Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0231500-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:7313552:7314685:1 gene:Os07g0231500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclin-related 2 domain containing protein. (Os07t0231500-01)
Sequence

ATGGCCGCCGCCGCCACCACCACCGTGGAGGTCTCGGACGACGGCGACCACCCCGTCCTC
CGCGACGACGAGCGGGGGATCCCTCGATCCCTCTCCCTCCTCGCCGCGATCGTGGAGGCC
GACGCCGCCCGCCACGCCGCCGCCGCCACACGGCCCGCCGAGTCCGACCTCGTCCGCGCC
TTCCGCGGCGGCGCGACGCCCACCGTCGCGATCGGGGAGTTCCTGGAGCGGATCCACGCC
TTCGTCCGGCTGGAGAGCGTCCGCCACGACATCCGGCTCCAGGCCACGTGCTACGTCCTC
GCCGGGATCTACCTCACCCGGTTCTTGGGGAGCGCCGCCGCGGTGGAGGCCGGGATCCGC
GTCGACCCGTCCACGGCGCACCGCCTCGTCGCCGCAGCGGTCTTCGTGGGCGCCAAGTTC
GGGAACACCAGCGACATGCTCCCGACGAGGTGGACCTCCGTGTTCGAGACGAGCTCCGAC
GCGGCGATCCACGCGGGGGAGATGGCCGGGCTCGAGCGGCGCTTCCTGCGCGCCGTGGAC
TACCGCCTGTTCGTCCGCAGCGACAGGTTCGGGTGGTTCTGCGGCGCCATGGAGCAGGCG
CTGCATCGGAGCGTGAGCCGCAGCAGGAAGAGGACGGCGGCGGAAGCAGTGGGGGGAGAA
GAAGGGGAGGACGAGCGCCGCCGCCGCCGCCGCCACAGCATCGTCGGGGCTTTCCTGCCG
CCGCTCCCAGCCGTCGCCGCCAATTAG

Peptide Sequence

PEP ID

Os07t0231500-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:7313552:7314685:1 gene:Os07g0231500 transcript:Os07t0231500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclin-related 2 domain containing protein. (Os07t0231500-01)
Sequence

MAAAATTTVEVSDDGDHPVLRDDERGIPRSLSLLAAIVEADAARHAAAATRPAESDLVRA
FRGGATPTVAIGEFLERIHAFVRLESVRHDIRLQATCYVLAGIYLTRFLGSAAAVEAGIR
VDPSTAHRLVAAAVFVGAKFGNTSDMLPTRWTSVFETSSDAAIHAGEMAGLERRFLRAVD
YRLFVRSDRFGWFCGAMEQALHRSVSRSRKRTAAEAVGGEEGEDERRRRRRHSIVGAFLP
PLPAVAAN

Transcript Sequence

Transcript ID

Os07t0231500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:7313552:7314685:1 gene:Os07g0231500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclin-related 2 domain containing protein. (Os07t0231500-01)
Sequence

ACGCCTCTCCTAATCCCCCTCTCTCCCTCGAAACCCTAATCCCCCTCTTGCGATTTTCGC
GAAACCCTAATCCCCCTCTCGCGATTCGCGATTCCCTCTCCCTCCGCCATGGCCGCCGCC
GCCACCACCACCGTGGAGGTCTCGGACGACGGCGACCACCCCGTCCTCCGCGACGACGAG
CGGGGGATCCCTCGATCCCTCTCCCTCCTCGCCGCGATCGTGGAGGCCGACGCCGCCCGC
CACGCCGCCGCCGCCACACGGCCCGCCGAGTCCGACCTCGTCCGCGCCTTCCGCGGCGGC
GCGACGCCCACCGTCGCGATCGGGGAGTTCCTGGAGCGGATCCACGCCTTCGTCCGGCTG
GAGAGCGTCCGCCACGACATCCGGCTCCAGGCCACGTGCTACGTCCTCGCCGGGATCTAC
CTCACCCGGTTCTTGGGGAGCGCCGCCGCGGTGGAGGCCGGGATCCGCGTCGACCCGTCC
ACGGCGCACCGCCTCGTCGCCGCAGCGGTCTTCGTGGGCGCCAAGTTCGGGAACACCAGC
GACATGCTCCCGACGAGGTGGACCTCCGTGTTCGAGACGAGCTCCGACGCGGCGATCCAC
GCGGGGGAGATGGCCGGGCTCGAGCGGCGCTTCCTGCGCGCCGTGGACTACCGCCTGTTC
GTCCGCAGCGACAGGTTCGGGTGGTTCTGCGGCGCCATGGAGCAGGCGCTGCATCGGAGC
GTGAGCCGCAGCAGGAAGAGGACGGCGGCGGAAGCAGTGGGGGGAGAAGAAGGGGAGGAC
GAGCGCCGCCGCCGCCGCCGCCACAGCATCGTCGGGGCTTTCCTGCCGCCGCTCCCAGCC
GTCGCCGCCAATTAGGTTCACCATTTCTGAATTCAGCTTCAAATATTTTACTACAGATTG
TATTTTCTTTTGCTGCTTCTTGTGTTTAGAGTTGTTTGCAGGTCATCGGGGTGGAGAAGA
CGACGGACGGCCGGCCGGAGTTGGAGTTGGATCGGCTAGAGCTCGCCGCCGTTGGCCGGA
GTAGTTTTACAGAGTTTTAGCCATAGGATGTTTATAATTATATATATTGAGCAACTGTTA
GCTTTGTCAGAGTTTAACTGTCAGATTATATCGATCAATCAGTAATAGATTTCC