Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0204900-03
CDS Infomation	cds chromosome:IRGSP-1.0:7:5648492:5650901:1 gene:Os07g0204900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zeta-carotene desaturase (Fragment). (Os07t0204900-01);Similar to Zeta-carotene desaturase. (Os07t0204900-02);Similar to Zeta-carotene desaturase. (Os07t0204900-03)
Sequence	AGCGATTGGTTCTTGTCGAAAGGTGGTACTCGAGAGAGCATCACAAGGATGTGGGATCCT GTTGCCTATGCTCTTGGTTTCATTGACTGTGATAATATCAGTGCACGTTGCATGCTTACC ATTTTCACTCTGTTTGCCACAAAAACAGAGGCATCTTTATTACGCATGCTAAAGGGTTCA CCTGATGTTTATCTGAGTGGTCCAATAAAGAAGTACATAACAGACAGGGGTGGTAGGTTT CACCTGAGGTGGGGATGTAGGGAGGTTCTCTATGATAAGTCACCTGATGGGGAAACCTAT GTTAAAGGCCTTCTCCTATCCAAGGCTACAAGTAGAGAGATAATCAAAGCAGATGCATAT GTCGCAGCTTGTGATGTCCCGGGGATCAAAAGACTTTTACCTTCTGAATGGAGGCAATGG GATACATTTGACAACATCTACAAGTTAGATGGTGTTCCTGTAGTCACAGTACAGCTTCGT TATAATGGATGGGTTACAGAACTTCAAGATTTGGAGAAATCAAGACAACTGAAAAAGGCA GTTGGCTTGGATAATCTTCTCTACACTCCAGATGCAGATTTTTCATGTTTTTCAGACCTT GCACTTTCATCTCCTGCTGACTACTACATTGAAGGACAAGGTTCCTTGATCCAAGCTGTG CTAACCCCTGGCGATCCTTACATGCCATTGCCGAATGAGGAGATAATTAGCAAGGTTCAA AAGCAGGTCTTAGAATTGTTCCCGTCATCACAAGGCTTGGAACTTACATGGTCGAGTGTG GTGAAAATCGGTCAATCATTGTACCGCGAGTCACCAGGAAATGATCCATTTAGACCTGAT CAAAAGACACCAGTTAAAAACTTCTTCCTGTCTGGCTCTTACACAAAACAGGACTACATT GACAGCATGGAAGGGGCAACTCTCTCAGGCAGGAGAACCGCGGCCTACATCTGTGGTGCA GGAGAGGAGCTGCTCGCCCTCCGAAAGAAGCTCATTGTCGACGACAGCGAGAAGGCCAGG GGTAAGGTCGAGGCCCTTCAGACAAGCTGA

Peptide Sequence

PEP ID	Os07t0204900-03
PEP Infomation	pep chromosome:IRGSP-1.0:7:5648492:5650901:1 gene:Os07g0204900 transcript:Os07t0204900-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zeta-carotene desaturase (Fragment). (Os07t0204900-01);Similar to Zeta-carotene desaturase. (Os07t0204900-02);Similar to Zeta-carotene desaturase. (Os07t0204900-03)
Sequence	SDWFLSKGGTRESITRMWDPVAYALGFIDCDNISARCMLTIFTLFATKTEASLLRMLKGS PDVYLSGPIKKYITDRGGRFHLRWGCREVLYDKSPDGETYVKGLLLSKATSREIIKADAY VAACDVPGIKRLLPSEWRQWDTFDNIYKLDGVPVVTVQLRYNGWVTELQDLEKSRQLKKA VGLDNLLYTPDADFSCFSDLALSSPADYYIEGQGSLIQAVLTPGDPYMPLPNEEIISKVQ KQVLELFPSSQGLELTWSSVVKIGQSLYRESPGNDPFRPDQKTPVKNFFLSGSYTKQDYI DSMEGATLSGRRTAAYICGAGEELLALRKKLIVDDSEKARGKVEALQTS

Transcript Sequence

Transcript ID	Os07t0204900-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:5648492:5650901:1 gene:Os07g0204900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zeta-carotene desaturase (Fragment). (Os07t0204900-01);Similar to Zeta-carotene desaturase. (Os07t0204900-02);Similar to Zeta-carotene desaturase. (Os07t0204900-03)
Sequence	TCAGCGATTGGTTCTTGTCGAAAGGTGGTACTCGAGAGAGCATCACAAGGATGTGGGATC CTGTTGCCTATGCTCTTGGTTTCATTGACTGTGATAATATCAGTGCACGTTGCATGCTTA CCATTTTCACTCTGTTTGCCACAAAAACAGAGGCATCTTTATTACGCATGCTAAAGGGTT CACCTGATGTTTATCTGAGTGGTCCAATAAAGAAGTACATAACAGACAGGGGTGGTAGGT TTCACCTGAGGTGGGGATGTAGGGAGGTTCTCTATGATAAGTCACCTGATGGGGAAACCT ATGTTAAAGGCCTTCTCCTATCCAAGGCTACAAGTAGAGAGATAATCAAAGCAGATGCAT ATGTCGCAGCTTGTGATGTCCCGGGGATCAAAAGACTTTTACCTTCTGAATGGAGGCAAT GGGATACATTTGACAACATCTACAAGTTAGATGGTGTTCCTGTAGTCACAGTACAGCTTC GTTATAATGGATGGGTTACAGAACTTCAAGATTTGGAGAAATCAAGACAACTGAAAAAGG CAGTTGGCTTGGATAATCTTCTCTACACTCCAGATGCAGATTTTTCATGTTTTTCAGACC TTGCACTTTCATCTCCTGCTGACTACTACATTGAAGGACAAGGTTCCTTGATCCAAGCTG TGCTAACCCCTGGCGATCCTTACATGCCATTGCCGAATGAGGAGATAATTAGCAAGGTTC AAAAGCAGGTCTTAGAATTGTTCCCGTCATCACAAGGCTTGGAACTTACATGGTCGAGTG TGGTGAAAATCGGTCAATCATTGTACCGCGAGTCACCAGGAAATGATCCATTTAGACCTG ATCAAAAGACACCAGTTAAAAACTTCTTCCTGTCTGGCTCTTACACAAAACAGGACTACA TTGACAGCATGGAAGGGGCAACTCTCTCAGGCAGGAGAACCGCGGCCTACATCTGTGGTG CAGGAGAGGAGCTGCTCGCCCTCCGAAAGAAGCTCATTGTCGACGACAGCGAGAAGGCCA GGGGTAAGGTCGAGGCCCTTCAGACAAGCTGAGCTTCCTCAAATGACACATGCTGGAGTG AGTGGATTGCTATGCCCAAAACAAAAACAGCTTCCTGGGTGTAGTAGGCGATTTCCGCAG CGACTCTCATGTAAATCCTACTTGATTGAGCATTTAGGTCCAATCTGCTGCTGCCCTTTT TGCCTTGACACGATCGTTCGTTCGCCCGTCAATGGTGTGTTCTTCGTTATTGTGAATTTG TGATTGGGAACCAAAGGTGGCATACGGGATTACATC