Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0204500-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:5613844:5623624:-1 gene:Os07g0204500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Survival protein SurE family protein. (Os07t0204500-01);Survival protein SurE family protein. (Os07t0204500-02)
Sequence

ATGGACTCCTCCGCGGCGTCGGCGGCGGCTGCGGCGGCGGCGCCGGTGGTGCTGGTGACG
AACGACGACGGCATCGACGCGCCGGGACTCCGCTTCCTCGTCGGCCAGCTCGTCGCCGCC
CGCCGCTACCGCGTCCTCGTCTGCGCGCCCGACACAGACAGGTCAGGTGTTAGCCACTCC
ATCACATGGCGCCCTGCACTCCGCTGTAAACGAGTTGATATAGATGGTGCTACAGCATTT
GCAGCCTCAGGGACTCCTGCTGACTGTGCTTCTTTAGGCATATCTGGGAAGCTCTTTGAT
GGTTTGGTTCCTGATCTGGCAATCAGTGGAATCAATGTTGGCAACAATTGTGGATGCCAT
GTTATCTATTCTGGAACAGTTGGCGGTGCTAGGGAGGCATTCTTGTACGGGATTCCTTCA
TTAGCCATGTCATATGATTGGGTCGCAAGTCAGAGCAGTGTTAACGACCTCAAAGTAGCT
GCAGAGGTTGTTATGCCTCTGATAAATAATGTGATGGCTGAGATAAAGAATGGGACATAT
CCTCAAGGATCATTCTTGAATATAGATATACCAACTGATGCTGCACACCACAAGGGATAC
AAAATTACAAAGCAAGGAAGGTATATGGCCAGAATTGGTTGGGAGCAAACAGTTTATAAG
AAGCCTGCGGTAGAAAGTTACCAGACAGCAAACATGGATGTTGACAGTGAAAAGGACAGT
GAAGTAGATACTTCATCAGAGAATGACCTATTGTTTAAAAGAGTGCTTGTGAGGCGAAGT
TATGATGAAGAGGAAGGGGATGATATCGACCACAAGTGCCTTGTAGATGGATATATTACT
GTTACCCCTTTGGGAGCTCTATCCCGCGCAGAAGCTGATGTCATACCATACTACAAAGCT
TGCTTGTCACGTCTGTGA

Peptide Sequence

PEP ID

Os07t0204500-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:5613844:5623624:-1 gene:Os07g0204500 transcript:Os07t0204500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Survival protein SurE family protein. (Os07t0204500-01);Survival protein SurE family protein. (Os07t0204500-02)
Sequence

MDSSAASAAAAAAAPVVLVTNDDGIDAPGLRFLVGQLVAARRYRVLVCAPDTDRSGVSHS
ITWRPALRCKRVDIDGATAFAASGTPADCASLGISGKLFDGLVPDLAISGINVGNNCGCH
VIYSGTVGGAREAFLYGIPSLAMSYDWVASQSSVNDLKVAAEVVMPLINNVMAEIKNGTY
PQGSFLNIDIPTDAAHHKGYKITKQGRYMARIGWEQTVYKKPAVESYQTANMDVDSEKDS
EVDTSSENDLLFKRVLVRRSYDEEEGDDIDHKCLVDGYITVTPLGALSRAEADVIPYYKA
CLSRL

Transcript Sequence

Transcript ID

Os07t0204500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:5613844:5623624:-1 gene:Os07g0204500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Survival protein SurE family protein. (Os07t0204500-01);Survival protein SurE family protein. (Os07t0204500-02)
Sequence

GATGGACTCCTCCGCGGCGTCGGCGGCGGCTGCGGCGGCGGCGCCGGTGGTGCTGGTGAC
GAACGACGACGGCATCGACGCGCCGGGACTCCGCTTCCTCGTCGGCCAGCTCGTCGCCGC
CCGCCGCTACCGCGTCCTCGTCTGCGCGCCCGACACAGACAGGTCAGGTGTTAGCCACTC
CATCACATGGCGCCCTGCACTCCGCTGTAAACGAGTTGATATAGATGGTGCTACAGCATT
TGCAGCCTCAGGGACTCCTGCTGACTGTGCTTCTTTAGGCATATCTGGGAAGCTCTTTGA
TGGTTTGGTTCCTGATCTGGCAATCAGTGGAATCAATGTTGGCAACAATTGTGGATGCCA
TGTTATCTATTCTGGAACAGTTGGCGGTGCTAGGGAGGCATTCTTGTACGGGATTCCTTC
ATTAGCCATGTCATATGATTGGGTCGCAAGTCAGAGCAGTGTTAACGACCTCAAAGTAGC
TGCAGAGGTTGTTATGCCTCTGATAAATAATGTGATGGCTGAGATAAAGAATGGGACATA
TCCTCAAGGATCATTCTTGAATATAGATATACCAACTGATGCTGCACACCACAAGGGATA
CAAAATTACAAAGCAAGGAAGGTATATGGCCAGAATTGGTTGGGAGCAAACAGTTTATAA
GAAGCCTGCGGTAGAAAGTTACCAGACAGCAAACATGGATGTTGACAGTGAAAAGGACAG
TGAAGTAGATACTTCATCAGAGAATGACCTATTGTTTAAAAGAGTGCTTGTGAGGCGAAG
TTATGATGAAGAGGAAGGGGATGATATCGACCACAAGTGCCTTGTAGATGGATATATTAC
TGTTACCCCTTTGGGAGCTCTATCCCGCGCAGAAGCTGATGTCATACCATACTACAAAGC
TTGCTTGTCACGTCTGTGATCAGGATACTTTTGTGGCCCACTAAACTGAAAAAGTTGGTG
TCATGGTTGCAAGTTGCAAATAAAGTTGCATGAATTTCAGTTATTCTAGATGATTGTTAC
TGATGTATTGCCATATTATGTACTTCCGTGATTATTCAGAGCATATGTATCACATAGCTC
TTACTATTTATAACTACAGTTCCACAATAATTCTTTGGTATTATATTTTTCTGAGACTTG
TTGC