Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0200500-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:5431481:5436147:1 gene:Os07g0200500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0126B18.3 protein. (Os07t0200500-00)
Sequence

ATGGAGCCCAACATCGTCCCCGCCTACGGCTGCTCCGGTAACCTCGCCGCCGCCGCCGCC
CCGCCGGAGTACCGCTGCGTCACGCGCCTCCGCCACCGCCGCCTCCTCACCTTCCTCTGG
CTCCACGGCTTCCGATCCACCTTCGAAGCGATGGCGGAGGAGACGAAGGTGCTAGTGTCG
TTGCCGCGCCTGGAGCGCCTCATCACCAGCAGCATGTGGGACGACGCCATCGGCTACATC
TGCCGCTTCCTGCCGCCGTCCTCCGGCTCCACCGGCCAGCGCCGCCGCCGCGGGTCGCAT
CTCAGCGAGGAGGCCCAGACCCTCCTCCTCTTCCTCCACATGCACAAGTCCTTCGCCGAC
GTCGTCGCCGGCAACAAGGCCGGCGCTGCCTGGTCCGACAAGCACCGCCGCCTCTATGCC
CAATCTAGCGGCCTCTCCCCCTACAGCCACGCCGCCAGAATCCGCCGCTCCATCCTCTCC
TTCGTCTTGTCGGACCGTACCAGGGAGTCCTTGGACTGGGGGCGCGTTAGAGAGCAAGTA
GCGCAGATCGTCCGAAGCTTGCTTCATAGTACTCCAGAGCTCGTCGGATTTGTGGACTTG
CCGGGAGGCATGGTGAAGCCGCATAACGTGCTTCCCATTGGCTTCGGTTTCCGATCCAAG
CGTCACGTGAGACAGCAAAGCCACCCCCAAGCATCAACTATTGCCAAGCTCTATCTTGAG
ATGAAGAGATGTCTGCCTTCTTCAGGCCAGCCTCAGGGGTTAAGTCTGGAAGGACTGTCA
AATAAGGCGAGGAGCTGGATGGCGGATATCCTTGATTTAAGCTTACGTGCTGGCTGCAAG
CGTTCAGAACACCATGAAGGGTATCCACTCCAATCAAGTGAGAAGAAAGGTTCTCTCGTT
GCTGCAATCACACAGACTATGTTTAGCACCATAACAACTGATACTGAAAATTCTGGAATT
GCTTCAGCGACAAAAACTGGTGTTCCTGCCAGTACAGTCTTGCAAACTTTGATTGGCACC
ATGATAAGTCCTGGAAAAAAATCTGGGATCTCATCAGTGACAAATGCAGGCACTGATATG
CATTCAAGTCAAGAAGATTGCCATACTGAGAATTATTGCCAGGGTTTCACTCCAAGAAAA
CATCCAAGGGAAGAAGTGGAACCTGAGGAAGATATTAGCCCTAAAAGGCAACAAACAACT
GTGAAGTTTGGTGAAGCAAGTGTGTCATTGATTGGTGTTGCTGAAGCTGAGGGTAAAGCT
CGCTTAGTGGAACTCTCCATGTGA

Peptide Sequence

PEP ID

Os07t0200500-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:5431481:5436147:1 gene:Os07g0200500 transcript:Os07t0200500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0126B18.3 protein. (Os07t0200500-00)
Sequence

MEPNIVPAYGCSGNLAAAAAPPEYRCVTRLRHRRLLTFLWLHGFRSTFEAMAEETKVLVS
LPRLERLITSSMWDDAIGYICRFLPPSSGSTGQRRRRGSHLSEEAQTLLLFLHMHKSFAD
VVAGNKAGAAWSDKHRRLYAQSSGLSPYSHAARIRRSILSFVLSDRTRESLDWGRVREQV
AQIVRSLLHSTPELVGFVDLPGGMVKPHNVLPIGFGFRSKRHVRQQSHPQASTIAKLYLE
MKRCLPSSGQPQGLSLEGLSNKARSWMADILDLSLRAGCKRSEHHEGYPLQSSEKKGSLV
AAITQTMFSTITTDTENSGIASATKTGVPASTVLQTLIGTMISPGKKSGISSVTNAGTDM
HSSQEDCHTENYCQGFTPRKHPREEVEPEEDISPKRQQTTVKFGEASVSLIGVAEAEGKA
RLVELSM

Transcript Sequence

Transcript ID

Os07t0200500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:5431481:5436147:1 gene:Os07g0200500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0126B18.3 protein. (Os07t0200500-00)
Sequence

GCCGTGCAGTACAGAAGAGAAGAGGAGAGAGGAGGGGTCTCGAAATCAAAGTTGGGAGAC
CGAGCGCGCTCGATGGAGCCCAACATCGTCCCCGCCTACGGCTGCTCCGGTAACCTCGCC
GCCGCCGCCGCCCCGCCGGAGTACCGCTGCGTCACGCGCCTCCGCCACCGCCGCCTCCTC
ACCTTCCTCTGGCTCCACGGCTTCCGATCCACCTTCGAAGCGATGGCGGAGGAGACGAAG
GTGCTAGTGTCGTTGCCGCGCCTGGAGCGCCTCATCACCAGCAGCATGTGGGACGACGCC
ATCGGCTACATCTGCCGCTTCCTGCCGCCGTCCTCCGGCTCCACCGGCCAGCGCCGCCGC
CGCGGGTCGCATCTCAGCGAGGAGGCCCAGACCCTCCTCCTCTTCCTCCACATGCACAAG
TCCTTCGCCGACGTCGTCGCCGGCAACAAGGCCGGCGCTGCCTGGTCCGACAAGCACCGC
CGCCTCTATGCCCAATCTAGCGGCCTCTCCCCCTACAGCCACGCCGCCAGAATCCGCCGC
TCCATCCTCTCCTTCGTCTTGTCGGACCGTACCAGGGAGTCCTTGGACTGGGGGCGCGTT
AGAGAGCAAGTAGCGCAGATCGTCCGAAGCTTGCTTCATAGTACTCCAGAGCTCGTCGGA
TTTGTGGACTTGCCGGGAGGCATGGTGAAGCCGCATAACGTGCTTCCCATTGGCTTCGGT
TTCCGATCCAAGCGTCACGTGAGACAGCAAAGCCACCCCCAAGCATCAACTATTGCCAAG
CTCTATCTTGAGATGAAGAGATGTCTGCCTTCTTCAGGCCAGCCTCAGGGGTTAAGTCTG
GAAGGACTGTCAAATAAGGCGAGGAGCTGGATGGCGGATATCCTTGATTTAAGCTTACGT
GCTGGCTGCAAGCGTTCAGAACACCATGAAGGGTATCCACTCCAATCAAGTGAGAAGAAA
GGTTCTCTCGTTGCTGCAATCACACAGACTATGTTTAGCACCATAACAACTGATACTGAA
AATTCTGGAATTGCTTCAGCGACAAAAACTGGTGTTCCTGCCAGTACAGTCTTGCAAACT
TTGATTGGCACCATGATAAGTCCTGGAAAAAAATCTGGGATCTCATCAGTGACAAATGCA
GGCACTGATATGCATTCAAGTCAAGAAGATTGCCATACTGAGAATTATTGCCAGGGTTTC
ACTCCAAGAAAACATCCAAGGGAAGAAGTGGAACCTGAGGAAGATATTAGCCCTAAAAGG
CAACAAACAACTGTGAAGTTTGGTGAAGCAAGTGTGTCATTGATTGGTGTTGCTGAAGCT
GAGGGTAAAGCTCGCTTAGTGGAACTCTCCATGTGAATTCGGATGAGCTGCAGCATTGGG
GCTGTGCTGGGTGCTTCCTGTGCGAAAAGTAGCTAGACAGTCGATGAAGTACTGCTGATT
CTGTTGGAACATTAGGTGGTTTTAATTTGCTGCTACTACTACCTAGCTGAAGCTTTCATA
TATCCTAAAAATAATTATGTTACCCAGCAACTCTAGCTGTTTCTCTAGCTAAGAACTATT
CTACTATTAAGTAGACTTGGTCAGAGTAAACCACTCTAAGATGAGCGCACGTGCAGTATG
TTTGCTTAACTCGTGTAAGACTTATATGTGGCATACCTATATTGTCATTAGTTCCCTATC