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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0220000-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:6620316:6620931:-1 gene:Os07g0220000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pro13b.4 description:Similar to Prolamin. (Os07t0220000-01)
Sequence

ATGAAGATCATTTTCGTCTTTGCTCTCCTTGCTATTGCTGCATGCAGCGCCACTGCGCAG
TTTGATGTTTTAGGTCAAAATATTAGGCAATATCAGGTGCAGTCGCCTCTCCTGCTACAG
CAACAGGTGCTTAGCCTATATAATGAGTTCGTAAGGCAGCAGTATAGCATTGCGGCAAGC
CCCTTCTTGCAATCAGCTGTGTTTCAAGTGAGAAACAACCAAGTCTTGCAACAGCTCAGG
CTGGTGGCGCAACAATCTCACTACCAGGACATTAACGTTGTCCAGGCCATAGCGCAGCAG
CTACACCTACAGCAGTTTGGCGATCTCTACATTGACCGGAATCTGGCTCAAGCTCAAGCA
CTGTTGGCTTTTAACTTGCCATCTACATATGGTATCTACCCTAGGTACTATAGTGCACCC
GGTAGCATTACCACCCTTGGCGGTGTCTTGTACTGA

Peptide Sequence

PEP ID

Os07t0220000-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:6620316:6620931:-1 gene:Os07g0220000 transcript:Os07t0220000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pro13b.4 description:Similar to Prolamin. (Os07t0220000-01)
Sequence

MKIIFVFALLAIAACSATAQFDVLGQNIRQYQVQSPLLLQQQVLSLYNEFVRQQYSIAAS
PFLQSAVFQVRNNQVLQQLRLVAQQSHYQDINVVQAIAQQLHLQQFGDLYIDRNLAQAQA
LLAFNLPSTYGIYPRYYSAPGSITTLGGVLY

Transcript Sequence

Transcript ID

Os07t0220000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:6620316:6620931:-1 gene:Os07g0220000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pro13b.4 description:Similar to Prolamin. (Os07t0220000-01)
Sequence

ATCGCTCGCACAATTCAAGCATTATACAACAAAAATTTAAAAGAACTAGTGTCCTGCAAC
AATGAAGATCATTTTCGTCTTTGCTCTCCTTGCTATTGCTGCATGCAGCGCCACTGCGCA
GTTTGATGTTTTAGGTCAAAATATTAGGCAATATCAGGTGCAGTCGCCTCTCCTGCTACA
GCAACAGGTGCTTAGCCTATATAATGAGTTCGTAAGGCAGCAGTATAGCATTGCGGCAAG
CCCCTTCTTGCAATCAGCTGTGTTTCAAGTGAGAAACAACCAAGTCTTGCAACAGCTCAG
GCTGGTGGCGCAACAATCTCACTACCAGGACATTAACGTTGTCCAGGCCATAGCGCAGCA
GCTACACCTACAGCAGTTTGGCGATCTCTACATTGACCGGAATCTGGCTCAAGCTCAAGC
ACTGTTGGCTTTTAACTTGCCATCTACATATGGTATCTACCCTAGGTACTATAGTGCACC
CGGTAGCATTACCACCCTTGGCGGTGTCTTGTACTGAATTTTCACAATATTGTAGTTCGG
AAGTGAAAATATAAGCTCAGGTATCATCGTATGTGACATGTGAAACTTAAGGTGATATAA
ATAGAAATAAAATTAT