Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0229700-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:7224593:7228243:-1 gene:Os07g0229700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Transcription Elongation Factor II-S description:Similar to DNA-directed RNA polymerase I subunit 12 (EC 2.7.7.6) (Nuclear RNA polymerase I small specific subunit Rpa12) (Zinc ribbon domain containing protein 1). (Os07t0229700-01)
Sequence	ATGGGCGCGGCGGGGGCGATGGAGAGGGAGCTCCTGGAGGCGTTCGAGGCGGCGAGGAAG GCGGCGGACGCGGTCGGGGAGGCGGCGGCGGCGGCCGGGGCCGGGGAAGGGGAGTCGCCG GAGGCCGCGCGCTGCGTCGACGCGCTGCGGAGGCTGCGCGGGGCTCGCGTCACCACCGCC GCCCTCGTCTCCACTCAGATCGGCAGACGTATTCGCTATCTCACCAAGCATCCTCACTCA AGCATAAAAGCAACAGCTTCAGACCTGTTAGGACACTGGAAAAAGGTTGTCATTGAAGAA GACAAGAAAAATGGGGCACTGCAGAATGGAAAATCGAGTTCTACTGTGGTAAAGGTTGAG AAGGTGGAGCCTATGAAAGTTGAAAAGGCATCACCAAGGGCTACTGTCAATAATAATAAT ATGGATACCAGAGTTGTGAACCACAAAGGTGGAAAGGTTGAGAAGTTTTCTAATGCTGAG CTGAGAACCCAATCTATCAAGGTTGAGAAAGTACAAAAGGTAGTTCACAAAGTATCTTCT GTTGAGAAGCCGTCTCCTGTCCAAGGTGGTCCTCCAAGACTGACATCCGTTGTTAAATGT GGTGATGCTAGTCGAGACAGAATTCGGGCGATACTTGGTGATGCCTTCTCCAGAGTTTCT GAAGAGACTAGAAAGGATGACAGGGAGGAAGTGAGGAACATCATAGAAGAAGTAAAAGCA TGTGACCCATTCAGGATTGCTGTGATGGTAGAGTGTGCCTTGTTTCAGAAGCTGGGGAAT TTTAATGGACCTAATAAGCAAAGGTACAGATCATTGATGTTCAATCTGAAGGATGATCAC AACACAGACTTCCGGAGAAGGGTTCTTCTAGGACAAGTGCAGCCTGAGAGAATTGCTGAC CTAACCCCGACAGAAATGGCTAGCGACACCAGGAAGCTTGAGAACAAGAAGATCGAGGAG AAGGCTCTGTTCGAGTGCGAGCGTGGAGGAGCACCGAAGGCCACCACTGATCAGTTCAAG TGTGGCAGGTGCGGCCAGCGCAAGACTACCTACTACCAGCTCCAGACTCGGAGCGCCGAC GAGCCGATGACGACGTTCGTGACCTGCGTGAACTGCAACAATCACTGGAAGTTCTGCTAA

Peptide Sequence

PEP ID	Os07t0229700-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:7224593:7228243:-1 gene:Os07g0229700 transcript:Os07t0229700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Transcription Elongation Factor II-S description:Similar to DNA-directed RNA polymerase I subunit 12 (EC 2.7.7.6) (Nuclear RNA polymerase I small specific subunit Rpa12) (Zinc ribbon domain containing protein 1). (Os07t0229700-01)
Sequence	MGAAGAMERELLEAFEAARKAADAVGEAAAAAGAGEGESPEAARCVDALRRLRGARVTTA ALVSTQIGRRIRYLTKHPHSSIKATASDLLGHWKKVVIEEDKKNGALQNGKSSSTVVKVE KVEPMKVEKASPRATVNNNNMDTRVVNHKGGKVEKFSNAELRTQSIKVEKVQKVVHKVSS VEKPSPVQGGPPRLTSVVKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVKA CDPFRIAVMVECALFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIAD LTPTEMASDTRKLENKKIEEKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSAD EPMTTFVTCVNCNNHWKFC

Transcript Sequence

Transcript ID	Os07t0229700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:7224593:7228243:-1 gene:Os07g0229700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Transcription Elongation Factor II-S description:Similar to DNA-directed RNA polymerase I subunit 12 (EC 2.7.7.6) (Nuclear RNA polymerase I small specific subunit Rpa12) (Zinc ribbon domain containing protein 1). (Os07t0229700-01)
Sequence	TCTTCCTCCTCCTCGAGGCTCGAGCTGCCACCGCCATTGGAGCGCCACGCCACGACACGC GCCACCGCCGCAGAGGAGAGAGAGAGAAAATCCGGAGGCAGGCGGCTTGGTGTGGGTTGA TGGGCGCGGCGGGGGCGATGGAGAGGGAGCTCCTGGAGGCGTTCGAGGCGGCGAGGAAGG CGGCGGACGCGGTCGGGGAGGCGGCGGCGGCGGCCGGGGCCGGGGAAGGGGAGTCGCCGG AGGCCGCGCGCTGCGTCGACGCGCTGCGGAGGCTGCGCGGGGCTCGCGTCACCACCGCCG CCCTCGTCTCCACTCAGATCGGCAGACGTATTCGCTATCTCACCAAGCATCCTCACTCAA GCATAAAAGCAACAGCTTCAGACCTGTTAGGACACTGGAAAAAGGTTGTCATTGAAGAAG ACAAGAAAAATGGGGCACTGCAGAATGGAAAATCGAGTTCTACTGTGGTAAAGGTTGAGA AGGTGGAGCCTATGAAAGTTGAAAAGGCATCACCAAGGGCTACTGTCAATAATAATAATA TGGATACCAGAGTTGTGAACCACAAAGGTGGAAAGGTTGAGAAGTTTTCTAATGCTGAGC TGAGAACCCAATCTATCAAGGTTGAGAAAGTACAAAAGGTAGTTCACAAAGTATCTTCTG TTGAGAAGCCGTCTCCTGTCCAAGGTGGTCCTCCAAGACTGACATCCGTTGTTAAATGTG GTGATGCTAGTCGAGACAGAATTCGGGCGATACTTGGTGATGCCTTCTCCAGAGTTTCTG AAGAGACTAGAAAGGATGACAGGGAGGAAGTGAGGAACATCATAGAAGAAGTAAAAGCAT GTGACCCATTCAGGATTGCTGTGATGGTAGAGTGTGCCTTGTTTCAGAAGCTGGGGAATT TTAATGGACCTAATAAGCAAAGGTACAGATCATTGATGTTCAATCTGAAGGATGATCACA ACACAGACTTCCGGAGAAGGGTTCTTCTAGGACAAGTGCAGCCTGAGAGAATTGCTGACC TAACCCCGACAGAAATGGCTAGCGACACCAGGAAGCTTGAGAACAAGAAGATCGAGGAGA AGGCTCTGTTCGAGTGCGAGCGTGGAGGAGCACCGAAGGCCACCACTGATCAGTTCAAGT GTGGCAGGTGCGGCCAGCGCAAGACTACCTACTACCAGCTCCAGACTCGGAGCGCCGACG AGCCGATGACGACGTTCGTGACCTGCGTGAACTGCAACAATCACTGGAAGTTCTGCTAAG CTAGGCACATCCTACTGAGAAGTGTTAGTGTAGTTGACCCTGGAGTTTGACAGGCAGGTT AGTTTCGGGCCCTGCTTATCTGGGCCCGTTTCATCTTTTTTCCCCTTAAGTTAGCTTGTT CCGAATTCGATTTGTTCTAGTGCCATTTGACTGCATAATGGCCGGCCGTTGGGCTTGCAT TGTCAGGCTACTGCTGTTGTACTTATCAGTCTTGTTTATTGTACCATTGGATGCAATAAT GCCATAATGGTCATGCTCATGAGCTG