Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0208500-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:5852783:5858718:-1 gene:Os07g0208500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE A8 description:Similar to Cellulose synthase-4. (Os07t0208500-01);Cellulose synthase domain containing protein. (Os07t0208500-02)
Sequence	ATGGACGGCGACGCGGATGCCGTGAAGTCGGGGAGGCACGGGAGCGGGCAGGCGTGCCAG ATCTGCGGCGACGGCGTGGGCACGACGGCGGAGGGCGACGTGTTCGCCGCCTGCGACGTC TGCGGCTTCCCGGTGTGCCGCCCCTGCTACGAGTACGAGCGCAAGGATGGCACCCAGGCT TGCCCCCAGTGCAAGACCAAGTACAAGCGCCACAAGGGGAGCCCGGCGATCCGTGGGGAG GAAGGCGAGGATACTGATGCTGATGATGTCAGTGACTACAACTACCCTGCATCTGGCAGT GCCGACCAGAAGCAGAAGATTGCTGATAGGATGCGCAGTTGGCGCATGAATGCTGGGGGT GGTGGAGACGTCGGCCGTCCCAAGTATGACAGTGGCGAGATCGGGCTCACCAAGTATGAC AGTGGCGAGATCCCTCGGGGATACATCCCTTCAGTCACTAATAGCCAGATCTCGGGAGAA ATCCCTGGAGCTTCCCCTGATCATCATATGATGTCTCCTACCGGAAACATTGGCAAGCGT GCTCCATTCCCCTATGTGAACCATTCACCAAATCCATCAAGGGAGTTCTCTGGCAGCATT GGAAATGTTGCCTGGAAAGAAAGAGTTGATGGCTGGAAACTGAAGCAGGACAAGGGAGCA ATTCCCATGACCAACGGGACAAGCATTGCCCCTTCTGAAGGTCGGGGAGTTGGTGATATC GATGCATCCACTGATTACAATATGGAAGATGCCTTACTGAATGATGAAACTCGCCAGCCT CTCTCTAGAAAAGTTCCCCTTCCTTCATCCAGAATAAATCCCTACAGAATGGTCATTGTT CTGCGTTTGGTTGTTCTAAGCATTTTCCTTCACTACCGTATTACGAATCCTGTGCGCAAT GCGTATCCGCTCTGGCTTTTATCTGTTATATGTGAGATTTGGTTTGCTTTGTCCTGGATA TTGGATCAGTTCCCGAAGTGGTTTCCAATCAACCGTGAAACCTACCTTGATAGGCTGGCA TTGAGGTATGACAGAGAAGGTGAGCCATCTCAGTTGGCTGCTGTTGACATTTTTGTCAGT ACAGTCGACCCCATGAAGGAACCTCCTCTTGTTACTGCCAATACCGTGCTGTCCATTCTT GCTGTTGATTACCCAGTGGACAAGGTCTCTTGCTATGTATCTGACGATGGTGCTGCAATG CTGACTTTTGATGCATTGGCTGAGACTTCAGAGTTTGCTAGAAAGTGGGTTCCATTCGTT AAGAAGTATAACATTGAGCCAAGAGCTCCTGAGTGGTACTTCTCCCAGAAAATCGATTAC TTGAAAGACAAAGTCCACCCTTCATTTGTTAAAGACCGTCGTGCCATGAAGAGAGAATAT GAAGAATTCAAAGTTAGGATAAATGGCCTTGTTGCTAAGGCACAGAAAGTCCCGGAGGAG GGATGGATCATGCAAGATGGCACACCATGGCCAGGAAACAATACTAGGGACCATCCTGGA ATGATTCAGGTTTTCCTTGGTCACAGTGGTGGCCTTGATACCGAGGGTAATGAGCTTCCC CGCCTGGTCTACGTATCTCGTGAGAAGCGTCCTGGGTTTCAGCACCACAAGAAGGCTGGT GCCATGAATGCTCTTGTTCGTGTCTCAGCTGTGCTTACCAATGGACAGTACATGTTGAAT CTTGATTGTGATCACTACATCAACAACAGCAAGGCTCTGCGGGAAGCTATGTGCTTCCTT ATGGATCCAAACCTAGGAAGGAGTGTCTGTTATGTTCAGTTCCCACAAAGGTTCGATGGT ATTGATAGGAATGATCGATATGCGAACAGGAACACTGTGTTTTTCGATATTAACTTGAGG GGTCTTGATGGCATCCAAGGACCAGTTTATGTGGGAACTGGTTGTGTATTCAACAGAACT GCTCTATATGGTTATGAACCCCCAATTAAGCAGAAGAAGAAGGGAAGTTTCTTGTCATCA CTATGTGGGGGCAGGAAGAAGGCAAGCAAGTCAAAGAAGAAGAGTTCGGACAAGAAGAAG TCAAACAAGCACGTGGACAGTGCTGTGCCAGTTTTCAATCTTGAAGATATAGAGGAGGGT GTTGAAGGTGCTGGATTCGATGATGAGAAATCACTTCTTATGTCTCAAATGAGCTTGGAG AAGAGATTTGGCCAGTCTGCAGCGTTTGTTGCCTCCACTCTCATGGAATATGGTGGTGTT CCTCAATCTGCAACCCCAGAATCTCTTTTGAAAGAAGCTATCCATGTGATAAGTTGTGGC TATGAGGACAAGACCGAATGGGGAACTGAGATTGGGTGGATCTACGGTTCCGTGACAGAA GATATTCTCACTGGATTCAAGATGCATGCGCGAGGCTGGAGATCAATCTACTGCATGCCC AAGCGCCCAGCTTTCAAGGGGTCTGCTCCTATCAATCTTTCAGATCGTCTTAACCAAGTG CTTCGGTGGGCACTTGGTTCTGTTGAAATTCTTTTCAGTCGCCATTGTCCCATATGGTAC GGCTATGGAGGACGCCTTAAGTTCTTGGAGAGATTTGCCTACATCAACACCACTATTTAT CCATTGACATCGATCCCGCTTCTCATATACTGTGTTTTGCCTGCTATCTGTTTGCTCACT GGGAAGTTCATCATCCCAGAGATTAGCAACTTTGCTAGTATTTGGTTCATCTCTCTCTTC ATTTCAATTTTTGCCACTGGTATCCTTGAGATGAGGTGGAGTGGTGTTGGCATCGATGAG TGGTGGAGGAATGAACAGTTCTGGGTTATTGGAGGTATATCTGCGCATCTTTTTGCCGTC TTCCAGGGTCTCCTCAAGGTGCTTGCTGGTATCGACACCAATTTCACTGTCACCTCAAAG GCTTCTGATGAAGATGGCGACTTTGCTGAGCTCTACATGTTCAAGTGGACAACGCTTCTC ATCCCACCGACGACCATCTTGATCATTAACCTGGTCGGTGTTGTTGCTGGTATCTCATAC GCGATCAACAGCGGCTACCAATCATGGGGACCGCTCTTTGGCAAGCTCTTCTTTGCCTTC TGGGTGATTGTCCACTTGTACCCCTTCCTCAAGGGTCTTATGGGTCGGCAAAACCGCACT CCGACCATCGTTGTTGTTTGGGCAATCCTTCTGGCTTCGATCTTCTCATTGCTGTGGGTT CGCATCGATCCATTCACCACCCGTGTCACCGGCCCAGATACCCAAACATGTGGCATCAAC TGCTAA

Peptide Sequence

PEP ID	Os07t0208500-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:5852783:5858718:-1 gene:Os07g0208500 transcript:Os07t0208500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE A8 description:Similar to Cellulose synthase-4. (Os07t0208500-01);Cellulose synthase domain containing protein. (Os07t0208500-02)
Sequence	MDGDADAVKSGRHGSGQACQICGDGVGTTAEGDVFAACDVCGFPVCRPCYEYERKDGTQA CPQCKTKYKRHKGSPAIRGEEGEDTDADDVSDYNYPASGSADQKQKIADRMRSWRMNAGG GGDVGRPKYDSGEIGLTKYDSGEIPRGYIPSVTNSQISGEIPGASPDHHMMSPTGNIGKR APFPYVNHSPNPSREFSGSIGNVAWKERVDGWKLKQDKGAIPMTNGTSIAPSEGRGVGDI DASTDYNMEDALLNDETRQPLSRKVPLPSSRINPYRMVIVLRLVVLSIFLHYRITNPVRN AYPLWLLSVICEIWFALSWILDQFPKWFPINRETYLDRLALRYDREGEPSQLAAVDIFVS TVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFV KKYNIEPRAPEWYFSQKIDYLKDKVHPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEE GWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAG AMNALVRVSAVLTNGQYMLNLDCDHYINNSKALREAMCFLMDPNLGRSVCYVQFPQRFDG IDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKQKKKGSFLSS LCGGRKKASKSKKKSSDKKKSNKHVDSAVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLE KRFGQSAAFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTE DILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWY GYGGRLKFLERFAYINTTIYPLTSIPLLIYCVLPAICLLTGKFIIPEISNFASIWFISLF ISIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTNFTVTSK ASDEDGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAF WVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQTCGIN C

Transcript Sequence

Transcript ID	Os07t0208500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:5852783:5858718:-1 gene:Os07g0208500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE A8 description:Similar to Cellulose synthase-4. (Os07t0208500-01);Cellulose synthase domain containing protein. (Os07t0208500-02)
Sequence	ACCTTTCGTCTACCTCCCGCCTCACACTCCTCCCCTCACCTCCTCTCCTCGATTAAATTA ACCCCCGAAATCCACCACCAAACGCTCGCGAGATTAATCCGATTTTAATCCTCGAGATTT GTTTAATGGCAGGGCTAATCTCGCCCCAGGCCTTGTAGAAAGCGACACCCAAACCAACTC ACCTCCATTGGTGAGGTGCCCTGTCCTTTTCTCTCTCCTCCTCCTCCTCCATAGTTAAGC TCCCCACCACCACTACTACTAGTAGTAGTAGCGCTGCCACCTCCCGCTCCACTCCCGCGT CCTCTGCTGGAAGCCTTCTTCTCCTCGCCGGGAGGATTCCAGCGCGGGATGCGGCGGTGC TGATCCCGGTGTGCACGGATCTTGGGTGTGATTCGGTGAGCTGAGAGCTGGTTTGCTGCT GCTGCAGCGTGCGCCATGGACGGCGACGCGGATGCCGTGAAGTCGGGGAGGCACGGGAGC GGGCAGGCGTGCCAGATCTGCGGCGACGGCGTGGGCACGACGGCGGAGGGCGACGTGTTC GCCGCCTGCGACGTCTGCGGCTTCCCGGTGTGCCGCCCCTGCTACGAGTACGAGCGCAAG GATGGCACCCAGGCTTGCCCCCAGTGCAAGACCAAGTACAAGCGCCACAAGGGGAGCCCG GCGATCCGTGGGGAGGAAGGCGAGGATACTGATGCTGATGATGTCAGTGACTACAACTAC CCTGCATCTGGCAGTGCCGACCAGAAGCAGAAGATTGCTGATAGGATGCGCAGTTGGCGC ATGAATGCTGGGGGTGGTGGAGACGTCGGCCGTCCCAAGTATGACAGTGGCGAGATCGGG CTCACCAAGTATGACAGTGGCGAGATCCCTCGGGGATACATCCCTTCAGTCACTAATAGC CAGATCTCGGGAGAAATCCCTGGAGCTTCCCCTGATCATCATATGATGTCTCCTACCGGA AACATTGGCAAGCGTGCTCCATTCCCCTATGTGAACCATTCACCAAATCCATCAAGGGAG TTCTCTGGCAGCATTGGAAATGTTGCCTGGAAAGAAAGAGTTGATGGCTGGAAACTGAAG CAGGACAAGGGAGCAATTCCCATGACCAACGGGACAAGCATTGCCCCTTCTGAAGGTCGG GGAGTTGGTGATATCGATGCATCCACTGATTACAATATGGAAGATGCCTTACTGAATGAT GAAACTCGCCAGCCTCTCTCTAGAAAAGTTCCCCTTCCTTCATCCAGAATAAATCCCTAC AGAATGGTCATTGTTCTGCGTTTGGTTGTTCTAAGCATTTTCCTTCACTACCGTATTACG AATCCTGTGCGCAATGCGTATCCGCTCTGGCTTTTATCTGTTATATGTGAGATTTGGTTT GCTTTGTCCTGGATATTGGATCAGTTCCCGAAGTGGTTTCCAATCAACCGTGAAACCTAC CTTGATAGGCTGGCATTGAGGTATGACAGAGAAGGTGAGCCATCTCAGTTGGCTGCTGTT GACATTTTTGTCAGTACAGTCGACCCCATGAAGGAACCTCCTCTTGTTACTGCCAATACC GTGCTGTCCATTCTTGCTGTTGATTACCCAGTGGACAAGGTCTCTTGCTATGTATCTGAC GATGGTGCTGCAATGCTGACTTTTGATGCATTGGCTGAGACTTCAGAGTTTGCTAGAAAG TGGGTTCCATTCGTTAAGAAGTATAACATTGAGCCAAGAGCTCCTGAGTGGTACTTCTCC CAGAAAATCGATTACTTGAAAGACAAAGTCCACCCTTCATTTGTTAAAGACCGTCGTGCC ATGAAGAGAGAATATGAAGAATTCAAAGTTAGGATAAATGGCCTTGTTGCTAAGGCACAG AAAGTCCCGGAGGAGGGATGGATCATGCAAGATGGCACACCATGGCCAGGAAACAATACT AGGGACCATCCTGGAATGATTCAGGTTTTCCTTGGTCACAGTGGTGGCCTTGATACCGAG GGTAATGAGCTTCCCCGCCTGGTCTACGTATCTCGTGAGAAGCGTCCTGGGTTTCAGCAC CACAAGAAGGCTGGTGCCATGAATGCTCTTGTTCGTGTCTCAGCTGTGCTTACCAATGGA CAGTACATGTTGAATCTTGATTGTGATCACTACATCAACAACAGCAAGGCTCTGCGGGAA GCTATGTGCTTCCTTATGGATCCAAACCTAGGAAGGAGTGTCTGTTATGTTCAGTTCCCA CAAAGGTTCGATGGTATTGATAGGAATGATCGATATGCGAACAGGAACACTGTGTTTTTC GATATTAACTTGAGGGGTCTTGATGGCATCCAAGGACCAGTTTATGTGGGAACTGGTTGT GTATTCAACAGAACTGCTCTATATGGTTATGAACCCCCAATTAAGCAGAAGAAGAAGGGA AGTTTCTTGTCATCACTATGTGGGGGCAGGAAGAAGGCAAGCAAGTCAAAGAAGAAGAGT TCGGACAAGAAGAAGTCAAACAAGCACGTGGACAGTGCTGTGCCAGTTTTCAATCTTGAA GATATAGAGGAGGGTGTTGAAGGTGCTGGATTCGATGATGAGAAATCACTTCTTATGTCT CAAATGAGCTTGGAGAAGAGATTTGGCCAGTCTGCAGCGTTTGTTGCCTCCACTCTCATG GAATATGGTGGTGTTCCTCAATCTGCAACCCCAGAATCTCTTTTGAAAGAAGCTATCCAT GTGATAAGTTGTGGCTATGAGGACAAGACCGAATGGGGAACTGAGATTGGGTGGATCTAC GGTTCCGTGACAGAAGATATTCTCACTGGATTCAAGATGCATGCGCGAGGCTGGAGATCA ATCTACTGCATGCCCAAGCGCCCAGCTTTCAAGGGGTCTGCTCCTATCAATCTTTCAGAT CGTCTTAACCAAGTGCTTCGGTGGGCACTTGGTTCTGTTGAAATTCTTTTCAGTCGCCAT TGTCCCATATGGTACGGCTATGGAGGACGCCTTAAGTTCTTGGAGAGATTTGCCTACATC AACACCACTATTTATCCATTGACATCGATCCCGCTTCTCATATACTGTGTTTTGCCTGCT ATCTGTTTGCTCACTGGGAAGTTCATCATCCCAGAGATTAGCAACTTTGCTAGTATTTGG TTCATCTCTCTCTTCATTTCAATTTTTGCCACTGGTATCCTTGAGATGAGGTGGAGTGGT GTTGGCATCGATGAGTGGTGGAGGAATGAACAGTTCTGGGTTATTGGAGGTATATCTGCG CATCTTTTTGCCGTCTTCCAGGGTCTCCTCAAGGTGCTTGCTGGTATCGACACCAATTTC ACTGTCACCTCAAAGGCTTCTGATGAAGATGGCGACTTTGCTGAGCTCTACATGTTCAAG TGGACAACGCTTCTCATCCCACCGACGACCATCTTGATCATTAACCTGGTCGGTGTTGTT GCTGGTATCTCATACGCGATCAACAGCGGCTACCAATCATGGGGACCGCTCTTTGGCAAG CTCTTCTTTGCCTTCTGGGTGATTGTCCACTTGTACCCCTTCCTCAAGGGTCTTATGGGT CGGCAAAACCGCACTCCGACCATCGTTGTTGTTTGGGCAATCCTTCTGGCTTCGATCTTC TCATTGCTGTGGGTTCGCATCGATCCATTCACCACCCGTGTCACCGGCCCAGATACCCAA ACATGTGGCATCAACTGCTAAGAAAGCAGGGGATTGTAGAGACAGAAATACTGCCAGTTG TGTTTTTTCAGAATACAAAGTGCCACTGCCACCAATTGTGTTTTAAGTTATTAGGAGGTG GCTTTATTTACAGCTACGTACAGACCAGAAAATATTGCTCATCAGAAAGTTACTTGTGTC GATATGTATTCTTTTGTTGATAAGTTATATACTATTTTGATGAGAGTGGCTGACACTGTC AACGAGTTTTGTATCTTATGAAGGACACAATAAACTATTAGTTTGCATTCTTT