Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0212400-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:6146970:6152549:-1 gene:Os07g0212400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transposase, Ptta/En/Spm, plant domain containing protein. (Os07t0212400-01)
Sequence	ATGGCAAGGAGTAGAAAAAGGCGTATTGTTCAGAGCAATGAGGAATATTTGTCAGAGGAA CAGACTGAAGAAGAAAATACCCTTCCACAGCTTGCCACACCATCTGAACAAAAAACTGTA TGTGATGATTCTGGAGAAGGCAATGAAGACACTGATGACGATTTTAATATCAATGATGGA GAAGGCAATGAAGACACTAATGACGATGTTGATATTGATGATGAAGGCAATGAAGATACT GATGTTGATATTAATGTTCGAGTTGAAAATGGAGCACCTGAAACACGTGGCAAGACAAAA CTGAAAGATGTTTGGAACCTTCCGAAAGGGCTTAGAATTGTGGTACAATGCAATGATCTC AATCAGGCGGTAGGGGAAGAAGATGGAATTTTGGGTAAATTTCTTGGAATGATATCTAGG AATGGTAGTCTGTGTAGCTTAGGCTACACAGACTGGAGATATGTAATAGGAAAGAGAGAG AAAAATACAAATGAACTAAAAGTTAAAAAGGACATACTTAAGCAAGTAAAGATGAGATTC CTTTATGCTCCTCGGATGGAAGAGTTCATATTAAAAAAAATTGGAGAAAGATGGCGGCAA TATAAAGCAAAACTAAAAGATTTGTATTTTGATGTGAATGAGACTAAGGAAGCTAATTGC AACAATGTCCCAGAAGGTGTGCTTTCTGACCAGTGGATTGCTCTTGTCAATCATTGGATG AACGAGAAATCGAAGAGAATAAGTGAGCAGAATAAGAAAAACTGCCAAAAGAAGAAGGCA ATTCACACAGCAGGGACAAAGAGTTTTGCTCGCACAAGAGAAGAGATGAGACAAAAAGAT CCTGCAAAGAAGAACCCACATAGAGCTGTTGTTTATGTCCACACACACAAGCGCAAAAGT GACAAGAATATAAATGGGCATGTGGATAATTTGAAGAGACTTATAGCTGAACAACCAGCT TTAGCGGATGCTAGTAAAGGAAAGACTGCTTGGAAAGGAGATGCATTGAACCAAATACTA GGAGATGACAAGCCTGGGCGTGTGCATGGTCTTGGACTAGTTCCAAAGCCTAAACAAGTG CTTGATGTGCCAACTTCCCGACGTTTGCAGAATATAAATCTTACTACAGTGGAGGATAAC TCCAGTGAAGATGTAATGGCTATTAGACTGCAGATGGAAAAGTTAGAACGCCATGTTGAG AATAATGATGCTGAACTTTTACAATTAAAAGAGAAGGCAACCAAGTTGGAAAAGGCACAA AAGAATCAGGGAGGTTTAGATGGAGCATCTACAAATAAAAAAGCTATTTGTGATGACGTA CCTAATTCAAAAAGGAGGAGAGTGTATGGTGACAACCCCTCGCAAGAAATTTGTATGTTT GAGGAGGGAAACATTATGGATCAGCAGGACAACAGTTTGATGAATACACAAAGCCATGTG CACGATGAGAATTTGCAACCACCAACCAAGCATTCTACTGTTTACAAGCGCAAAGGAAAT TTGGACCATAATGAGCTTATGCAACCAGGGAAGAGTATTTCTAGTGCATACAAGAACAAT AAACCTGACAACCAGGACAACTATATGGTGAATGCACACAAAGTTACAAGTACACACAAG AACAAAGAGAACCTTACCCGCAAGCTTGTTAGACCAAGCCTAAACAAGTATAGTACTGCT TCTAAGAAACGGCAATGCAACACAATAGACTTTTTAACTGACAATTCAACAGTGAAAGTG TATGGTGACGGTCCCTTGCAAGAAATTTGTCATGTTGAACAGGAAAACATTGTGATGAAT TCACAAAGCCATGCTCAAGATGAGGATAAGACACCACCAACCAAGCATGCTACTGCACAC AAGAACAAACGAACCTTTGGCCTAAATGACCATGGGAAACAGATGGAGATTATTTGTGCC AAGAACAAGAAACCTGACAATCAGGACAGCCATATGGTACATGCACATAAAGTTGGTGGT GCATACAAGAAACAACAGTGCAGCAAAATGGACTTTATCACTGACAATTCAATGGAGGTT GACAAGATAAATGGGTGA

Peptide Sequence

PEP ID	Os07t0212400-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:6146970:6152549:-1 gene:Os07g0212400 transcript:Os07t0212400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transposase, Ptta/En/Spm, plant domain containing protein. (Os07t0212400-01)
Sequence	MARSRKRRIVQSNEEYLSEEQTEEENTLPQLATPSEQKTVCDDSGEGNEDTDDDFNINDG EGNEDTNDDVDIDDEGNEDTDVDINVRVENGAPETRGKTKLKDVWNLPKGLRIVVQCNDL NQAVGEEDGILGKFLGMISRNGSLCSLGYTDWRYVIGKREKNTNELKVKKDILKQVKMRF LYAPRMEEFILKKIGERWRQYKAKLKDLYFDVNETKEANCNNVPEGVLSDQWIALVNHWM NEKSKRISEQNKKNCQKKKAIHTAGTKSFARTREEMRQKDPAKKNPHRAVVYVHTHKRKS DKNINGHVDNLKRLIAEQPALADASKGKTAWKGDALNQILGDDKPGRVHGLGLVPKPKQV LDVPTSRRLQNINLTTVEDNSSEDVMAIRLQMEKLERHVENNDAELLQLKEKATKLEKAQ KNQGGLDGASTNKKAICDDVPNSKRRRVYGDNPSQEICMFEEGNIMDQQDNSLMNTQSHV HDENLQPPTKHSTVYKRKGNLDHNELMQPGKSISSAYKNNKPDNQDNYMVNAHKVTSTHK NKENLTRKLVRPSLNKYSTASKKRQCNTIDFLTDNSTVKVYGDGPLQEICHVEQENIVMN SQSHAQDEDKTPPTKHATAHKNKRTFGLNDHGKQMEIICAKNKKPDNQDSHMVHAHKVGG AYKKQQCSKMDFITDNSMEVDKING

Transcript Sequence

Transcript ID	Os07t0212400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:6146970:6152549:-1 gene:Os07g0212400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transposase, Ptta/En/Spm, plant domain containing protein. (Os07t0212400-01)
Sequence	AAAAATCTCTTTCCTCTATCCTGACTCCCTGAGTAAATCTCTTTCCTCTGTTGTGGGATT CCCCTTTCCTACGAACTCTCCTGTCGTTCTACGGTTCTCCTCCTCGTCTTCATCGGTGTT GATCTGTAGGTAAGATGCCGGGCGCTTTACTGACCCACCGCCCCAAGCAGGCGCTCCTAG ATCTTCCACCGCTCCGCTCCGTCGGCTGCTGTACCAGCCATCACTGCTGCCGCACCTTCC TGCCGATTAACAGCCACGAGCAGGCGACCCCCATGCCCCATGGATGATGTAGGGCATGCG GCGGGCCGGAGACGCCCCCAGCCGATGTGCCGGGTGACCGGGGCACTGCAATTGATGCGG GTTATACCTCCCGACACCGGCTGTCCACTTCGCTCTGCTCCACGCTGCGCGGCTGGCGGC AATGTTTCCAAGCCCCGGAATCTCTGCCTCCCTCTGCACATCTTACTACCTCTCTGAGTC GCCAAATTGCAATGGAGGCTAATTCCCTTCCAGGACTACAATACTTACCAATTTGATATG TTGTATTTTCAGGTTTGGAGTCAGATGCACTGACCGTCCATAGCTGAAGGAGCCTGGTCT ACGTACAGCTAGGCTTCACACAACTATATGGCAAGGAGTAGAAAAAGGCGTATTGTTCAG AGCAATGAGGAATATTTGTCAGAGGAACAGACTGAAGAAGAAAATACCCTTCCACAGCTT GCCACACCATCTGAACAAAAAACTGTATGTGATGATTCTGGAGAAGGCAATGAAGACACT GATGACGATTTTAATATCAATGATGGAGAAGGCAATGAAGACACTAATGACGATGTTGAT ATTGATGATGAAGGCAATGAAGATACTGATGTTGATATTAATGTTCGAGTTGAAAATGGA GCACCTGAAACACGTGGCAAGACAAAACTGAAAGATGTTTGGAACCTTCCGAAAGGGCTT AGAATTGTGGTACAATGCAATGATCTCAATCAGGCGGTAGGGGAAGAAGATGGAATTTTG GGTAAATTTCTTGGAATGATATCTAGGAATGGTAGTCTGTGTAGCTTAGGCTACACAGAC TGGAGATATGTAATAGGAAAGAGAGAGAAAAATACAAATGAACTAAAAGTTAAAAAGGAC ATACTTAAGCAAGTAAAGATGAGATTCCTTTATGCTCCTCGGATGGAAGAGTTCATATTA AAAAAAATTGGAGAAAGATGGCGGCAATATAAAGCAAAACTAAAAGATTTGTATTTTGAT GTGAATGAGACTAAGGAAGCTAATTGCAACAATGTCCCAGAAGGTGTGCTTTCTGACCAG TGGATTGCTCTTGTCAATCATTGGATGAACGAGAAATCGAAGAGAATAAGTGAGCAGAAT AAGAAAAACTGCCAAAAGAAGAAGGCAATTCACACAGCAGGGACAAAGAGTTTTGCTCGC ACAAGAGAAGAGATGAGACAAAAAGATCCTGCAAAGAAGAACCCACATAGAGCTGTTGTT TATGTCCACACACACAAGCGCAAAAGTGACAAGAATATAAATGGGCATGTGGATAATTTG AAGAGACTTATAGCTGAACAACCAGCTTTAGCGGATGCTAGTAAAGGAAAGACTGCTTGG AAAGGAGATGCATTGAACCAAATACTAGGAGATGACAAGCCTGGGCGTGTGCATGGTCTT GGACTAGTTCCAAAGCCTAAACAAGTGCTTGATGTGCCAACTTCCCGACGTTTGCAGAAT ATAAATCTTACTACAGTGGAGGATAACTCCAGTGAAGATGTAATGGCTATTAGACTGCAG ATGGAAAAGTTAGAACGCCATGTTGAGAATAATGATGCTGAACTTTTACAATTAAAAGAG AAGGCAACCAAGTTGGAAAAGGCACAAAAGAATCAGGGAGGTTTAGATGGAGCATCTACA AATAAAAAAGCTATTTGTGATGACGTACCTAATTCAAAAAGGAGGAGAGTGTATGGTGAC AACCCCTCGCAAGAAATTTGTATGTTTGAGGAGGGAAACATTATGGATCAGCAGGACAAC AGTTTGATGAATACACAAAGCCATGTGCACGATGAGAATTTGCAACCACCAACCAAGCAT TCTACTGTTTACAAGCGCAAAGGAAATTTGGACCATAATGAGCTTATGCAACCAGGGAAG AGTATTTCTAGTGCATACAAGAACAATAAACCTGACAACCAGGACAACTATATGGTGAAT GCACACAAAGTTACAAGTACACACAAGAACAAAGAGAACCTTACCCGCAAGCTTGTTAGA CCAAGCCTAAACAAGTATAGTACTGCTTCTAAGAAACGGCAATGCAACACAATAGACTTT TTAACTGACAATTCAACAGTGAAAGTGTATGGTGACGGTCCCTTGCAAGAAATTTGTCAT GTTGAACAGGAAAACATTGTGATGAATTCACAAAGCCATGCTCAAGATGAGGATAAGACA CCACCAACCAAGCATGCTACTGCACACAAGAACAAACGAACCTTTGGCCTAAATGACCAT GGGAAACAGATGGAGATTATTTGTGCCAAGAACAAGAAACCTGACAATCAGGACAGCCAT ATGGTACATGCACATAAAGTTGGTGGTGCATACAAGAAACAACAGTGCAGCAAAATGGAC TTTATCACTGACAATTCAATGGAGGTTGACAAGATAAATGGGTGAAGATGTGGGGGAAAT TTTGTGACTGCTAGTACGCAACTAGGTCACCTGTACATGTCACGGAATGATGATGGCTGC AAGGTGGAGAATGGGGGCAACAAGATGTGTTTTTTTTATATACTTTAGATTCTATTTTCT GCATTAATGTTCTGAACAAAGGTTTAATGCCATGAATTATACTGATGATTGTCTATGTAA TGCAAAATACTATATTTAATATATAATCGATTATCATGATTGATTGGACT