Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0223700-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:6841477:6844677:1 gene:Os07g0223700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os07t0223700-00)
Sequence

ATGCGCTCCTGCTGCTGCTGCTGCCCCTGCCCGGCGGCGCTCGGGATCGGGATCGGGCCG
CGGCTGCGCTCCTTCCTCCGCGACTACGACGCGCTCCAGTCGCTCGCCCTCGCCCTCATC
TACCTCCAGATTGGTTGTGCGCTGATTGGGTCACTTGGAGCATTGTTCAATGGCGTTCTT
GTGATCAACCTGGTAATTGGGCTCTTTGCTGTTGTTGCAATTGAGAGTAGCAGCCAGACA
CTTGGTCGGACATATGCAGTCCTTCTGTTCTTCGCTATTGTTCTTGATGTTGCTTGGTTT
ATTCTCTTCTCACATGCTATATGGAATATTACTCCTGAAGAGAAGTATGGTCAACTTTTC
GTTTTATCACTCAAACTAGCGTTGTGGATGCAAATTATTGGGTTTTCAGTAAGGTTTTTG
TCTTCCTTCATATGGATCCAGATGTATAGGCTGGGGGTTTCATCAAGCACCCCAACATAT
CATGAAGTAAACTATGATGGAAGAAATAGTTTCTTGAGCCCAAGATCAAGTTCAGTTAGA
CGAAATTCCATGGCTGATGATATATTGGGTGGTTCTATTTATGATCCTGCCTACTATTCT
TCTCTTTTCGCGGATGTCCGAAACAACACATGCACTCATCAGGGTGATAAACAAAGTGGT
AGTAATGATAGTGGATCAACATCTGCGGGTCAATCTCCACGACTTAAATCTTTTGCCAGT
AGATCTTTTGTGGCCAATGATGTAAGTCTATGTCTGATTTTTAATCATAATGTAATTAAC
ACATTCTTAGACTTCTACAATCCCATCATTTATGTCGAAAACCCTGGCTTTCTAATGTCC
TTAGGAAGAACATTTTCTGTCTCATTTAAGTTGGGTTTGATTCTGCAAATTGATGAAGGT
TCTACATGTCTTAAATACAATTTATCATGA

Peptide Sequence

PEP ID

Os07t0223700-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:6841477:6844677:1 gene:Os07g0223700 transcript:Os07t0223700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os07t0223700-00)
Sequence

MRSCCCCCPCPAALGIGIGPRLRSFLRDYDALQSLALALIYLQIGCALIGSLGALFNGVL
VINLVIGLFAVVAIESSSQTLGRTYAVLLFFAIVLDVAWFILFSHAIWNITPEEKYGQLF
VLSLKLALWMQIIGFSVRFLSSFIWIQMYRLGVSSSTPTYHEVNYDGRNSFLSPRSSSVR
RNSMADDILGGSIYDPAYYSSLFADVRNNTCTHQGDKQSGSNDSGSTSAGQSPRLKSFAS
RSFVANDVSLCLIFNHNVINTFLDFYNPIIYVENPGFLMSLGRTFSVSFKLGLILQIDEG
STCLKYNLS

Transcript Sequence

Transcript ID

Os07t0223700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:6841477:6844677:1 gene:Os07g0223700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os07t0223700-00)
Sequence

CCGGGCTCGGCGTGGTGCCGGGATGCGCTCCTGCTGCTGCTGCTGCCCCTGCCCGGCGGC
GCTCGGGATCGGGATCGGGCCGCGGCTGCGCTCCTTCCTCCGCGACTACGACGCGCTCCA
GTCGCTCGCCCTCGCCCTCATCTACCTCCAGATTGGTTGTGCGCTGATTGGGTCACTTGG
AGCATTGTTCAATGGCGTTCTTGTGATCAACCTGGTAATTGGGCTCTTTGCTGTTGTTGC
AATTGAGAGTAGCAGCCAGACACTTGGTCGGACATATGCAGTCCTTCTGTTCTTCGCTAT
TGTTCTTGATGTTGCTTGGTTTATTCTCTTCTCACATGCTATATGGAATATTACTCCTGA
AGAGAAGTATGGTCAACTTTTCGTTTTATCACTCAAACTAGCGTTGTGGATGCAAATTAT
TGGGTTTTCAGTAAGGTTTTTGTCTTCCTTCATATGGATCCAGATGTATAGGCTGGGGGT
TTCATCAAGCACCCCAACATATCATGAAGTAAACTATGATGGAAGAAATAGTTTCTTGAG
CCCAAGATCAAGTTCAGTTAGACGAAATTCCATGGCTGATGATATATTGGGTGGTTCTAT
TTATGATCCTGCCTACTATTCTTCTCTTTTCGCGGATGTCCGAAACAACACATGCACTCA
TCAGGGTGATAAACAAAGTGGTAGTAATGATAGTGGATCAACATCTGCGGGTCAATCTCC
ACGACTTAAATCTTTTGCCAGTAGATCTTTTGTGGCCAATGATGTAAGTCTATGTCTGAT
TTTTAATCATAATGTAATTAACACATTCTTAGACTTCTACAATCCCATCATTTATGTCGA
AAACCCTGGCTTTCTAATGTCCTTAGGAAGAACATTTTCTGTCTCATTTAAGTTGGGTTT
GATTCTGCAAATTGATGAAGGTTCTACATGTCTTAAATACAATTTATCATGA