Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0209100-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:5890575:5894128:-1 gene:Os07g0209100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Seed imbibition protein (Fragment). (Os07t0209100-01)
Sequence	ATGACGGTGACGCCGCAGATCACGGTGAGCGACGGGAGGCTGGCGGTGCGGGGGCGGACG GTGCTGACCGGCGTGCCGGAGAACGTGACGGCGGCGCACGCGTCCGGCGCCGGGCTCGTC GACGGCGCCTTCGTCGGCGCCGACGCCGGCGAGGCCAAGAGCCACCACGTCTTCACCTTC GGCACGCTCCGGGAATGCCGGTTCATGTGCCTGTTCAGGTTCAAGCTGTGGTGGATGACG CAGAGGATGGGCTCCTCCGGCCGCGACGTCCCGCTCGAGACCCAGTTCATGCTCATCGAG GTCCCCGCCACCGCCGCCGGCGACGGCCACGACGGCGGCGGCGACGGCGAGCCGGTGTTC GTGGTGATGCTGCCGCTGCTGGAGGGGAAGTTCCGCGCGGCGCTGCAGGGAAACGACGAC GACGAGCTCCAGATATGCATCGAGAGCGGGGATAAGGCGGTGCAGACAGAGCAGGGCGTG AACATGGTGTACATCCACGCTGGGACCAACCCCTTCGACACGATCACCCAAGCCATCAAG GCAGTGGAGAAGCGAATGCAGACGTTCCACCACAGGGACAAGAAGAAGATGCCGTCCTTC TTGGATTGGTTCGGGTGGTGCACATGGGACGCGTTCTACACCGACGTCACCGCCGACGGC GTCAAGCAGGGCCTCCGCAGCCTCGCCAATGGCGGCGCGCCGCCGCGCTTCCTCATCATC GACGACGGCTGGCAGCAGATCGGCACCGAGGACGACGACACGGACGAACACCCCGCCGTC GCCGTCCAGGAGGGCGCCCAGTTCGCCAGCCGGCTCACCGGCATCAAGGAGAACGTCAAG TTCCAGAGCAAGAACGGCGGCGCCGGCGAGGACACGCCGGGGCTGAGGATGCTGGTGGAG GAGGTGAAGGGGGAGCACGGCGTCCGGCAGGTGTACGTGTGGCACGCCATGGCCGGGTAC TGGGGCGGCGTGGCGCCGGCGCCGGCGATGGAGCGGTACGAGGCGGCGCTGGCGTACCCG GTGCAGTCGCCGGGGGTGACGGCGAACCAGCCGGACATCGTCATGGACTCCCTCTCCGTG CTCGGCCTGGGCCTCGTCCACCCGCGCAAGGTGCTCGACTTCTACGACGAGCTCCACGCC TACCTGGCGTCGTGCGGCGTCGACGGCGTGAAGGTGGACGTGCAGAACATCATCGAGACG CTCGGCGCCGGCCACGGCGGCCGCGTCGCGCTCACGCGCGCCTACAACCGCGCGCTCGAG GCGTCCGTGGCGCGGAGCTTCCCGGACAACGGCTGCATCTCCTGCATGTGCCACAACACC GACATGCTCTACAGCGCGCGCCAGACCGCCGTCGTCCGCGCCTCCGACGACTTCTACCCT CGCGACCCGGCGTCCCACACCATCCACGTCGCCTCCGTCGCCTACAACACCGTCTTCCTC GGCGAGTTCATGCAGCCCGACTGGGACATGTTCCATAGCTTGCACCCGGCGGCGGAGTAC CACGGCGCGGCGAGGGCGATCGGCGGGTGTCCGATCTACGTCAGCGACAAGCCGGGGAAC CACAACTTCGATCTGCTCAGGAAGCTCGTCCTCCCCGACGGCTCCGTGCTCCGGGCGCGC CTCCCCGGCCGCCCCACCCGCGACTGCCTCTTCTCCGACCCGGCGCGCGACGGCGAGAGT TTGCTCAAGATATGGAACCTGAACAATTGCGGCGGCGTGGTCGGGGTGTTCAACTGCCAG GGCGCCGGGTGGTGCAGGGTGGCCAAGAAGACGCGCGTGCACGACGCGGCGCCCGGGACG CTCACCGGCGCCGTGCGCGCCGACGACGTCGACGCCATCGCGCAGGTCGCCGGCGGCGAC GGCGGAGGCTGGGACGGGGAGGCCGTGGTGTACGCGCACCGGGCGCGTGAGCTGGTCCGG CTGCCGCGCGGCGCCGCGCTGCCGGTGACGCTCGGGGCGCTCGAGTACGAGGTGTTCCAC GTCTGCCCCGTCCGCGCCATCGCCGCGGCGCCGGGCGGCGCCGCCGTCGCGTTCGCGCCC GTCGGGCTCCTCGACATGTTCAACGCCGGCGGCGCCGTCGAGGAGTGCGCCGTCGATGCC GCAGCCGCCGTGGCGCTCAGGGTGCGCGGTTGCGGCCGGTTCGGCGCCTACTTCTCGCGG AGGCCGGCGAGGTGCGCGCTCGACGGCGCCGACGTGGGGTTCACCTACGACGGCGACACG GGGCTCGTCGCCGTCGACCTGCCGGTGCCGGAGCAGGAGATGTACAGGTGGAACCTGGAG ATTCACGTCTAG

Peptide Sequence

PEP ID	Os07t0209100-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:5890575:5894128:-1 gene:Os07g0209100 transcript:Os07t0209100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Seed imbibition protein (Fragment). (Os07t0209100-01)
Sequence	MTVTPQITVSDGRLAVRGRTVLTGVPENVTAAHASGAGLVDGAFVGADAGEAKSHHVFTF GTLRECRFMCLFRFKLWWMTQRMGSSGRDVPLETQFMLIEVPATAAGDGHDGGGDGEPVF VVMLPLLEGKFRAALQGNDDDELQICIESGDKAVQTEQGVNMVYIHAGTNPFDTITQAIK AVEKRMQTFHHRDKKKMPSFLDWFGWCTWDAFYTDVTADGVKQGLRSLANGGAPPRFLII DDGWQQIGTEDDDTDEHPAVAVQEGAQFASRLTGIKENVKFQSKNGGAGEDTPGLRMLVE EVKGEHGVRQVYVWHAMAGYWGGVAPAPAMERYEAALAYPVQSPGVTANQPDIVMDSLSV LGLGLVHPRKVLDFYDELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVALTRAYNRALE ASVARSFPDNGCISCMCHNTDMLYSARQTAVVRASDDFYPRDPASHTIHVASVAYNTVFL GEFMQPDWDMFHSLHPAAEYHGAARAIGGCPIYVSDKPGNHNFDLLRKLVLPDGSVLRAR LPGRPTRDCLFSDPARDGESLLKIWNLNNCGGVVGVFNCQGAGWCRVAKKTRVHDAAPGT LTGAVRADDVDAIAQVAGGDGGGWDGEAVVYAHRARELVRLPRGAALPVTLGALEYEVFH VCPVRAIAAAPGGAAVAFAPVGLLDMFNAGGAVEECAVDAAAAVALRVRGCGRFGAYFSR RPARCALDGADVGFTYDGDTGLVAVDLPVPEQEMYRWNLEIHV

Transcript Sequence

Transcript ID	Os07t0209100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:5890575:5894128:-1 gene:Os07g0209100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Seed imbibition protein (Fragment). (Os07t0209100-01)
Sequence	TCTATCTCCCTCTCTTTTGAGGAGGGCACCGCCATTTAGTTAATTAGTAGTTGTTAATTA TCTTCACTAACCTTAATTACCCTCACGCAAAGCACTCTCTAATCCTCCTCGGCGCTCGCA TAATCTTGTATCCCTCATCTCAGATTATCATCACCTCGCCGTGTTAGAAAAAAGGGAGTA AGTTCGTTTTATCGTCGGATTTGGTGAGAGTTCGCCGGAGTAGAAGAAGATGACGGTGAC GCCGCAGATCACGGTGAGCGACGGGAGGCTGGCGGTGCGGGGGCGGACGGTGCTGACCGG CGTGCCGGAGAACGTGACGGCGGCGCACGCGTCCGGCGCCGGGCTCGTCGACGGCGCCTT CGTCGGCGCCGACGCCGGCGAGGCCAAGAGCCACCACGTCTTCACCTTCGGCACGCTCCG GGAATGCCGGTTCATGTGCCTGTTCAGGTTCAAGCTGTGGTGGATGACGCAGAGGATGGG CTCCTCCGGCCGCGACGTCCCGCTCGAGACCCAGTTCATGCTCATCGAGGTCCCCGCCAC CGCCGCCGGCGACGGCCACGACGGCGGCGGCGACGGCGAGCCGGTGTTCGTGGTGATGCT GCCGCTGCTGGAGGGGAAGTTCCGCGCGGCGCTGCAGGGAAACGACGACGACGAGCTCCA GATATGCATCGAGAGCGGGGATAAGGCGGTGCAGACAGAGCAGGGCGTGAACATGGTGTA CATCCACGCTGGGACCAACCCCTTCGACACGATCACCCAAGCCATCAAGGCAGTGGAGAA GCGAATGCAGACGTTCCACCACAGGGACAAGAAGAAGATGCCGTCCTTCTTGGATTGGTT CGGGTGGTGCACATGGGACGCGTTCTACACCGACGTCACCGCCGACGGCGTCAAGCAGGG CCTCCGCAGCCTCGCCAATGGCGGCGCGCCGCCGCGCTTCCTCATCATCGACGACGGCTG GCAGCAGATCGGCACCGAGGACGACGACACGGACGAACACCCCGCCGTCGCCGTCCAGGA GGGCGCCCAGTTCGCCAGCCGGCTCACCGGCATCAAGGAGAACGTCAAGTTCCAGAGCAA GAACGGCGGCGCCGGCGAGGACACGCCGGGGCTGAGGATGCTGGTGGAGGAGGTGAAGGG GGAGCACGGCGTCCGGCAGGTGTACGTGTGGCACGCCATGGCCGGGTACTGGGGCGGCGT GGCGCCGGCGCCGGCGATGGAGCGGTACGAGGCGGCGCTGGCGTACCCGGTGCAGTCGCC GGGGGTGACGGCGAACCAGCCGGACATCGTCATGGACTCCCTCTCCGTGCTCGGCCTGGG CCTCGTCCACCCGCGCAAGGTGCTCGACTTCTACGACGAGCTCCACGCCTACCTGGCGTC GTGCGGCGTCGACGGCGTGAAGGTGGACGTGCAGAACATCATCGAGACGCTCGGCGCCGG CCACGGCGGCCGCGTCGCGCTCACGCGCGCCTACAACCGCGCGCTCGAGGCGTCCGTGGC GCGGAGCTTCCCGGACAACGGCTGCATCTCCTGCATGTGCCACAACACCGACATGCTCTA CAGCGCGCGCCAGACCGCCGTCGTCCGCGCCTCCGACGACTTCTACCCTCGCGACCCGGC GTCCCACACCATCCACGTCGCCTCCGTCGCCTACAACACCGTCTTCCTCGGCGAGTTCAT GCAGCCCGACTGGGACATGTTCCATAGCTTGCACCCGGCGGCGGAGTACCACGGCGCGGC GAGGGCGATCGGCGGGTGTCCGATCTACGTCAGCGACAAGCCGGGGAACCACAACTTCGA TCTGCTCAGGAAGCTCGTCCTCCCCGACGGCTCCGTGCTCCGGGCGCGCCTCCCCGGCCG CCCCACCCGCGACTGCCTCTTCTCCGACCCGGCGCGCGACGGCGAGAGTTTGCTCAAGAT ATGGAACCTGAACAATTGCGGCGGCGTGGTCGGGGTGTTCAACTGCCAGGGCGCCGGGTG GTGCAGGGTGGCCAAGAAGACGCGCGTGCACGACGCGGCGCCCGGGACGCTCACCGGCGC CGTGCGCGCCGACGACGTCGACGCCATCGCGCAGGTCGCCGGCGGCGACGGCGGAGGCTG GGACGGGGAGGCCGTGGTGTACGCGCACCGGGCGCGTGAGCTGGTCCGGCTGCCGCGCGG CGCCGCGCTGCCGGTGACGCTCGGGGCGCTCGAGTACGAGGTGTTCCACGTCTGCCCCGT CCGCGCCATCGCCGCGGCGCCGGGCGGCGCCGCCGTCGCGTTCGCGCCCGTCGGGCTCCT CGACATGTTCAACGCCGGCGGCGCCGTCGAGGAGTGCGCCGTCGATGCCGCAGCCGCCGT GGCGCTCAGGGTGCGCGGTTGCGGCCGGTTCGGCGCCTACTTCTCGCGGAGGCCGGCGAG GTGCGCGCTCGACGGCGCCGACGTGGGGTTCACCTACGACGGCGACACGGGGCTCGTCGC CGTCGACCTGCCGGTGCCGGAGCAGGAGATGTACAGGTGGAACCTGGAGATTCACGTCTA GGATGCTGCTGCTGCCACGTGGCGGTGCGATCTTTGCCCTCTGGTGTTCGTGGCTGAGAC ATTCCCAGCCGTTGGATCATTGCCATTGATGGTTTGCAGCAGAGATGGACGGACCGATGG AGAGATTGTGATGTGCCCTCTTACGACTTGCAACGCGGTAGAGGGAGTATGCTTTGCTAC ATCTAAAATGAAAGAAGAAAATTATAGTATGCTTTTGTCATGTTATGGCTTGTAAAATGC AATAATATGATGTAATGCTATGGTTTATGTATTATTATTAGCTGATAAATAAAGGATGGT GCTCCTT