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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0208000-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:5819764:5821777:-1 gene:Os07g0208000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S15A. (Os07t0208000-01)
Sequence

ATGGTGAGAGTCAGTGTCCTCAATGACGCTCTGAAAACCATGTACAATGCTGAGAAGCGT
GGTAAGCGCCAAGTTCTTATCCGGCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTC
ATGCAGAAGCATGGTTACATTGGTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAG
ATCGTGGTTGAGCTGAATGGACGCCTTAACAAGTGTGGTGTCATCAGCCCACGCTTTGAT
GTTGGTGTCAAGGAAATCGAGTCCTGGACTGCTAGGCTGCTTCCCTCCCGTCAGTTTGGG
TACATTGTCCTTACCACCTCTGCCGGAATCATGGACCACGAAGAAGCGAGGCGGAAGAAC
GTCGGAGGCAAGGTGCTCGGCTTTTTCTACTAG

Peptide Sequence

PEP ID

Os07t0208000-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:5819764:5821777:-1 gene:Os07g0208000 transcript:Os07t0208000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S15A. (Os07t0208000-01)
Sequence

MVRVSVLNDALKTMYNAEKRGKRQVLIRPSSKVIIKFLIVMQKHGYIGEFEFVDDHRSGK
IVVELNGRLNKCGVISPRFDVGVKEIESWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN
VGGKVLGFFY

Transcript Sequence

Transcript ID

Os07t0208000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:5819764:5821777:-1 gene:Os07g0208000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S15A. (Os07t0208000-01)
Sequence

AAAACCCTCAGCCGCCGCCGCCCGAGCAGAGAAGCCGCCTTCGCCGCCGCCGCCGCACTC
CACCGCGCGCTCTCCGTCTCCGGCCGCCGCCAGACAAGATGGTGAGAGTCAGTGTCCTCA
ATGACGCTCTGAAAACCATGTACAATGCTGAGAAGCGTGGTAAGCGCCAAGTTCTTATCC
GGCCCTCGTCAAAGGTGATCATCAAGTTCCTCATCGTCATGCAGAAGCATGGTTACATTG
GTGAGTTTGAGTTTGTTGATGACCACCGGTCTGGCAAGATCGTGGTTGAGCTGAATGGAC
GCCTTAACAAGTGTGGTGTCATCAGCCCACGCTTTGATGTTGGTGTCAAGGAAATCGAGT
CCTGGACTGCTAGGCTGCTTCCCTCCCGTCAGTTTGGGTACATTGTCCTTACCACCTCTG
CCGGAATCATGGACCACGAAGAAGCGAGGCGGAAGAACGTCGGAGGCAAGGTGCTCGGCT
TTTTCTACTAGAGATATTCATCTCACATGGAAGATTTTCTCAGGTGTTAGCAAGAAGAGC
TTTGTTAGTAGTGGGAGTCTGAGAACTTGTTAAGATTATTGTCTCCTATGTCTGAATTAC
CCCCCAATCTGTTTTTATTTTGCTTGGCGACTGAGTGAGCTGCTGTACTTTTCTCCATCG
TATGATGGCTCAGAATCTTGCATGATGCGTGCCTGCCTTTTTGATACTCCTAATCTTTTA
CAAGTTACTATAAACTTCCTGGG