Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0232800-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:7394486:7397577:1 gene:Os07g0232800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC TRANSPORTER 8 description:Similar to Zinc transporter protein ZIP1. (Os07t0232800-00)
Sequence

ATGAGGACGAACACCACCGCCACCGTGCTCCTCGCCGCGGCCGTGGCGCTGCTGCTCGCC
ACGGCGGCGCGCGGCGACGGCGGCGACGGCGGGTGCGGGAAGGAGGATGCGGCGGCGGGG
CGGGACCGGGCGCGGGCGAGGGGGCTCAAGATCGCGGCCTTCTTCTCCATCCTGGTGTGC
GGCGCGCTGGGGTGCGGCCTCCCCTCGCTGGGGCGCCACGTCCCTGCGCTGCGCCCCGAC
GGCGACGTGTTCTTCCTCGTCAAGGCGTTCGCGGCGGGCGTCATCCTCGCCACGGGGTTC
ATCCACATCCTCCCCGACGCGTTCGACAACCTCACCGACGACTGCCTCCCCGCCGGCGGG
CCGTGGAAGGAGTTCCCCTTCGCCGGCTTCGGCGCCATGGTCGGCGCCATCGGCACGCTC
GTCGTCGACACCCTCGCCACCGGCTACTTCACGCGTGCGCTGTCCAAGAAGGACGCCGCC
ACCGCCGCCGCCCACGAGGGACAGGTGCACGTGCACACCCACGCGACGCACGGCCACGCG
CACGGCTCGTCGGCGCTCGTCGCGGCCGTCGGCGAGGACGACAAGGAGACAACTCTCCGG
CATCGTGTCATCTCTCAGGTTCTAGAGCTAGGGATCGTGGTGCACTCGGTGATCATTGGC
ATCTCCCTCGGCGCGTCACAGAATCCGGAAACCATCAAGCCGCTGGTGGTCGCCCTCAGC
TTCCACCAAATGTTCGAGGGCATGGGACTCGGTGGCTGCATCGTGCAGGCGAAGTTCAAG
GTGAGGTCGATCGTGACGATGGTCCTCTTCTTCTGCCTGACGACGCCGGTGGGGATCGCC
GTCGGCGTGGGCATCTCGTCGGTGTACAACGAGAGCAGCCCGACGGCGCTGGTGGTGGAG
GGCATCCTCAACTCCGTCGCGGCGGGGATCCTCATCTACATGGCCCTCGTCGACCTCCTC
GCCGAGGACTTCATGAACCCCAGGGTGCAGAGCAAAGGCAAGCTCCAGCTCGGCATCAAC
CTCGCCATGCTCGCCGGCGCCGGCCTCATGTCCATGCTCGCCAAATGGGCCTAG

Peptide Sequence

PEP ID

Os07t0232800-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:7394486:7397577:1 gene:Os07g0232800 transcript:Os07t0232800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC TRANSPORTER 8 description:Similar to Zinc transporter protein ZIP1. (Os07t0232800-00)
Sequence

MRTNTTATVLLAAAVALLLATAARGDGGDGGCGKEDAAAGRDRARARGLKIAAFFSILVC
GALGCGLPSLGRHVPALRPDGDVFFLVKAFAAGVILATGFIHILPDAFDNLTDDCLPAGG
PWKEFPFAGFGAMVGAIGTLVVDTLATGYFTRALSKKDAATAAAHEGQVHVHTHATHGHA
HGSSALVAAVGEDDKETTLRHRVISQVLELGIVVHSVIIGISLGASQNPETIKPLVVALS
FHQMFEGMGLGGCIVQAKFKVRSIVTMVLFFCLTTPVGIAVGVGISSVYNESSPTALVVE
GILNSVAAGILIYMALVDLLAEDFMNPRVQSKGKLQLGINLAMLAGAGLMSMLAKWA

Transcript Sequence

Transcript ID

Os07t0232800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:7394486:7397577:1 gene:Os07g0232800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC TRANSPORTER 8 description:Similar to Zinc transporter protein ZIP1. (Os07t0232800-00)
Sequence

CGCGAATCCGCGATAGCAGCAGGAGCAGAAGAGCGGCCATGAGGACGAACACCACCGCCA
CCGTGCTCCTCGCCGCGGCCGTGGCGCTGCTGCTCGCCACGGCGGCGCGCGGCGACGGCG
GCGACGGCGGGTGCGGGAAGGAGGATGCGGCGGCGGGGCGGGACCGGGCGCGGGCGAGGG
GGCTCAAGATCGCGGCCTTCTTCTCCATCCTGGTGTGCGGCGCGCTGGGGTGCGGCCTCC
CCTCGCTGGGGCGCCACGTCCCTGCGCTGCGCCCCGACGGCGACGTGTTCTTCCTCGTCA
AGGCGTTCGCGGCGGGCGTCATCCTCGCCACGGGGTTCATCCACATCCTCCCCGACGCGT
TCGACAACCTCACCGACGACTGCCTCCCCGCCGGCGGGCCGTGGAAGGAGTTCCCCTTCG
CCGGCTTCGGCGCCATGGTCGGCGCCATCGGCACGCTCGTCGTCGACACCCTCGCCACCG
GCTACTTCACGCGTGCGCTGTCCAAGAAGGACGCCGCCACCGCCGCCGCCCACGAGGGAC
AGGTGCACGTGCACACCCACGCGACGCACGGCCACGCGCACGGCTCGTCGGCGCTCGTCG
CGGCCGTCGGCGAGGACGACAAGGAGACAACTCTCCGGCATCGTGTCATCTCTCAGGTTC
TAGAGCTAGGGATCGTGGTGCACTCGGTGATCATTGGCATCTCCCTCGGCGCGTCACAGA
ATCCGGAAACCATCAAGCCGCTGGTGGTCGCCCTCAGCTTCCACCAAATGTTCGAGGGCA
TGGGACTCGGTGGCTGCATCGTGCAGGCGAAGTTCAAGGTGAGGTCGATCGTGACGATGG
TCCTCTTCTTCTGCCTGACGACGCCGGTGGGGATCGCCGTCGGCGTGGGCATCTCGTCGG
TGTACAACGAGAGCAGCCCGACGGCGCTGGTGGTGGAGGGCATCCTCAACTCCGTCGCGG
CGGGGATCCTCATCTACATGGCCCTCGTCGACCTCCTCGCCGAGGACTTCATGAACCCCA
GGGTGCAGAGCAAAGGCAAGCTCCAGCTCGGCATCAACCTCGCCATGCTCGCCGGCGCCG
GCCTCATGTCCATGCTCGCCAAATGGGCCTAGACAAGCGTCACTCAGGGACTAATGTAGA
GGAAATTAAATTATAGGTCGAGAAGAAAAAATGGAAGTGAATGTACTCGCCGTCGCAATT
TTGTAGTATTTGTAGCATTCTAATTGAACTTATATATTGTTAAT