Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0240300-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:7790213:7795023:1 gene:Os07g0240300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0153E02-OSIGBa0093I20.13 protein. (Os07t0240300-01)
Sequence

ATGAGCATGGCGTTCTCGTGCGCGGGCGCGCGGCTGCAGCAGGGGCGGGTCGGCGTGGGG
AAATGCCGGGGTGGTGGTGGTGGTGGCGGTGGCGCCGCGGTGGTGAGGCGGAGCGGCTGC
TGCCTCTACCCGGGCGGGAGGAGGGGGCTGGGGGTTAGGGGGATCCGCGCCGAGCTGCCG
CCGCGGGCCTGCGCGGATGGGGGCGGCGGCGCCACCACCTCCGGTTCGACCGTCGCCGTG
CCTGATGCTGGGGAGGTTGCTGACCACGTGAAGGAGGTCGGCGCGGTTGCACCTCCGAGC
GTGCTCCCGAAGGGGGAGCGTGGCGAGGTGGCTGATGTTGACGGCTCGGGTGGGAATGGG
AAGTTACCCTCCAGTGGCGGCGGCGGAGATGGGGATAATGGTGGTGGCGGCGGTGGTGGT
GATGGTGGGGACGGTGGGGATGAAGGGGATGATGAGTTTGGGCCGATCCTGAGTTTTGAT
CAGGTGGTCCAGGAGGTGGAGAAGCGAGGGGTCAGCTTGCCCAGCTTGCCCGCGGATATG
ATTGAGGCCGCAAAGAGCGTCGGGATTCAGAAGCTACTGCTGCTGAGATACTTGGACATG
CAGGCATCGGCTTGGCCGTTGGGTCCAGCCATTAGGTCCTGCTCACTTCTCCGGAACAGG
ATGCTAGTTGACCCTTCATTTCTCTTTAAAATCGGGACTGAGATAGTCATTGACACATGT
TGCGCGACATTCGCGGAGGTACAGAAGAGAGGGGAGGAGTTTTGGTCGGAGTTCGAGTTG
TATGCGGCGGATATGTTGGTAGGCGTAGTTGTTAATGTAGCTTTAGTTGGGATGTTGGCG
CCATATGCTCGATTTGGTGGGGGATCTGCATCTCCAGGTCTTCTTGGGCGTGTTAGGCAT
GCTTATGACTCTCTCCCAAGCAGCGTGTTTGAAGCTGAAAGGCCAGGATATAGTTTTTCC
ATTCAACAACGGATAGGAACATACTTTTTTAAGGGTATTTTATATGGTACAGTTGGATTC
TTTTGTGGTCTTGTGGGTCAAGGAATTGCGAACTTGATAATGACTGCCAAAAGGAGTGTA
AAGAAGTCAGATGATGATGTACCTGTCCCACCTCTGCTCAAAACTTCTGCATTGTGGGGT
GCATTCCTTGGTGTGTCTTCCAACACCCGTTATCAGATTATTAATGGGCTTGAGCGTGTG
GTTGAGGCTTCACCTGTTGCCAAGCGTGTCCCAGCTGTTTCTCTGGCATTCACTGTCGGT
GTGCGCTTTGCAAATAACATTTATGGAGGAATGCAGTTTGTGGACTGGGCTAGAATGACC
GGTTGTCAATGA

Peptide Sequence

PEP ID

Os07t0240300-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:7790213:7795023:1 gene:Os07g0240300 transcript:Os07t0240300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0153E02-OSIGBa0093I20.13 protein. (Os07t0240300-01)
Sequence

MSMAFSCAGARLQQGRVGVGKCRGGGGGGGGAAVVRRSGCCLYPGGRRGLGVRGIRAELP
PRACADGGGGATTSGSTVAVPDAGEVADHVKEVGAVAPPSVLPKGERGEVADVDGSGGNG
KLPSSGGGGDGDNGGGGGGGDGGDGGDEGDDEFGPILSFDQVVQEVEKRGVSLPSLPADM
IEAAKSVGIQKLLLLRYLDMQASAWPLGPAIRSCSLLRNRMLVDPSFLFKIGTEIVIDTC
CATFAEVQKRGEEFWSEFELYAADMLVGVVVNVALVGMLAPYARFGGGSASPGLLGRVRH
AYDSLPSSVFEAERPGYSFSIQQRIGTYFFKGILYGTVGFFCGLVGQGIANLIMTAKRSV
KKSDDDVPVPPLLKTSALWGAFLGVSSNTRYQIINGLERVVEASPVAKRVPAVSLAFTVG
VRFANNIYGGMQFVDWARMTGCQ

Transcript Sequence

Transcript ID

Os07t0240300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:7790213:7795023:1 gene:Os07g0240300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0153E02-OSIGBa0093I20.13 protein. (Os07t0240300-01)
Sequence

GCACGCACGCACGCTCCCCTCCTCCTTCGCGCCGCGCCGCCGCCACTCGCCACCAATCCC
CCTCCTCCACCAACCCCTCCACGCCTCACCTCCTCGCGCTCAAATCCCCCACGATAAATC
GAACCTAATCATTCACCGGATTTTGTTCGGAGTTTTCCGCGATCCGTCGCCTCCTCGTCG
AGCCGCAATCAGTGGTGCGTGGGTGGGCGAGCATGAGCATGGCGTTCTCGTGCGCGGGCG
CGCGGCTGCAGCAGGGGCGGGTCGGCGTGGGGAAATGCCGGGGTGGTGGTGGTGGTGGCG
GTGGCGCCGCGGTGGTGAGGCGGAGCGGCTGCTGCCTCTACCCGGGCGGGAGGAGGGGGC
TGGGGGTTAGGGGGATCCGCGCCGAGCTGCCGCCGCGGGCCTGCGCGGATGGGGGCGGCG
GCGCCACCACCTCCGGTTCGACCGTCGCCGTGCCTGATGCTGGGGAGGTTGCTGACCACG
TGAAGGAGGTCGGCGCGGTTGCACCTCCGAGCGTGCTCCCGAAGGGGGAGCGTGGCGAGG
TGGCTGATGTTGACGGCTCGGGTGGGAATGGGAAGTTACCCTCCAGTGGCGGCGGCGGAG
ATGGGGATAATGGTGGTGGCGGCGGTGGTGGTGATGGTGGGGACGGTGGGGATGAAGGGG
ATGATGAGTTTGGGCCGATCCTGAGTTTTGATCAGGTGGTCCAGGAGGTGGAGAAGCGAG
GGGTCAGCTTGCCCAGCTTGCCCGCGGATATGATTGAGGCCGCAAAGAGCGTCGGGATTC
AGAAGCTACTGCTGCTGAGATACTTGGACATGCAGGCATCGGCTTGGCCGTTGGGTCCAG
CCATTAGGTCCTGCTCACTTCTCCGGAACAGGATGCTAGTTGACCCTTCATTTCTCTTTA
AAATCGGGACTGAGATAGTCATTGACACATGTTGCGCGACATTCGCGGAGGTACAGAAGA
GAGGGGAGGAGTTTTGGTCGGAGTTCGAGTTGTATGCGGCGGATATGTTGGTAGGCGTAG
TTGTTAATGTAGCTTTAGTTGGGATGTTGGCGCCATATGCTCGATTTGGTGGGGGATCTG
CATCTCCAGGTCTTCTTGGGCGTGTTAGGCATGCTTATGACTCTCTCCCAAGCAGCGTGT
TTGAAGCTGAAAGGCCAGGATATAGTTTTTCCATTCAACAACGGATAGGAACATACTTTT
TTAAGGGTATTTTATATGGTACAGTTGGATTCTTTTGTGGTCTTGTGGGTCAAGGAATTG
CGAACTTGATAATGACTGCCAAAAGGAGTGTAAAGAAGTCAGATGATGATGTACCTGTCC
CACCTCTGCTCAAAACTTCTGCATTGTGGGGTGCATTCCTTGGTGTGTCTTCCAACACCC
GTTATCAGATTATTAATGGGCTTGAGCGTGTGGTTGAGGCTTCACCTGTTGCCAAGCGTG
TCCCAGCTGTTTCTCTGGCATTCACTGTCGGTGTGCGCTTTGCAAATAACATTTATGGAG
GAATGCAGTTTGTGGACTGGGCTAGAATGACCGGTTGTCAATGAGGTGAAGGCATTCTTA
TTTTCATGTTATCATTCACAGCGATGTGGAGTGTTGCCAGCCATAGACTCCCAAAATTTG
TCGAATTTGCTCCGTCTCTATTTAAAGATGTGATGCTATTACCAATAATTGCATTGCTGC
AGAGCTCCAAAATAAATGAGGTCGTATGTTCTGTTTAGAATGCAACAGGATTCATTGTAA
AATCAGGAAAGTTTCAGCATGTCATAGTGCTTAGCCTTCCATATGCGCAAATCAGTAGCT
CCAAGATTTAGAAGATTGGATGTATATTGAATTCGGTTGTTTCTCTTGTCGAATAAATTC
GGTCATCTTGGTTTGGGCT