Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0202100-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:5500383:5506489:-1 gene:Os07g0202100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 52B description:Similar to ATP-dependent RNA helicase ded1. (Os07t0202100-01);Similar to DEAD-box ATP-dependent RNA helicase 52B. (Os07t0202100-02)
Sequence	ATGCGATCTTCATGGGCTGACTCAGCTGCGAACGCCGAGGAATCGGCGCCCGCGGCTGCT GCTAACCACGGCAACTCGCGCCTCCCGCGCAGCTCATACGTTCCCCCGCACCTCCGCGGC CAAGCGGCTCCTGCAGCGCCGGCGCAAGCTGGCGCGCTGCCCTCGGCCGCCGCCGCCGCG CAGCCTTCTGTTGGCCAGCCTGGTGTGGTTGGTGGCCCTCGCTGGGCGGGCATTGTGAAT GGTGGTGGTGGTGGTGGTGGTGGGAGCGTAGGTGGTTCTCGCCAGGGCTTTGGTGCTGGT GGCCGCGGTGGAGGAGGTGGTGGTGGCGGTGGTGCATGGAACTCCCGCCCTGGGGGTTGG GACCGAAGAGACCGTGAACCGGATCCTTTTGCCAATAGTGAGGCTGCGGAAGTTGACTTT GAGGGCGAGAACACTGGCATCAATTTTGAAGCCTATGAAGACATCCCTGTTGAGACAAGT GGCCATGATGTGCCCCCACCAGCCAATACATTTGCGGAGATTGATTTGGGTGACGCGCTG AATGAGAATATCAGAAGGTGCAAATATGTGAAGCCGACACCAGTGCAGCGTTATGCCATC CCAATCTCCATTGCAGGACGGGATCTCATGGCCTGTGCACAAACAGGATCTGGAAAGACA GCAGCCTTTTGTTTCCCTATCATCAGTGGAATCATGAGGTCAAGGCCACCCCCCAGGTCA CGGGGTTCCAGGACCGCATATCCTCTTGCACTAATCCTATCTCCCACTCGTGAGCTTTCG GTCCAAATCCATGAAGAAGCAAGGAAGTTTGCATACCAGACTGGTGTTAAAGTGGTCGTT GCATACGGAGGAGCGCCAATTACTCAGCAGCTGAGGGAGTTAGAAAGAGGTGTTGAAATC CTTGTGGCAACTCCTGGCCGCTTAATGGATTTGTTGGAGAGGGCTAGAGTCTCACTGCAG ATGATAAAGTATTTAGCTCTTGATGAAGCTGATCGAATGCTTGATATGGGATTTGAGCCC CAGATACGTAAAATAGTTGAGCAGATGGACATGCCTCCACGTGGAGAGAGGCAGACGATG TTGTTTAGTGCTACATTTCCAAAGGAGATACAGAGAATGGCTTCAGATTTCCTCGCCGAT TACATATTTCTTGCTGTCGGGAGAGTTGGTTCAAGTACTGATTTAATTGTCCAGAGGGTT GAGTTTGTCCTTGATGCTGACAAAAGAAGCTACCTCATGGACCTTCTTCATGCACAAAGG GCAAATGGTACACATGGGAAGCAAGCTCTTACCTTGGTCTTTGTGGAGACAAAGAGGGGA GCTGATGCCCTGGAGAACTGGCTTTATAACAATGGGTTCCCAGCAACTAGCATTCATGGA GACAGAACACAACAGGAAAGAGAGTATGCCCTGAGATCCTTCAAGAGTGGAGCAACTCCC ATCCTCGTGGCAACTGATGTTGCTGCTCGTGGACTGGATATACCTCATGTTGCCCACGTC ATTAATTTTGACCTCCCAAATGATATAGACGACTATGTCCATCGGATAGGAAGGACAGGG CGTGCAGGGAAATCTGGTCTGGCAACTGCATTTTTCAACGAGAGCAACACCCCACTGGCA AGGCCGCTGAGTGAGCTCATGCAGGAGGCTAACCAGGAGGTTCCTCAATGGCTTGAGAGG TATGCTGCCCGTTCATCGTTTGGAGGCGGCGGCGGGAGAAACCGCAGGTCAGGTGGTGGT GCTAGGTTTGGTGGCCGGGACTTCCGACGAGACAGAGGCAGTGGTGGTGGAGGGTATGGT GGTGGAGGTGGAGGTTATGGAGGTGGCGGATATGGTGGTGGTGGCGGTGGAGGCGGCTAT GGTGGCGGTAGCAGCTACGGAGGTGGCGGGCAAGGTTTTTCTAGTGCTTGGGACTGA

Peptide Sequence

PEP ID	Os07t0202100-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:5500383:5506489:-1 gene:Os07g0202100 transcript:Os07t0202100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 52B description:Similar to ATP-dependent RNA helicase ded1. (Os07t0202100-01);Similar to DEAD-box ATP-dependent RNA helicase 52B. (Os07t0202100-02)
Sequence	MRSSWADSAANAEESAPAAAANHGNSRLPRSSYVPPHLRGQAAPAAPAQAGALPSAAAAA QPSVGQPGVVGGPRWAGIVNGGGGGGGGSVGGSRQGFGAGGRGGGGGGGGGAWNSRPGGW DRRDREPDPFANSEAAEVDFEGENTGINFEAYEDIPVETSGHDVPPPANTFAEIDLGDAL NENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRS RGSRTAYPLALILSPTRELSVQIHEEARKFAYQTGVKVVVAYGGAPITQQLRELERGVEI LVATPGRLMDLLERARVSLQMIKYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGERQTM LFSATFPKEIQRMASDFLADYIFLAVGRVGSSTDLIVQRVEFVLDADKRSYLMDLLHAQR ANGTHGKQALTLVFVETKRGADALENWLYNNGFPATSIHGDRTQQEREYALRSFKSGATP ILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNTPLA RPLSELMQEANQEVPQWLERYAARSSFGGGGGRNRRSGGGARFGGRDFRRDRGSGGGGYG GGGGGYGGGGYGGGGGGGGYGGGSSYGGGGQGFSSAWD

Transcript Sequence

Transcript ID	Os07t0202100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:5500383:5506489:-1 gene:Os07g0202100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 52B description:Similar to ATP-dependent RNA helicase ded1. (Os07t0202100-01);Similar to DEAD-box ATP-dependent RNA helicase 52B. (Os07t0202100-02)
Sequence	CGTCTCGTCTCCCCTTCCCTTCCCCCCCGCCGCCTTCGCCGCCGACGCGCCGATCTCCAC CACCCCCCACCTCGCTCCGCCGCCGCCGCCGCCTCTTGCTACTGCCTCCCTCCCTCCGCC GCATACTCCCCTCGCCCTCCGACCACTCCCCCTCCTCTACTCCCCCGTCTCCTCCTCGCC ACTTCGCCACCCCGCCGCCTTCGCCGATCCCCTCACCCATCCCGCCGCGAGCTGAGCAGA GGAGCCGTGGGTTTCCGTCGTCCTGCTGCTTCCGCCTCCGTGATCGAGTGGTGCGTTCTC ATCAACGGGCCTTGTGCGCTAAATTATGCGATCTTCATGGGCTGACTCAGCTGCGAACGC CGAGGAATCGGCGCCCGCGGCTGCTGCTAACCACGGCAACTCGCGCCTCCCGCGCAGCTC ATACGTTCCCCCGCACCTCCGCGGCCAAGCGGCTCCTGCAGCGCCGGCGCAAGCTGGCGC GCTGCCCTCGGCCGCCGCCGCCGCGCAGCCTTCTGTTGGCCAGCCTGGTGTGGTTGGTGG CCCTCGCTGGGCGGGCATTGTGAATGGTGGTGGTGGTGGTGGTGGTGGGAGCGTAGGTGG TTCTCGCCAGGGCTTTGGTGCTGGTGGCCGCGGTGGAGGAGGTGGTGGTGGCGGTGGTGC ATGGAACTCCCGCCCTGGGGGTTGGGACCGAAGAGACCGTGAACCGGATCCTTTTGCCAA TAGTGAGGCTGCGGAAGTTGACTTTGAGGGCGAGAACACTGGCATCAATTTTGAAGCCTA TGAAGACATCCCTGTTGAGACAAGTGGCCATGATGTGCCCCCACCAGCCAATACATTTGC GGAGATTGATTTGGGTGACGCGCTGAATGAGAATATCAGAAGGTGCAAATATGTGAAGCC GACACCAGTGCAGCGTTATGCCATCCCAATCTCCATTGCAGGACGGGATCTCATGGCCTG TGCACAAACAGGATCTGGAAAGACAGCAGCCTTTTGTTTCCCTATCATCAGTGGAATCAT GAGGTCAAGGCCACCCCCCAGGTCACGGGGTTCCAGGACCGCATATCCTCTTGCACTAAT CCTATCTCCCACTCGTGAGCTTTCGGTCCAAATCCATGAAGAAGCAAGGAAGTTTGCATA CCAGACTGGTGTTAAAGTGGTCGTTGCATACGGAGGAGCGCCAATTACTCAGCAGCTGAG GGAGTTAGAAAGAGGTGTTGAAATCCTTGTGGCAACTCCTGGCCGCTTAATGGATTTGTT GGAGAGGGCTAGAGTCTCACTGCAGATGATAAAGTATTTAGCTCTTGATGAAGCTGATCG AATGCTTGATATGGGATTTGAGCCCCAGATACGTAAAATAGTTGAGCAGATGGACATGCC TCCACGTGGAGAGAGGCAGACGATGTTGTTTAGTGCTACATTTCCAAAGGAGATACAGAG AATGGCTTCAGATTTCCTCGCCGATTACATATTTCTTGCTGTCGGGAGAGTTGGTTCAAG TACTGATTTAATTGTCCAGAGGGTTGAGTTTGTCCTTGATGCTGACAAAAGAAGCTACCT CATGGACCTTCTTCATGCACAAAGGGCAAATGGTACACATGGGAAGCAAGCTCTTACCTT GGTCTTTGTGGAGACAAAGAGGGGAGCTGATGCCCTGGAGAACTGGCTTTATAACAATGG GTTCCCAGCAACTAGCATTCATGGAGACAGAACACAACAGGAAAGAGAGTATGCCCTGAG ATCCTTCAAGAGTGGAGCAACTCCCATCCTCGTGGCAACTGATGTTGCTGCTCGTGGACT GGATATACCTCATGTTGCCCACGTCATTAATTTTGACCTCCCAAATGATATAGACGACTA TGTCCATCGGATAGGAAGGACAGGGCGTGCAGGGAAATCTGGTCTGGCAACTGCATTTTT CAACGAGAGCAACACCCCACTGGCAAGGCCGCTGAGTGAGCTCATGCAGGAGGCTAACCA GGAGGTTCCTCAATGGCTTGAGAGGTATGCTGCCCGTTCATCGTTTGGAGGCGGCGGCGG GAGAAACCGCAGGTCAGGTGGTGGTGCTAGGTTTGGTGGCCGGGACTTCCGACGAGACAG AGGCAGTGGTGGTGGAGGGTATGGTGGTGGAGGTGGAGGTTATGGAGGTGGCGGATATGG TGGTGGTGGCGGTGGAGGCGGCTATGGTGGCGGTAGCAGCTACGGAGGTGGCGGGCAAGG TTTTTCTAGTGCTTGGGACTGATCCTGATCCAGAGCTGTCATGAGAACTGAAATTTGAAA CAATCGTGCTCTATTGGCCTCCCTTTGGTGACATGGAAATTTGAAATTTGAGTTGCCTTT TGATGATAGTATGGTGTGGCATCGCCTTCATCATTGGCGGTTCTCTCAGTCTGGTGTTGA TTTTTCCTTTTTTGTGTACTGTACTAGGGATTGCTTGTGTTTTTTTATCTGCGAATTGTG AACTCATCTTTTAATGGGGCCTCTTTTATTAATTTCTCCTTTCTACTGTT