Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0235800-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:7545547:7549914:1 gene:Os07g0235800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUPERNUMERARY BRACT GENE description:AP2 domain containing transcription factor, Control of inflorescence architecture, Floral meristem establishment (Os07t0235800-01)
Sequence	ATGGTGCTGGATCTCAATGTGGAGTCGCCGGGTGGGTCGGCGGCGACGTCGAGCTCGTCC ACGCCGCCGCCGCCGCCCGACGGTGGCGGCGGGGGGTACTTCCGGTTCGACCTGCTCGGC GGGAGCCCCGACGAGGACGGGTGCTCCTCGCCTGTCATGACGCGCCAGCTCTTCCCTTCG CCGTCTGCGGTGGTGGCGCTGGCGGGGGACGGGTCGTCGACGCCACCGCTGACGATGCCG ATGCCGGCGGCGGCTGGGGAGGGGCCGTGGCCGCGCCGCGCGGCGGATCTCGGGGTGGCG CAGAGCCAGAGGTCCCCCGCCGGCGGGAAGAAGAGCCGCCGCGGCCCGAGGTCTCGGAGC TCCCAGTACAGGGGCGTCACCTTCTACAGGAGGACCGGGCGATGGGAGTCGCACATCTGG GACTGCGGGAAGCAGGTGTACCTGGGTGGTTTCGATACAGCTCATGCCGCAGCGAGGGCC TATGATCGCGCGGCGATCAAGTTCAGAGGCCTCGACGCGGATATCAACTTTAATCTGAAT GACTATGAGGACGACTTGAAGCAGATGCGCAATTGGACCAAGGAGGAGTTTGTGCACATA CTTCGGCGCCAAAGCACAGGATTTGCAAGGGGGAGCTCAAAGTACCGGGGTGTGACACTG CACAAGTGTGGCCGGTGGGAAGCTCGGATGGGCCAGCTGCTCGGCAAGAAGTACATCTAT CTAGGATTGTTTGACAGTGAAATTGAGGCTGCAAGAGCATATGACCGGGCAGCTATCCGC TTCAATGGAAGGGAAGCTGTTACTAATTTTGATCCTAGTTCTTATGATGGAGATGTTCTA CCTGAAACCGACAATGAAGTGGTTGATGGAGACATCATTGACTTAAATCTGAGAATTTCA CAGCCTAACGTTCATGAGCTGAAAAGTGATGGTACCCTAACTGGGTTCCAGTTGAATTGT GATTCTCCTGAAGCTTCAAGTTCTGTTGTTACTCAGCCAATAAGTCCTCAGTGGCCTGTG CTTCCTCAGGGCACATCGATGTCCCAGCATCCACATTTATATGCATCTCCTTGTCCGGGC TTCTTTGTGAACCTCAGGGAAGTACCTATGGAGAAAAGACCTGAGTTGGGTCCCCAGTCG TTCCCTACTTCGTGGTCATGGCAAATGCAGGGCTCCCCTTTGCCATTACTCCCTACTGCA GCATCATCAGGATTCTCTACGGGCACCGTCGCCGACGCCGCCCGCTCGCCTTCCTCCCGC CCCCATCCATTTCCCGGCCACCACCAGTTCTACTTCCCCCCGACCGCCTGA

Peptide Sequence

PEP ID	Os07t0235800-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:7545547:7549914:1 gene:Os07g0235800 transcript:Os07t0235800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUPERNUMERARY BRACT GENE description:AP2 domain containing transcription factor, Control of inflorescence architecture, Floral meristem establishment (Os07t0235800-01)
Sequence	MVLDLNVESPGGSAATSSSSTPPPPPDGGGGGYFRFDLLGGSPDEDGCSSPVMTRQLFPS PSAVVALAGDGSSTPPLTMPMPAAAGEGPWPRRAADLGVAQSQRSPAGGKKSRRGPRSRS SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNLN DYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQLLGKKYIY LGLFDSEIEAARAYDRAAIRFNGREAVTNFDPSSYDGDVLPETDNEVVDGDIIDLNLRIS QPNVHELKSDGTLTGFQLNCDSPEASSSVVTQPISPQWPVLPQGTSMSQHPHLYASPCPG FFVNLREVPMEKRPELGPQSFPTSWSWQMQGSPLPLLPTAASSGFSTGTVADAARSPSSR PHPFPGHHQFYFPPTA

Transcript Sequence

Transcript ID	Os07t0235800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:7545547:7549914:1 gene:Os07g0235800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUPERNUMERARY BRACT GENE description:AP2 domain containing transcription factor, Control of inflorescence architecture, Floral meristem establishment (Os07t0235800-01)
Sequence	ACGTCCCATCCATCCCTCCCCCCCCTTTTCCCTCCTCCTCCACCTCCACTGCCATGGCCG CCTCCGCCGCTCCTCTCTCCCGCGTGGTAGCCGCCGCCGGTTGCCGCCGCTAGGGGAGCG CGACGGGGGAACGGTAGGGGCGACCCAGCTCGCTCTGTCGCCCCGCGGCTGGTGGGGGTG CGCGCGGGGGAGAGCGGTTGGTTAGTATGGTGCTGGATCTCAATGTGGAGTCGCCGGGTG GGTCGGCGGCGACGTCGAGCTCGTCCACGCCGCCGCCGCCGCCCGACGGTGGCGGCGGGG GGTACTTCCGGTTCGACCTGCTCGGCGGGAGCCCCGACGAGGACGGGTGCTCCTCGCCTG TCATGACGCGCCAGCTCTTCCCTTCGCCGTCTGCGGTGGTGGCGCTGGCGGGGGACGGGT CGTCGACGCCACCGCTGACGATGCCGATGCCGGCGGCGGCTGGGGAGGGGCCGTGGCCGC GCCGCGCGGCGGATCTCGGGGTGGCGCAGAGCCAGAGGTCCCCCGCCGGCGGGAAGAAGA GCCGCCGCGGCCCGAGGTCTCGGAGCTCCCAGTACAGGGGCGTCACCTTCTACAGGAGGA CCGGGCGATGGGAGTCGCACATCTGGGACTGCGGGAAGCAGGTGTACCTGGGTGGTTTCG ATACAGCTCATGCCGCAGCGAGGGCCTATGATCGCGCGGCGATCAAGTTCAGAGGCCTCG ACGCGGATATCAACTTTAATCTGAATGACTATGAGGACGACTTGAAGCAGATGCGCAATT GGACCAAGGAGGAGTTTGTGCACATACTTCGGCGCCAAAGCACAGGATTTGCAAGGGGGA GCTCAAAGTACCGGGGTGTGACACTGCACAAGTGTGGCCGGTGGGAAGCTCGGATGGGCC AGCTGCTCGGCAAGAAGTACATCTATCTAGGATTGTTTGACAGTGAAATTGAGGCTGCAA GAGCATATGACCGGGCAGCTATCCGCTTCAATGGAAGGGAAGCTGTTACTAATTTTGATC CTAGTTCTTATGATGGAGATGTTCTACCTGAAACCGACAATGAAGTGGTTGATGGAGACA TCATTGACTTAAATCTGAGAATTTCACAGCCTAACGTTCATGAGCTGAAAAGTGATGGTA CCCTAACTGGGTTCCAGTTGAATTGTGATTCTCCTGAAGCTTCAAGTTCTGTTGTTACTC AGCCAATAAGTCCTCAGTGGCCTGTGCTTCCTCAGGGCACATCGATGTCCCAGCATCCAC ATTTATATGCATCTCCTTGTCCGGGCTTCTTTGTGAACCTCAGGGAAGTACCTATGGAGA AAAGACCTGAGTTGGGTCCCCAGTCGTTCCCTACTTCGTGGTCATGGCAAATGCAGGGCT CCCCTTTGCCATTACTCCCTACTGCAGCATCATCAGGATTCTCTACGGGCACCGTCGCCG ACGCCGCCCGCTCGCCTTCCTCCCGCCCCCATCCATTTCCCGGCCACCACCAGTTCTACT TCCCCCCGACCGCCTGACTGCCACCTATTCTGGTGGAGGCGACACCTCACCGTGCATCCA CCGCCGCTTGCTGATAACATTCGTCGTTTGTCCAGAGAGGGACCTTCTCCATATGATATC CCTCTCTATGTTCCACCTGGTTATGATCAGAATTCTCACGCTCATGATTCTTTTATCTTC ATTTTTGAGTGCGAAACCACGAATCGTGACCGTGCTACCAGGTAAACACCCTTGTACCTC TTTGACTCTACAATAAAATTAATGTAAGATATTCTGGCTAAAAGTGATTGGCCCTCCCTA CTGTATTTTTACAGAGTTGTAATTTGAACAGTGGGCACTAAAGCTGGGGCCCACTCGCAC CAGTGTCTAGTGGAGCGAAGCTTTGCCCTTTTCTTGCTATCCAGCAACTATTCCTCCGCC TGCCTCCATTGCTGACAGTGGAGATAGCTTCCCAGTGGTCACTGTTCCACTGTACTCTGT CATAGTTTCTGATCACCCCT