Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0212200-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:6134016:6136740:1 gene:Os07g0212200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to MRNA-binding protein (Fragment). (Os07t0212200-01)
Sequence	ATGGCCTTCTCCTCCACCGCCGCCGCCGCCTCCACCGCCTTCGTCTCTGGGCACCGCCGA CGCGGCGGCGCGTGCCACCTGCTGTCCTCCTCTTTCCTCATCGCGTTCCCGCGCGCCGTC GCGGCGAGGAGGTGCGGCGAGGCGGCCGCGGCGCCGAGGAGGGTGGGCGCGGTGACCGTG CGCGCGCAGGCGGCGGCGGGGGCGGGGAAGAAGAGCGTGCTGATCGTGAACACGAATGGC GGCGGGCACGCCGTGATCGGGTTCTACCTCGCCAAGGACCTGCTCGCCGCGGGCCACGCC GTCACCGTGCTCACCGTCGGCGACGAGGGCTCCGACAAGATGAAGAAGCCGCCCTTCTCC CGCTTCTCGGAGCTGACGAGTGCCGGGGCGACGACGGTGTGGGGCGACCCGGCGGACGTC GGCGCGGCGGTCGGCGGCGGCGCCTCGTTCGACGTCGTCCTCGACAACAACGGCAAGGAC CTCGACGCCGTCAAGCCGGTGGTGGACTGGGCGAAGGCGGCCGGCGTGGCGCAATTCCTC TTCGTCAGCAGCGCCGGCATCTACACGCCCAGCGACGAGCCGCCGCACGTCGAGGGGGAC GCGGTGAAGGAGAGCGCGGGGCATGTGGGCGTGGAGAAGTACATCGCGGAGCAGTTCGGC AGCTGGGCGTCGTTCCGGCCGCAGTACATGATCGGCTCCGGCAACAACAAGGACTGCGAG GAGTGGTTCTTCGACAGGATTGTGAGGGGGAGGCCGGTGCCGATCCCGGGGTCGGGGATG CAGGTGACGAACATATCGCACGTGCGCGACCTGGCGAGCATGGTGGCGCTCGCCGTGGAG AGCCCCGGCGCGGCGGCGGGGAGGATCTTCAACTGCGTCTCCGACCGCGCCGTCACCTTC AACGGCCTCGTCAAGATGTGCGCCGCCGCCGCCGGCGCCCAGCCGGAGATCCTCCACTAC GACCCCGCCGCCGTCGGCGTCGACGCCAAGAAGGCCTTCCCCTTCCGCAACATGCACTTC TACGCGGAGCCGAGGGCGGCGAAGGAGGTGCTTGGATGGAGGAGCTCGACGAACCTGCCG GAGGACCTCAAGGAGAGGTTCGCGGAGTACGCCAGCAGCGGCAGAGGGCAGAAGGAGATG AGCTTCGACCTCGACGACAAGATCATCGCCGCCGCCTAA

Peptide Sequence

PEP ID	Os07t0212200-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:6134016:6136740:1 gene:Os07g0212200 transcript:Os07t0212200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to MRNA-binding protein (Fragment). (Os07t0212200-01)
Sequence	MAFSSTAAAASTAFVSGHRRRGGACHLLSSSFLIAFPRAVAARRCGEAAAAPRRVGAVTV RAQAAAGAGKKSVLIVNTNGGGHAVIGFYLAKDLLAAGHAVTVLTVGDEGSDKMKKPPFS RFSELTSAGATTVWGDPADVGAAVGGGASFDVVLDNNGKDLDAVKPVVDWAKAAGVAQFL FVSSAGIYTPSDEPPHVEGDAVKESAGHVGVEKYIAEQFGSWASFRPQYMIGSGNNKDCE EWFFDRIVRGRPVPIPGSGMQVTNISHVRDLASMVALAVESPGAAAGRIFNCVSDRAVTF NGLVKMCAAAAGAQPEILHYDPAAVGVDAKKAFPFRNMHFYAEPRAAKEVLGWRSSTNLP EDLKERFAEYASSGRGQKEMSFDLDDKIIAAA

Transcript Sequence

Transcript ID	Os07t0212200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:6134016:6136740:1 gene:Os07g0212200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to MRNA-binding protein (Fragment). (Os07t0212200-01)
Sequence	ATCCTGCGTCCCAGTGCCCACCACTCATCACCTCCCCCCTCTCATCCTCTCCTCCTCCTC CAATGGCCTTCTCCTCCACCGCCGCCGCCGCCTCCACCGCCTTCGTCTCTGGGCACCGCC GACGCGGCGGCGCGTGCCACCTGCTGTCCTCCTCTTTCCTCATCGCGTTCCCGCGCGCCG TCGCGGCGAGGAGGTGCGGCGAGGCGGCCGCGGCGCCGAGGAGGGTGGGCGCGGTGACCG TGCGCGCGCAGGCGGCGGCGGGGGCGGGGAAGAAGAGCGTGCTGATCGTGAACACGAATG GCGGCGGGCACGCCGTGATCGGGTTCTACCTCGCCAAGGACCTGCTCGCCGCGGGCCACG CCGTCACCGTGCTCACCGTCGGCGACGAGGGCTCCGACAAGATGAAGAAGCCGCCCTTCT CCCGCTTCTCGGAGCTGACGAGTGCCGGGGCGACGACGGTGTGGGGCGACCCGGCGGACG TCGGCGCGGCGGTCGGCGGCGGCGCCTCGTTCGACGTCGTCCTCGACAACAACGGCAAGG ACCTCGACGCCGTCAAGCCGGTGGTGGACTGGGCGAAGGCGGCCGGCGTGGCGCAATTCC TCTTCGTCAGCAGCGCCGGCATCTACACGCCCAGCGACGAGCCGCCGCACGTCGAGGGGG ACGCGGTGAAGGAGAGCGCGGGGCATGTGGGCGTGGAGAAGTACATCGCGGAGCAGTTCG GCAGCTGGGCGTCGTTCCGGCCGCAGTACATGATCGGCTCCGGCAACAACAAGGACTGCG AGGAGTGGTTCTTCGACAGGATTGTGAGGGGGAGGCCGGTGCCGATCCCGGGGTCGGGGA TGCAGGTGACGAACATATCGCACGTGCGCGACCTGGCGAGCATGGTGGCGCTCGCCGTGG AGAGCCCCGGCGCGGCGGCGGGGAGGATCTTCAACTGCGTCTCCGACCGCGCCGTCACCT TCAACGGCCTCGTCAAGATGTGCGCCGCCGCCGCCGGCGCCCAGCCGGAGATCCTCCACT ACGACCCCGCCGCCGTCGGCGTCGACGCCAAGAAGGCCTTCCCCTTCCGCAACATGCACT TCTACGCGGAGCCGAGGGCGGCGAAGGAGGTGCTTGGATGGAGGAGCTCGACGAACCTGC CGGAGGACCTCAAGGAGAGGTTCGCGGAGTACGCCAGCAGCGGCAGAGGGCAGAAGGAGA TGAGCTTCGACCTCGACGACAAGATCATCGCCGCCGCCTAACAACACCCATCTCATCTCA CCTCGTCATGGTCAAATACAAATACAAAGTGCTCGGGGATCTCTTCTTCTCGTGATTTAT TTTCTTCTCCCTCTGTTTCTTTGGTTCCTCTTCTCATACCGGAAGCATAGAGAAATGCAA AACTGAACAATTATATATGTAAATGCTAGGAAAATGCTGTTACAAATAAGTGAATAAGAT GAGTTTTCGCTTTTCGTTTTTCATTTTTCCATCACATATCCAATATGAGAATGGAACTTT GCAGAGTCAATCAGATTCAGC