Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0200700-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:5440357:5445784:1 gene:Os07g0200700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Squalene synthase (EC 2.5.1.21). (Os07t0200700-01)
Sequence	ATGGGGGTGGTGGGGGCGTTGCTGGGACCGGAGGCGGAGGCGCTGGTGAGGCTGCGGGCG GCGGCGTGGCGGCTGCGGAGGGAGGTCGCCGCCGCCACCGACGACGACGAGCACTGGGCC TTCGCCTACTCCATGCTGCACCGCGTCTCCCGCAGCTTCGCCATCGTCATCCAGCAGCTC GGCCCCGACCTCCGCAATGCCGTGTGCGTCTTCTACCTCGTGCTTCGGGCGCTCGACACC GTCGAAGATGATACTAGCATCCCTACTGAGATTAAGGTGCCCATTCTTCAGGAATTCCAC CGTCATATCTATAACCGGGATTGGCATTTCTCATGTGGAACAAAGGACTGCAAGATTCTG ATGGATAAATTCCACTATGTTTTGACAGCTTTCTTGGAGCTTGGTTCAGGATACCAAGAG GCAATTGAAGAAATTACCAGGAGAATGGGTGCAGGAATGGCAAAGTTTATATGCAAGGAG GTTGAAACTGTTGATGATTATGATGAGTACTGTCACTATGTGGCAGGGCTAGTCGGCATT GGACTTTCAAGGCTCTTTCATGCTGCTGGGTTAGAAGATCTTGCTCCCGAATCGCTTTCT AATTCAATGGGTTTATTTTTGCAGAAAGTCAATATTACTCGGGATTACCTGGAGGACATA AATGAGATACCAAAATCACGCATGTTCTGGCCACGAGAAATATGGAGTAAATATGTTGAC AAACTTGAGGATCTCAAATACGAAAATAATTCAGTGAAGGCAGTAAAATGCTTGAATGAG ATGGTGACTAATGGTTTAATACATACTGAAGATTGCCTTCGGTATATGTCTGCTCTAAAG GATATTACTATTCTCCGTTTTTGTGCAATACCCCAGGTAATGGCACTTGCAACCTATGCT CTGTGCTATAACAATGTGAATGTATTTCGAGGAGTTGTGAAGTTGAGGCGTGGGCTGACT GCACGAATAATCAATGAAACAAATTCTATGGCTGATGTGTACACTGCTTTCTATGAATTC TCTTCACTGCTTGCAGAAAAGATTGATGATAATGATCCAAATGCGTCGCTTACACGGAAA CGTGTGAATGCAATAAAGGAGACCTGCAAATCATCCGGTTTGCTGAAGATAAGGGGATAT GACTTGGATAGGCCAAAAAGGAACCCTGCTATGATCATGATGCTACTGCTGCTCTTGGTA GCTATTTTCTTGGGAGCTCTGTATAGGAGGTGA

Peptide Sequence

PEP ID	Os07t0200700-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:5440357:5445784:1 gene:Os07g0200700 transcript:Os07t0200700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Squalene synthase (EC 2.5.1.21). (Os07t0200700-01)
Sequence	MGVVGALLGPEAEALVRLRAAAWRLRREVAAATDDDEHWAFAYSMLHRVSRSFAIVIQQL GPDLRNAVCVFYLVLRALDTVEDDTSIPTEIKVPILQEFHRHIYNRDWHFSCGTKDCKIL MDKFHYVLTAFLELGSGYQEAIEEITRRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGI GLSRLFHAAGLEDLAPESLSNSMGLFLQKVNITRDYLEDINEIPKSRMFWPREIWSKYVD KLEDLKYENNSVKAVKCLNEMVTNGLIHTEDCLRYMSALKDITILRFCAIPQVMALATYA LCYNNVNVFRGVVKLRRGLTARIINETNSMADVYTAFYEFSSLLAEKIDDNDPNASLTRK RVNAIKETCKSSGLLKIRGYDLDRPKRNPAMIMMLLLLLVAIFLGALYRR

Transcript Sequence

Transcript ID	Os07t0200700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:5440357:5445784:1 gene:Os07g0200700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Squalene synthase (EC 2.5.1.21). (Os07t0200700-01)
Sequence	GACGCGACCCAGTGACCAACCCAAATCAAAGCCGACGCGCTCGAAGCCGCTAGAAGAAGA AGCAGCCATCCGAGTCGTCATCGGCGGCGGCGGCGGCGGCGGCGAGGCGATGGGGGTGGT GGGGGCGTTGCTGGGACCGGAGGCGGAGGCGCTGGTGAGGCTGCGGGCGGCGGCGTGGCG GCTGCGGAGGGAGGTCGCCGCCGCCACCGACGACGACGAGCACTGGGCCTTCGCCTACTC CATGCTGCACCGCGTCTCCCGCAGCTTCGCCATCGTCATCCAGCAGCTCGGCCCCGACCT CCGCAATGCCGTGTGCGTCTTCTACCTCGTGCTTCGGGCGCTCGACACCGTCGAAGATGA TACTAGCATCCCTACTGAGATTAAGGTGCCCATTCTTCAGGAATTCCACCGTCATATCTA TAACCGGGATTGGCATTTCTCATGTGGAACAAAGGACTGCAAGATTCTGATGGATAAATT CCACTATGTTTTGACAGCTTTCTTGGAGCTTGGTTCAGGATACCAAGAGGCAATTGAAGA AATTACCAGGAGAATGGGTGCAGGAATGGCAAAGTTTATATGCAAGGAGGTTGAAACTGT TGATGATTATGATGAGTACTGTCACTATGTGGCAGGGCTAGTCGGCATTGGACTTTCAAG GCTCTTTCATGCTGCTGGGTTAGAAGATCTTGCTCCCGAATCGCTTTCTAATTCAATGGG TTTATTTTTGCAGAAAGTCAATATTACTCGGGATTACCTGGAGGACATAAATGAGATACC AAAATCACGCATGTTCTGGCCACGAGAAATATGGAGTAAATATGTTGACAAACTTGAGGA TCTCAAATACGAAAATAATTCAGTGAAGGCAGTAAAATGCTTGAATGAGATGGTGACTAA TGGTTTAATACATACTGAAGATTGCCTTCGGTATATGTCTGCTCTAAAGGATATTACTAT TCTCCGTTTTTGTGCAATACCCCAGGTAATGGCACTTGCAACCTATGCTCTGTGCTATAA CAATGTGAATGTATTTCGAGGAGTTGTGAAGTTGAGGCGTGGGCTGACTGCACGAATAAT CAATGAAACAAATTCTATGGCTGATGTGTACACTGCTTTCTATGAATTCTCTTCACTGCT TGCAGAAAAGATTGATGATAATGATCCAAATGCGTCGCTTACACGGAAACGTGTGAATGC AATAAAGGAGACCTGCAAATCATCCGGTTTGCTGAAGATAAGGGGATATGACTTGGATAG GCCAAAAAGGAACCCTGCTATGATCATGATGCTACTGCTGCTCTTGGTAGCTATTTTCTT GGGAGCTCTGTATAGGAGGTGATCGATCCTCTGTAATGACCACCTACGTACCTTTCTATT CAACAATCTTATAACCTATATTGTTTCAGCCCATGAGACCACCATAAACATATTTTTGTA TCAGTACTGTTGTATAAGTGGAAGACTAACGTTAGATGTTGTGCTGGTTGCTAATGGTCA ATTTAGCACGTCAAGCTATATCTCTGATAGTTC