Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0236800-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:7621498:7626660:1 gene:Os07g0236800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Snf7 family protein. (Os07t0236800-01)
Sequence

ATGAGTTTCTTGTTCGGGAAGCGGAAGACGCCTGCTGAGCTCTTGAGAGAGAACAAGAGA
ATGCTGGATCGATCAATAAGGGAAATTGAACGAGAAAGACAGGGATTGCAAGCCCAGGAG
AAAAAACTCATTACTGAGATTAAGAAAACAGCAAAGGAAGGCCAGATGGGTGCTGTCAAA
GTAATGGCCAAAGATCTTATTCGAACACGGCATCAGATCACAAAGTTTTACCAACTTAAA
TCTCAGCTTCAAGGAGTTTCTCTAAGAGTTCAGACGCTGAAATCTACACAAGCTATGGGT
GATGCCATGAAAGGTGTTACAAAGGCTATGGGTCAGATGAACAGGCAGTTAAATCTGCCA
GGATTACAGAGGATTATGATGGAGTTTGAGCGACAAAATGAGAGAATGGAGATGACGAGT
GAAGTCATGGGGGATGCTATAGATGATGCTTTGGAGGGAGATGAGGATCAAGAGGAAGAA
ACTGAGGAGCTTGTGAATCAAGTCCTTGATGAAATTGGCATTGATATTAACCAAGAGCTT
GTAAAGGCCCCTTCGGCTGCCGTCGCTCAGCCCGCAGCAGCAGGAAAGGTTGCGCAGGCT
GAATCTGCTGGTGGGAATGGTGACGGTGGAATCGACGCGGATTTGCAGGCGAGGCTGGAC
AATCTGAGGAGAATGTAG

Peptide Sequence

PEP ID

Os07t0236800-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:7621498:7626660:1 gene:Os07g0236800 transcript:Os07t0236800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Snf7 family protein. (Os07t0236800-01)
Sequence

MSFLFGKRKTPAELLRENKRMLDRSIREIERERQGLQAQEKKLITEIKKTAKEGQMGAVK
VMAKDLIRTRHQITKFYQLKSQLQGVSLRVQTLKSTQAMGDAMKGVTKAMGQMNRQLNLP
GLQRIMMEFERQNERMEMTSEVMGDAIDDALEGDEDQEEETEELVNQVLDEIGIDINQEL
VKAPSAAVAQPAAAGKVAQAESAGGNGDGGIDADLQARLDNLRRM

Transcript Sequence

Transcript ID

Os07t0236800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:7621498:7626660:1 gene:Os07g0236800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Snf7 family protein. (Os07t0236800-01)
Sequence

GCAAACTACTCCTCCTCTCCTCCTAGCGAAGAGAAGGGAAAGGGTAGCGAAGCCGCCATC
GGCGTCGGCGAGCGAGGAGAAGCCAAATTCCTCTACTCGATCCGAGCTCCTTCGATTCGA
TCCACCTCGTCTCGGTTCCTCTCCACCCCGCCTGCCAAGATGAGTTTCTTGTTCGGGAAG
CGGAAGACGCCTGCTGAGCTCTTGAGAGAGAACAAGAGAATGCTGGATCGATCAATAAGG
GAAATTGAACGAGAAAGACAGGGATTGCAAGCCCAGGAGAAAAAACTCATTACTGAGATT
AAGAAAACAGCAAAGGAAGGCCAGATGGGTGCTGTCAAAGTAATGGCCAAAGATCTTATT
CGAACACGGCATCAGATCACAAAGTTTTACCAACTTAAATCTCAGCTTCAAGGAGTTTCT
CTAAGAGTTCAGACGCTGAAATCTACACAAGCTATGGGTGATGCCATGAAAGGTGTTACA
AAGGCTATGGGTCAGATGAACAGGCAGTTAAATCTGCCAGGATTACAGAGGATTATGATG
GAGTTTGAGCGACAAAATGAGAGAATGGAGATGACGAGTGAAGTCATGGGGGATGCTATA
GATGATGCTTTGGAGGGAGATGAGGATCAAGAGGAAGAAACTGAGGAGCTTGTGAATCAA
GTCCTTGATGAAATTGGCATTGATATTAACCAAGAGCTTGTAAAGGCCCCTTCGGCTGCC
GTCGCTCAGCCCGCAGCAGCAGGAAAGGTTGCGCAGGCTGAATCTGCTGGTGGGAATGGT
GACGGTGGAATCGACGCGGATTTGCAGGCGAGGCTGGACAATCTGAGGAGAATGTAGATT
TCCGACCGGTGCTGTGCTGCACTAACTAAAAAAAGAGTGCTAGTGCCTTGTAGCACCATA
TCTTGTGAATATGTATTTTCTACTAAAAGATTTGCAAGTGTACTTAGAGATTTGGAAATA
CATACTCGATATGTGGTATACTTTATACTAATAATGATCGATGAGCAACCTCTTTGCTCC
GATGTGTCATTCTTCTTAC