Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0232900-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:7405745:7409553:-1 gene:Os07g0232900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAVY METAL ATPASE 3 description:Heavy metal-transporting P1B-ATPase, Root-to-shoot cadmium (Cd) translocation (Os07t0232900-01)
Sequence	ATGGCCGGAAAGGATGAGGCGGAAGGGCTCGAGGCGAGGCTGCTGCTGCTGCCGCCTGAG GCGGCGGCGGAGGAGCCGACGAGGTGTGGCGGCGGCGACGGCGGCGGCGGCGGGAGGAAG CGGAAGAAGACGTACCTTGATGTCCTTGGCGTGTGCTGCTCCGCGGAGGTCGCGCTGGTG GAGCGGCTGCTCGCGCCGCTCGACGGCGTCCGCGTGGTGTCCGTCGTCGTGGCGTCCCGC ACCGTCGTCGTCGAGCACGACCCCGCCGCCGCCCCGGAGTCCGCCATCGTGAAGGCGCTG AACAAGGCCGGCCTCGAGGCGTCGGTGCGAGCCTACGGCAGCAGCGGCGTGGTCAGCCGG TGGCCGAGCCCGTACATCGTCGCCTCCGGCGTCCTCCTCACGGCGTCCTTCTTCGAGTGG CTCTTCCCTCCCCTGCAGTGCCTGGCCGTGGCGGCCGTCGTCGCCGGCGCGCCGCCGATG GTGCGCCGTGGGTTCGCCGCGGCGAGCCGGCTGTCGCTCGACATCAACGTCCTCATGCTC ATCGCCGTCGCCGGCGCGCTCTGCCTCGGCGACTACACGGAGGCCGGCGCCATCGTCTTC CTCTTCACCACCGCAGAATGGCTCGAGACGCTGGCCTGCACAAAGGCGAGCGCCGGGATG TCGTCGTTGATGGGCATGCTGCCGGTGAAGGCGGTCATCGCGACGACGGGCGAGGTTGTC AGCGTGCGCGACGTCCGCGTGGGCGACGTCGTCGCGGTCAGGGCCGGCGAGATCGTCCCC GTCGACGGCGTGGTGGTCGACGGCCAGAGCGAGGTCGACGAGAGGAGCCTCACCGGCGAG TCCTTCCCGGTGCCGAAGCAGCCGCACTCCGAGGTCTGGGCCGGCACAATGAACTTTGAC GGTTACATTGCTGTGAGAACTACGGCTCTCGCCGAGAACTCGACGGTGGCGAAGATGGAG AGGCTGGTGGAGGCGGCGCAGAACAGCAGGTCGAAGACGCAGCGGCTGATCGATTCGTGC GCAAAGTACTACACGCCGGCCGTGGTGGTTGTTGCAGCAGGAGTGGCCCTGATCCCGGCT CTGCTCGGAGCAGATGGCCTTGAGCAATGGTGGAAGCTGGCTCTGGTGATGCTTGTGAGC GCGTGCCCCTGCGCATTAGTGCTGTCGACACCGGTGGCATCCTTCTGCGCAATGCTGCGC GCTGCGAGGATGGGGATCTTCATCAAGGGTGGAGATGTTCTTGAATCACTTGGGGAGATC AGGGCCGTCGCGTTCGACAAGACCGGGACGATCACCAGAGGAGAGTTCAGCATCGACTCG TTCCATCTGGTTGGGGATCACAAGGTTGAGATGGATCATCTTCTTTACTGGATTGCAAGC ATTGAGAGCAAGTCAAGCCACCCAATGGCAGCTGCACTTGTGGAGTATGCTCAATCCAAA TCCATCCAACCAAACCCGGAAAATGTGGGCGATTTTCGGATATATCCCGGGGAGGGGATC TATGGAGAGATCCATGGAAAGCACATCTACATTGGGAACAGAAGGACATTGGCAAGAGCG TCATCACCTCAGTCAACTCAAGAAATGGGTGAGATGATCAAGGGCGTGTCGATCGGCTAC GTGATCTGCGACGGCGAGCTCGCCGGCGTCTTCTCGCTCTCCGACGACTGCCGGACCGGC GCGGCGGAGGCGATCCGGGAGCTTGGATCGCTGGGCATCAAGTCGGTTATGCTGACCGGG GACAGCAGCGCGGCGGCGACGCACGCGCAGGGCCAGCTCGGCGGCGTCATGGAGGAGCTC CACTCCGAGCTCCTCCCGGAGGACAAGGTCCGGCTCGTCAGCGGCCTCAAGGCGAGGTTC GGCCCGACGATGATGGTCGGGGACGGGATGAACGACGCGGCGGCGCTGGCGGCGGCGGAC GTGGGCGTGTCCATGGGCATCTCCGGGTCGGCGGCGGCGATGGAGACCAGCCACGCGACG CTCATGTCGAGCGACGTGCTCAGGGTCCCCGAGGCCGTCAGGCTCGGCCGGTGCGCCCGC CGGACCATCGCCGTCAACGTGGCCGGCTCGGTGGCCGTGAAGGCCGCCGTGCTCGCGCTG GCCGCGGCGTGGCGCCCCGTGCTCTGGGCCGCCGTGCTCGCCGACGTCGGGACGTGCCTC CTCGTCGTGCTCAACAGCATGACGCTGCTCAGGGAGGAGTGGAAGGGCGGCGCCAAGGAG GACGGCGCGTGCCGCGCCACGGCGAGGTCGCTGGTGATGAGGTCCCAGCTCGCCGCCGAC TCCCAAGCACCCAACGCCGCAGACGCTGGCGCCGCCGGCCGTGAGCAAACGAACGGCTGC CGTTGCTGTCCGAAGCCGGGCATGTCGCCCGAGCACTCGGTTGTCATCGACATCCGAGCC GACGGCGAGCGTCAAGAAGAGCGGCCGGCCGAGGCGGCCGTCGTTGCCAAATGTTGCGGC GGAGGCGGCGGCGAGGGCATCCGCTGCGGAGCCTCCAAGAAGCCAACTGCAACGGTCGTT GTTGCCAAATGTTGCGGGGGCGGCGGCGGCGGCGAGGGCACCAGGTGCGGCGCGTCCAAG AATCCGGCAACGGCGGCCGTCGTTGCCAAATGTTGCAGCGGAGGCGGCGGCGAGGGCATC GGCTGCGGAGCCTCCAAGAAGCCAACTGCAACGGCCGTTGTTGCCAAATGTTGCGGCGGC GGCGGCGAGGGCACCAGGTGCGCCGCGTCCAAGAAGCCGGCAACGGCGGCCGTCGTTGCC AAATGTTGCGGTGGCGATGGCGGCGAGGGCACCGGATGTGGTGCCTCCAAGAGGTCGCCG CCGGCTGAGGGAAGCTGCAGCGGCGGTGAAGGCGGTACCAATGGTGTTGGTCGTTGCTGC ACGAGCGTGAAGAGGCCAACCTGTTGCGACATGGGAGCGGCGGAGGTGTCCGATTCTTCG CCGGAGACGGCGAAAGACTGCAGAAATGGGAGGTGTTGCGCGAAGACGATGAACTCCGGT GAAGTGAAAGGATGA

Peptide Sequence

PEP ID	Os07t0232900-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:7405745:7409553:-1 gene:Os07g0232900 transcript:Os07t0232900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAVY METAL ATPASE 3 description:Heavy metal-transporting P1B-ATPase, Root-to-shoot cadmium (Cd) translocation (Os07t0232900-01)
Sequence	MAGKDEAEGLEARLLLLPPEAAAEEPTRCGGGDGGGGGRKRKKTYLDVLGVCCSAEVALV ERLLAPLDGVRVVSVVVASRTVVVEHDPAAAPESAIVKALNKAGLEASVRAYGSSGVVSR WPSPYIVASGVLLTASFFEWLFPPLQCLAVAAVVAGAPPMVRRGFAAASRLSLDINVLML IAVAGALCLGDYTEAGAIVFLFTTAEWLETLACTKASAGMSSLMGMLPVKAVIATTGEVV SVRDVRVGDVVAVRAGEIVPVDGVVVDGQSEVDERSLTGESFPVPKQPHSEVWAGTMNFD GYIAVRTTALAENSTVAKMERLVEAAQNSRSKTQRLIDSCAKYYTPAVVVVAAGVALIPA LLGADGLEQWWKLALVMLVSACPCALVLSTPVASFCAMLRAARMGIFIKGGDVLESLGEI RAVAFDKTGTITRGEFSIDSFHLVGDHKVEMDHLLYWIASIESKSSHPMAAALVEYAQSK SIQPNPENVGDFRIYPGEGIYGEIHGKHIYIGNRRTLARASSPQSTQEMGEMIKGVSIGY VICDGELAGVFSLSDDCRTGAAEAIRELGSLGIKSVMLTGDSSAAATHAQGQLGGVMEEL HSELLPEDKVRLVSGLKARFGPTMMVGDGMNDAAALAAADVGVSMGISGSAAAMETSHAT LMSSDVLRVPEAVRLGRCARRTIAVNVAGSVAVKAAVLALAAAWRPVLWAAVLADVGTCL LVVLNSMTLLREEWKGGAKEDGACRATARSLVMRSQLAADSQAPNAADAGAAGREQTNGC RCCPKPGMSPEHSVVIDIRADGERQEERPAEAAVVAKCCGGGGGEGIRCGASKKPTATVV VAKCCGGGGGGEGTRCGASKNPATAAVVAKCCSGGGGEGIGCGASKKPTATAVVAKCCGG GGEGTRCAASKKPATAAVVAKCCGGDGGEGTGCGASKRSPPAEGSCSGGEGGTNGVGRCC TSVKRPTCCDMGAAEVSDSSPETAKDCRNGRCCAKTMNSGEVKG

Transcript Sequence

Transcript ID	Os07t0232900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:7405745:7409553:-1 gene:Os07g0232900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAVY METAL ATPASE 3 description:Heavy metal-transporting P1B-ATPase, Root-to-shoot cadmium (Cd) translocation (Os07t0232900-01)
Sequence	ATGGCCGGAAAGGATGAGGCGGAAGGGCTCGAGGCGAGGCTGCTGCTGCTGCCGCCTGAG GCGGCGGCGGAGGAGCCGACGAGGTGTGGCGGCGGCGACGGCGGCGGCGGCGGGAGGAAG CGGAAGAAGACGTACCTTGATGTCCTTGGCGTGTGCTGCTCCGCGGAGGTCGCGCTGGTG GAGCGGCTGCTCGCGCCGCTCGACGGCGTCCGCGTGGTGTCCGTCGTCGTGGCGTCCCGC ACCGTCGTCGTCGAGCACGACCCCGCCGCCGCCCCGGAGTCCGCCATCGTGAAGGCGCTG AACAAGGCCGGCCTCGAGGCGTCGGTGCGAGCCTACGGCAGCAGCGGCGTGGTCAGCCGG TGGCCGAGCCCGTACATCGTCGCCTCCGGCGTCCTCCTCACGGCGTCCTTCTTCGAGTGG CTCTTCCCTCCCCTGCAGTGCCTGGCCGTGGCGGCCGTCGTCGCCGGCGCGCCGCCGATG GTGCGCCGTGGGTTCGCCGCGGCGAGCCGGCTGTCGCTCGACATCAACGTCCTCATGCTC ATCGCCGTCGCCGGCGCGCTCTGCCTCGGCGACTACACGGAGGCCGGCGCCATCGTCTTC CTCTTCACCACCGCAGAATGGCTCGAGACGCTGGCCTGCACAAAGGCGAGCGCCGGGATG TCGTCGTTGATGGGCATGCTGCCGGTGAAGGCGGTCATCGCGACGACGGGCGAGGTTGTC AGCGTGCGCGACGTCCGCGTGGGCGACGTCGTCGCGGTCAGGGCCGGCGAGATCGTCCCC GTCGACGGCGTGGTGGTCGACGGCCAGAGCGAGGTCGACGAGAGGAGCCTCACCGGCGAG TCCTTCCCGGTGCCGAAGCAGCCGCACTCCGAGGTCTGGGCCGGCACAATGAACTTTGAC GGTTACATTGCTGTGAGAACTACGGCTCTCGCCGAGAACTCGACGGTGGCGAAGATGGAG AGGCTGGTGGAGGCGGCGCAGAACAGCAGGTCGAAGACGCAGCGGCTGATCGATTCGTGC GCAAAGTACTACACGCCGGCCGTGGTGGTTGTTGCAGCAGGAGTGGCCCTGATCCCGGCT CTGCTCGGAGCAGATGGCCTTGAGCAATGGTGGAAGCTGGCTCTGGTGATGCTTGTGAGC GCGTGCCCCTGCGCATTAGTGCTGTCGACACCGGTGGCATCCTTCTGCGCAATGCTGCGC GCTGCGAGGATGGGGATCTTCATCAAGGGTGGAGATGTTCTTGAATCACTTGGGGAGATC AGGGCCGTCGCGTTCGACAAGACCGGGACGATCACCAGAGGAGAGTTCAGCATCGACTCG TTCCATCTGGTTGGGGATCACAAGGTTGAGATGGATCATCTTCTTTACTGGATTGCAAGC ATTGAGAGCAAGTCAAGCCACCCAATGGCAGCTGCACTTGTGGAGTATGCTCAATCCAAA TCCATCCAACCAAACCCGGAAAATGTGGGCGATTTTCGGATATATCCCGGGGAGGGGATC TATGGAGAGATCCATGGAAAGCACATCTACATTGGGAACAGAAGGACATTGGCAAGAGCG TCATCACCTCAGTCAACTCAAGAAATGGGTGAGATGATCAAGGGCGTGTCGATCGGCTAC GTGATCTGCGACGGCGAGCTCGCCGGCGTCTTCTCGCTCTCCGACGACTGCCGGACCGGC GCGGCGGAGGCGATCCGGGAGCTTGGATCGCTGGGCATCAAGTCGGTTATGCTGACCGGG GACAGCAGCGCGGCGGCGACGCACGCGCAGGGCCAGCTCGGCGGCGTCATGGAGGAGCTC CACTCCGAGCTCCTCCCGGAGGACAAGGTCCGGCTCGTCAGCGGCCTCAAGGCGAGGTTC GGCCCGACGATGATGGTCGGGGACGGGATGAACGACGCGGCGGCGCTGGCGGCGGCGGAC GTGGGCGTGTCCATGGGCATCTCCGGGTCGGCGGCGGCGATGGAGACCAGCCACGCGACG CTCATGTCGAGCGACGTGCTCAGGGTCCCCGAGGCCGTCAGGCTCGGCCGGTGCGCCCGC CGGACCATCGCCGTCAACGTGGCCGGCTCGGTGGCCGTGAAGGCCGCCGTGCTCGCGCTG GCCGCGGCGTGGCGCCCCGTGCTCTGGGCCGCCGTGCTCGCCGACGTCGGGACGTGCCTC CTCGTCGTGCTCAACAGCATGACGCTGCTCAGGGAGGAGTGGAAGGGCGGCGCCAAGGAG GACGGCGCGTGCCGCGCCACGGCGAGGTCGCTGGTGATGAGGTCCCAGCTCGCCGCCGAC TCCCAAGCACCCAACGCCGCAGACGCTGGCGCCGCCGGCCGTGAGCAAACGAACGGCTGC CGTTGCTGTCCGAAGCCGGGCATGTCGCCCGAGCACTCGGTTGTCATCGACATCCGAGCC GACGGCGAGCGTCAAGAAGAGCGGCCGGCCGAGGCGGCCGTCGTTGCCAAATGTTGCGGC GGAGGCGGCGGCGAGGGCATCCGCTGCGGAGCCTCCAAGAAGCCAACTGCAACGGTCGTT GTTGCCAAATGTTGCGGGGGCGGCGGCGGCGGCGAGGGCACCAGGTGCGGCGCGTCCAAG AATCCGGCAACGGCGGCCGTCGTTGCCAAATGTTGCAGCGGAGGCGGCGGCGAGGGCATC GGCTGCGGAGCCTCCAAGAAGCCAACTGCAACGGCCGTTGTTGCCAAATGTTGCGGCGGC GGCGGCGAGGGCACCAGGTGCGCCGCGTCCAAGAAGCCGGCAACGGCGGCCGTCGTTGCC AAATGTTGCGGTGGCGATGGCGGCGAGGGCACCGGATGTGGTGCCTCCAAGAGGTCGCCG CCGGCTGAGGGAAGCTGCAGCGGCGGTGAAGGCGGTACCAATGGTGTTGGTCGTTGCTGC ACGAGCGTGAAGAGGCCAACCTGTTGCGACATGGGAGCGGCGGAGGTGTCCGATTCTTCG CCGGAGACGGCGAAAGACTGCAGAAATGGGAGGTGTTGCGCGAAGACGATGAACTCCGGT GAAGTGAAAGGATGA