGGAAAGCGATGGTTCCAGGGAACAGCCGATGCT GTCAGGCAGTTCCTGTGGCTATTTGAGGATGCAAGGCTCAAACGCATAGAGAACATACTA ATTCTATCTGGTGATCATCTGTATAGGATGGATTATATGGACTTTGTCCAGAAGCATGTT GACAAAGGTGCTGATATTTCAGTCGCTTGTGTTCCTGTGGATGAGAGTCGAGCTTCTGAT TTTGGATTGATGAAGACTGACAAGAATGGACGCATTACTGATTTTCTCGAAAAGCCCAAG GATGAAAGCTTGAAATCAATGCAACTAGATATGGGAACTTTTGGTTTGCGCCCAGAAGTT GCAGATACATGCAAATACATGGCTTCAATGGGAATATATGTATTCAGGACTGATATCTTG TTAAGACTTCTAAGAGGACATTATCCTACAGCGAATGATTTTGGGTCAGAAGTTATCCCA ATGGCTGCAAAAGACTACAATGTGCAGGCCTATCTATTTGATGGTTACTGGGAAGATATT GGGACAATAAAGTCATTCTTTGAGGCAAATCTTGCTCTCACAGATCAGTCGCCAAACTTC TATTTTTATGATCCTGTGAAGCCCATATTCACATCTCCTAGATTTTTACCTCCAACGAAA GTAGAAAACTGCAAGGTTCTGAACTCTATAGTTTCCCATGGGTGCTTTCTAACAGAATGT AGTGTTGATCGCTCTGTTATTGGTGTCCGTTCAAGATTAGAACCGGGGGTGCAGCTGAAG GACACCATGATGATGGGGGCAGATTACTATCAGACTGAAGCTGAGAGATTTTCTGAATTG TCTGATGGAAAAGTACCAGTTGGCGTTGGAGAAAACACCATAATAAGGAACTGTATCATC GACAAGAATGCTCGAATTGGAAAGAATGTAATGATTATGAACTCACAGAATGTGCAAGAA GCAGAGAGACCATTAGAGGGTTTCTACATTCGTTCTGGGATAACGGTAGTGCTTAAAAAT GCGGTGATTCCAGATGGTACAGTTATCTAG

Peptide Sequence

PEP ID	Os07t0243200-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:7983125:7989283:-1 gene:Os07g0243200 transcript:Os07t0243200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 4 description:Plastidic large subunit of ADP-glucose pyrophosphorylase (AGP), Starch synthesis in rice pollen (Os07t0243200-01)
Sequence	MATCSWAATTAAAAPPRPPARCRSRVAALRRTAAASAAAASCVLAEAPKGLKVEQADAVE PAAAAAARRDVGPDTVASIILGGGAGTRLFPLTRTRAKPAVPVGGCYRLIDIPMSNCINS KINKIYVLTQFNSQSLNRHIARTYNIGEGVGFGDGFVEVLAATQTTGESGKRWFQGTADA VRQFLWLFEDARLKRIENILILSGDHLYRMDYMDFVQKHVDKGADISVACVPVDESRASD FGLMKTDKNGRITDFLEKPKDESLKSMQLDMGTFGLRPEVADTCKYMASMGIYVFRTDIL LRLLRGHYPTANDFGSEVIPMAAKDYNVQAYLFDGYWEDIGTIKSFFEANLALTDQSPNF YFYDPVKPIFTSPRFLPPTKVENCKVLNSIVSHGCFLTECSVDRSVIGVRSRLEPGVQLK DTMMMGADYYQTEAERFSELSDGKVPVGVGENTIIRNCIIDKNARIGKNVMIMNSQNVQE AERPLEGFYIRSGITVVLKNAVIPDGTVI

Transcript Sequence

Transcript ID	Os07t0243200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:7983125:7989283:-1 gene:Os07g0243200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 4 description:Plastidic large subunit of ADP-glucose pyrophosphorylase (AGP), Starch synthesis in rice pollen (Os07t0243200-01)
Sequence	TCCCCTCCCCTCTCCTACTCCGCCACCTTCGCCCTTCTAGAACCTTCCCGCGTCCGCCAA TGGCGACCTGCTCGTGGGCCGCCACCACGGCGGCGGCGGCGCCCCCCCGCCCGCCCGCCA GGTGCCGCTCGCGCGTCGCCGCGCTCCGCCGCACGGCCGCCGCCTCCGCCGCCGCCGCCA GCTGCGTCCTCGCCGAAGCGCCCAAGGGGCTCAAGGTGGAGCAGGCGGATGCGGTCGAGC CAGCGGCGGCGGCGGCGGCGCGGAGGGACGTGGGGCCGGACACGGTGGCGTCCATCATCC TCGGCGGCGGCGCCGGCACGCGCCTCTTCCCTCTCACGCGGACCAGGGCCAAGCCCGCGG TGCCTGTTGGGGGATGTTACAGGCTGATCGATATCCCGATGAGCAACTGCATAAACAGCA AGATCAACAAGATCTACGTTCTCACCCAGTTCAACTCCCAGTCTCTCAACCGTCACATCG CGCGCACTTATAACATTGGCGAGGGGGTTGGATTTGGTGATGGCTTTGTGGAGGTGCTGG CAGCTACCCAGACAACAGGGGAATCAGGAAAGCGATGGTTCCAGGGAACAGCCGATGCTG TCAGGCAGTTCCTGTGGCTATTTGAGGATGCAAGGCTCAAACGCATAGAGAACATACTAA TTCTATCTGGTGATCATCTGTATAGGATGGATTATATGGACTTTGTCCAGAAGCATGTTG ACAAAGGTGCTGATATTTCAGTCGCTTGTGTTCCTGTGGATGAGAGTCGAGCTTCTGATT TTGGATTGATGAAGACTGACAAGAATGGACGCATTACTGATTTTCTCGAAAAGCCCAAGG ATGAAAGCTTGAAATCAATGCAACTAGATATGGGAACTTTTGGTTTGCGCCCAGAAGTTG CAGATACATGCAAATACATGGCTTCAATGGGAATATATGTATTCAGGACTGATATCTTGT TAAGACTTCTAAGAGGACATTATCCTACAGCGAATGATTTTGGGTCAGAAGTTATCCCAA TGGCTGCAAAAGACTACAATGTGCAGGCCTATCTATTTGATGGTTACTGGGAAGATATTG GGACAATAAAGTCATTCTTTGAGGCAAATCTTGCTCTCACAGATCAGTCGCCAAACTTCT ATTTTTATGATCCTGTGAAGCCCATATTCACATCTCCTAGATTTTTACCTCCAACGAAAG TAGAAAACTGCAAGGTTCTGAACTCTATAGTTTCCCATGGGTGCTTTCTAACAGAATGTA GTGTTGATCGCTCTGTTATTGGTGTCCGTTCAAGATTAGAACCGGGGGTGCAGCTGAAGG ACACCATGATGATGGGGGCAGATTACTATCAGACTGAAGCTGAGAGATTTTCTGAATTGT CTGATGGAAAAGTACCAGTTGGCGTTGGAGAAAACACCATAATAAGGAACTGTATCATCG ACAAGAATGCTCGAATTGGAAAGAATGTAATGATTATGAACTCACAGAATGTGCAAGAAG CAGAGAGACCATTAGAGGGTTTCTACATTCGTTCTGGGATAACGGTAGTGCTTAAAAATG CGGTGATTCCAGATGGTACAGTTATCTAGAGAATCACCAAAGGAAATATTTGCAGATATC AATCCCTTCTGGTTTGTTGCATTTGAAGTACATCTTTGAAACTCATAAGGGGATCTGAGT TCGACCTTCAACGTCGATGCAGCAAATAAACTTAATACAGTGCAAAGGTTGCCAGCTTAT GAATGAGGCTAGGAACTGAGGGATATATCACCTGCATCGGCATGGCAAGAACGTTTTGGT TCTTTCGTAAGCGTCAAAAGCAATATATCAAGAACTTCTGCCATGCACATGAATACAGGA TATATATAATACTTAGAAATATTTCATGTCGGTAATTGTATATGCATGTAGAAGCGAGAG GGTATAATCTGTTGTGAGTTAAATGTGATTACATTGAGTAATAATAATTACTTGTAGAAG AAGTACATTTCTGTCACGTTGTAGGGTTTATCTTGTACCGCAAAAAATCACTGACTGTTG CTTATCCATGAATTAACTTCCTCTGATGTATATTTATATTTGTGAATTATCAAGAGATCG AAATAAATACTGTACTACTCTTTGATTGA