Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0213400-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:6232648:6234546:1 gene:Os07g0213400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os07t0213400-01)
Sequence

ATGTCCCAAGTTGGATCCGCCCCTGAGACGATGGATCTGGAGACGGAGAATCGTCTTGCT
TCTTTACTTCTCGAGGAGGCGAGGAGGTTGCAGGCGGAGGCTGACAGGGAAGGTGTTCAC
GCATATCTGCGAAAGCCCAATGTAAGGCACCGTCCGAATTCGCGCTTCCTTACGGCCACA
GTTCGTGGAGTTCAGCAAGCGAACCGTGTTGTGGAGGTCAATGAAATGTGGCGTGCCAGA
GAGAAGGAACTTGAACTGGAGTCTAAGATGAAAAGGAGTAGAGGTCTTGGTGACGCCAGA
GGTGAAAAACGCAAAAGTGACTTGAGAAACCAGAGTTCCAGTCCAAGGGTTGAAGAAGAA
GGCATAGCTTATAACAGTTCATATTCGGATCAGGAGGATGGTCTAGGGGACGATGACATT
GAGAAGTTTCTTCATTCGAGGGTGAAGCGAGGTCGAGGGGCCGTTGGTTCTAGGATGGAT
GAGCCTGGTCCATACCTTAATGTTGCATCTCGTAGTCAAGAGAACGAACCTAATGCTGAT
ACTCAGGTGGAAGAAAAATGGGAACGAAGAGTACAAGGCCCGGAGAAACCAGTGTCTTTG
AGATCAAGATCACCTGATGACTATTGGCGTAGGGAAGCACTAGATGGAGAACCTTCCAGC
CCTGAACTCCACAAGAAAAAAGAGAAGAAGAAGGAAAAGAGTTCAGAGAAAAAGGACAGG
AAAGAGAGAAGGAAGAAAAAAGACAAGAAGAAATCTAAGCATCGCCACCACCACCATCAC
AAAAGTCGGCAAAGGGAGTGA

Peptide Sequence

PEP ID

Os07t0213400-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:6232648:6234546:1 gene:Os07g0213400 transcript:Os07t0213400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os07t0213400-01)
Sequence

MSQVGSAPETMDLETENRLASLLLEEARRLQAEADREGVHAYLRKPNVRHRPNSRFLTAT
VRGVQQANRVVEVNEMWRAREKELELESKMKRSRGLGDARGEKRKSDLRNQSSSPRVEEE
GIAYNSSYSDQEDGLGDDDIEKFLHSRVKRGRGAVGSRMDEPGPYLNVASRSQENEPNAD
TQVEEKWERRVQGPEKPVSLRSRSPDDYWRREALDGEPSSPELHKKKEKKKEKSSEKKDR
KERRKKKDKKKSKHRHHHHHKSRQRE

Transcript Sequence

Transcript ID

Os07t0213400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:6232648:6234546:1 gene:Os07g0213400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os07t0213400-01)
Sequence

GTCTCCTCCGCTCCTTGCGACAAGAACAGGGGGAGGGAGAGGCGCCGATCCCCATCTGCT
CGAGCAAAGCAGCGGAGGGGAGGGGATCCTGCAGATCTGGAAGAAGCTCATCTCTTAATT
TCAGAGAGAGCCTCAACCTTTTGATACAAGAGTAACAGTATTGGGGGTTCATCTGAACCC
CCAAATGTCCCAAGTTGGATCCGCCCCTGAGACGATGGATCTGGAGACGGAGAATCGTCT
TGCTTCTTTACTTCTCGAGGAGGCGAGGAGGTTGCAGGCGGAGGCTGACAGGGAAGGTGT
TCACGCATATCTGCGAAAGCCCAATGTAAGGCACCGTCCGAATTCGCGCTTCCTTACGGC
CACAGTTCGTGGAGTTCAGCAAGCGAACCGTGTTGTGGAGGTCAATGAAATGTGGCGTGC
CAGAGAGAAGGAACTTGAACTGGAGTCTAAGATGAAAAGGAGTAGAGGTCTTGGTGACGC
CAGAGGTGAAAAACGCAAAAGTGACTTGAGAAACCAGAGTTCCAGTCCAAGGGTTGAAGA
AGAAGGCATAGCTTATAACAGTTCATATTCGGATCAGGAGGATGGTCTAGGGGACGATGA
CATTGAGAAGTTTCTTCATTCGAGGGTGAAGCGAGGTCGAGGGGCCGTTGGTTCTAGGAT
GGATGAGCCTGGTCCATACCTTAATGTTGCATCTCGTAGTCAAGAGAACGAACCTAATGC
TGATACTCAGGTGGAAGAAAAATGGGAACGAAGAGTACAAGGCCCGGAGAAACCAGTGTC
TTTGAGATCAAGATCACCTGATGACTATTGGCGTAGGGAAGCACTAGATGGAGAACCTTC
CAGCCCTGAACTCCACAAGAAAAAAGAGAAGAAGAAGGAAAAGAGTTCAGAGAAAAAGGA
CAGGAAAGAGAGAAGGAAGAAAAAAGACAAGAAGAAATCTAAGCATCGCCACCACCACCA
TCACAAAAGTCGGCAAAGGGAGTGATTGTTCTGCTTGCTGAGCATAAAAAATGTACACAA
GAAACATGTTAGCTTCTAATTGCTACTGTTACTTCTCACTTGAAACATGTTGTACCAAAA
ACTTGATATCGTGTGGAATGGAGAACTGTTCTTCTCACACGGAGTGTTGATACAAAGCCA
TATGTTAGATTTTAGTGCTCTCGTTGGTCTTGTGTATTTATTATCATGATGACTAAATCA
CACCCTCGTTAATTAGGAATAACGTGGTTTTGGTAGCTAAATGTTACAGCTTCCAATCTT