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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0204000-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:5593910:5594841:1 gene:Os07g0204000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 5 description:Pathogenesis-related transcriptional factor/ERF, DNA-binding domain containing protein. (Os07t0204000-00)
Sequence

ATGGAGCTCCAGTTCCAGAAGCCAACACAAGGGCAATCCCAGCAGCAGCAATGCCATTAC
CAAGTGCCAACCGTGACAGTGGCCAAGAACAAAGCGAAAACCAAGTGCAGCAGCAGTAAG
TTCGTGGGCGTCAGGCAGAGGCCCTCAGGGAGGTGGGTGGCAGAGATCAAGGACACCACC
CAGAAGATACGGATGTGGCTCGGCACGTTCGAGACCGCCGAGGAGGCTGCGCGGGCCTAC
GACGAGGCCGCATGCCTCCTCCGGGGCTCAAACACGCGCACCAACTTCGCAACGCAGGCT
GCACCAGACTCGCCGCTCGCGTCGAGGATCCGCACCATCCTCACCCACAAGAAGCTCAAG
AAGAGCATGCCCCAGCCTACCATCACCTTCAGCACCGCAGTATATCACCATGCTCGTAGC
ACTGTCCCTGCTGCTGCAACCAGCACAAGCACCAGTGGTGTCAGCCCCAGCAGAAGCAAC
AGCTCAAGCCTTAATTTTGCTACAAACCTCTCTAATTTTGCTATGAGTGGAGGTGAAGAA
TTGCAGCTGGCTTCTTCACAACAACAATATGATCAGTCATGGGCACTCAACACCAGCCTA
CTACCGATTGGGGATGGATGCGACATGTCAGGCAGCAATGCTTGCCCAGTGGCCTCAGAC
CAGGATAAGATGAAGGCAGAGAAGCAAGGCTCCCATGGTATGAATGGCATCCAGGAGCAG
GAAACCTTTGATATGGGTAATGATCTGTGCGACTCCTTGTGGGATCTGCCCCCTATTTGT
CAACTGTCCTGCAAGTATTAA

Peptide Sequence

PEP ID

Os07t0204000-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:5593910:5594841:1 gene:Os07g0204000 transcript:Os07t0204000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 5 description:Pathogenesis-related transcriptional factor/ERF, DNA-binding domain containing protein. (Os07t0204000-00)
Sequence

MELQFQKPTQGQSQQQQCHYQVPTVTVAKNKAKTKCSSSKFVGVRQRPSGRWVAEIKDTT
QKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFATQAAPDSPLASRIRTILTHKKLK
KSMPQPTITFSTAVYHHARSTVPAAATSTSTSGVSPSRSNSSSLNFATNLSNFAMSGGEE
LQLASSQQQYDQSWALNTSLLPIGDGCDMSGSNACPVASDQDKMKAEKQGSHGMNGIQEQ
ETFDMGNDLCDSLWDLPPICQLSCKY

Transcript Sequence

Transcript ID

Os07t0204000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:5593910:5594841:1 gene:Os07g0204000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 5 description:Pathogenesis-related transcriptional factor/ERF, DNA-binding domain containing protein. (Os07t0204000-00)
Sequence

ATGGAGCTCCAGTTCCAGAAGCCAACACAAGGGCAATCCCAGCAGCAGCAATGCCATTAC
CAAGTGCCAACCGTGACAGTGGCCAAGAACAAAGCGAAAACCAAGTGCAGCAGCAGTAAG
TTCGTGGGCGTCAGGCAGAGGCCCTCAGGGAGGTGGGTGGCAGAGATCAAGGACACCACC
CAGAAGATACGGATGTGGCTCGGCACGTTCGAGACCGCCGAGGAGGCTGCGCGGGCCTAC
GACGAGGCCGCATGCCTCCTCCGGGGCTCAAACACGCGCACCAACTTCGCAACGCAGGCT
GCACCAGACTCGCCGCTCGCGTCGAGGATCCGCACCATCCTCACCCACAAGAAGCTCAAG
AAGAGCATGCCCCAGCCTACCATCACCTTCAGCACCGCAGTATATCACCATGCTCGTAGC
ACTGTCCCTGCTGCTGCAACCAGCACAAGCACCAGTGGTGTCAGCCCCAGCAGAAGCAAC
AGCTCAAGCCTTAATTTTGCTACAAACCTCTCTAATTTTGCTATGAGTGGAGGTGAAGAA
TTGCAGCTGGCTTCTTCACAACAACAATATGATCAGTCATGGGCACTCAACACCAGCCTA
CTACCGATTGGGGATGGATGCGACATGTCAGGCAGCAATGCTTGCCCAGTGGCCTCAGAC
CAGGATAAGATGAAGGCAGAGAAGCAAGGCTCCCATGGTATGAATGGCATCCAGGAGCAG
GAAACCTTTGATATGGGTAATGATCTGTGCGACTCCTTGTGGGATCTGCCCCCTATTTGT
CAACTGTCCTGCAAGTATTAATGTATTAGACAAACAAAACTAGACATCCCCATACCAAGA
TTCCTCCTTTTTGAGTCCATCTTCTGCTCTATGAGCCAATTCCATACAAAACGTATGAGG
AACGATGGCCAGCAAGCAGAGTAATGTGACGG