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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0215500-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:6336198:6336838:-1 gene:Os07g0215500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice allergen 16, endosperm-specific gene 100 description:Allergenic protein. (Os07t0215500-01)
Sequence

ATGGCTTCCAACAAGGTAGTGTTCTCAGTGTTGCTTCTCGCCGTCGTCTCCGTGCTCGCG
GCGACGGCGACCATGGCGGAGTACCACCACCAAGACCAGGTGGTCTACACCCCGGGCCCG
CTCTGTCAGCCAGGAATGGGCTACCCGATGTACCCGCTCCCGCGTTGCCGGGCGTTGGTG
AAGCGCCAGTGCGTCGGCCGTGGCACGGCCGCCGCCGCCGAGCAGGTCCGGCGAGACTGC
TGCCGGCAGCTCGCCGCCGTCGACGACAGCTGGTGCAGGTGCGAGGCGATCAGCCACATG
CTGGGAGGCATCTACAGGGAGCTCGGCGCCCCCGATGTCGGGCACCCCATGTCCGAGGTG
TTCCGCGGCTGCCGGAGAGGGGACTTGGAGCGCGCGGCGGCGAGCCTCCCGGCGTTCTGC
AACGTGGACATCCCCAACGGCGGAGGTGGTGTCTGCTACTGGCTGGCGAGATCTGGCTAC
TAG

Peptide Sequence

PEP ID

Os07t0215500-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:6336198:6336838:-1 gene:Os07g0215500 transcript:Os07t0215500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice allergen 16, endosperm-specific gene 100 description:Allergenic protein. (Os07t0215500-01)
Sequence

MASNKVVFSVLLLAVVSVLAATATMAEYHHQDQVVYTPGPLCQPGMGYPMYPLPRCRALV
KRQCVGRGTAAAAEQVRRDCCRQLAAVDDSWCRCEAISHMLGGIYRELGAPDVGHPMSEV
FRGCRRGDLERAAASLPAFCNVDIPNGGGGVCYWLARSGY

Transcript Sequence

Transcript ID

Os07t0215500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:6336198:6336838:-1 gene:Os07g0215500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice allergen 16, endosperm-specific gene 100 description:Allergenic protein. (Os07t0215500-01)
Sequence

ATAAACAAATTGATAGTTAAGATTTTCTGCAACAAAAATATGGCTTCCAACAAGGTAGTG
TTCTCAGTGTTGCTTCTCGCCGTCGTCTCCGTGCTCGCGGCGACGGCGACCATGGCGGAG
TACCACCACCAAGACCAGGTGGTCTACACCCCGGGCCCGCTCTGTCAGCCAGGAATGGGC
TACCCGATGTACCCGCTCCCGCGTTGCCGGGCGTTGGTGAAGCGCCAGTGCGTCGGCCGT
GGCACGGCCGCCGCCGCCGAGCAGGTCCGGCGAGACTGCTGCCGGCAGCTCGCCGCCGTC
GACGACAGCTGGTGCAGGTGCGAGGCGATCAGCCACATGCTGGGAGGCATCTACAGGGAG
CTCGGCGCCCCCGATGTCGGGCACCCCATGTCCGAGGTGTTCCGCGGCTGCCGGAGAGGG
GACTTGGAGCGCGCGGCGGCGAGCCTCCCGGCGTTCTGCAACGTGGACATCCCCAACGGC
GGAGGTGGTGTCTGCTACTGGCTGGCGAGATCTGGCTACTAGCTAGGCTACTGTAGCTAG
CTGTGCATGTATGTGGTGTGGTTACTAAAATAATTAGTGTTTTCCTTTTGTTTGGAAGCA
TATGTGTGGTGAATAAATGATGAACTCCGATGTTCCTCTCT