Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0200000-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:5418768:5424207:-1 gene:Os07g0200000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vps51/Vps67 domain containing protein. (Os07t0200000-01);Similar to predicted protein. (Os07t0200000-02)
Sequence	CAAAGGCTTCAATGTAATATGCAAACTATACATCCATCTAGCACTTCGTATGGTGGGGCG TACACTGCAGCACTTGCTCAGCAAGTCTTTTCAGTGGTAGCTCAGGCACTCAGTGACTCT GTAGAAGTTTTTGGTGATGAGTCATGTTATGCATCTGAACTGGTTACATGGGCTACGAAG CAGGTTATGTCCTTTGCACTCTTGGTAAAGAGGCATGTGTTGTCCTCTTGTGCAGCTGCT GGAGGTTTGAGAGCAGCTGCCGAATGTGTTCAGATATCACTTGGTCATTGCTCCTTGTTG GAAGCTCGTGGTCTGTCTGTTGCAGCTGTTCTTCTGAGGCAATTCAGGCCCAGTCTAGAG CAAGCATTATATTCAAACATCAGAAGAATTGAAGAGAGTACCGCTGCACTAGCTGCAGCT GATGACTGGATTCTCACATATCCCCCAACTGGCATTCGTCCTTTAGCTAGATCATCTGCT GCTAATTTGGCTCTTCAGCCAAAGCTCTCCAACAGTGCTCATCGTTTTAACTCGATGGTT CAGGAGTTCTTTGAAGATGTTGCGCCGCTGCTTAGCTTGCAATTAGGTGGTTCTACAATG GATGACATAACTAAAATTTTCAATTCATATGTCAATTTGCTCATAAGTGCTTTACCTGGG TCAATGGAAGATGAAGCTAACATAGATGGTTTAGGAAATAAGATTGTTAGAATGGCAGAG TCTGAAGAACAGCAACTGGCTTTATTAGCCAATGCGTCTTTGCTAGCTGAGGAGTTGCTA CCTAGAGCAGCTATGAAGCTATCATCAATGAACCATTCTAGTATGGATGATCTGCGTAAA AGAGGCTCAGATAAACAGAACCGTATGCCTGAGCAACGTGAATGGAAACGGAAATTACAA CGCATGGTGGACAGATTAAGGGATAGTTTCTGCAGGCAGCATGCTCTTGAACTTATATTT ACAGATGAAGGTGAGACCCATCTCAGTGCAGACATGTATATTAGCATGGACAATACTGTT GAAGAGCCAGAATGGGCCCCATCTCTTATTTTCCAGGAGCTGTATGCAAAGCTAAATAGG ATGGCCAGTATTGCGGCAGATATGTTTGTCGGCAGAGAAAGATTTGCTACTCTGCTAATG ATGCGACTCACTGAGACAGTCATACTATGGCTCTCAGAGGATCAAGCCTTCTGGGAAGAG ATTGAACAGGGACCGAAGCCTTTGGGTCCCCTTGGCCTTCAGCAATTCTACCTGGATATG CAATTTGTAATTATCTTTGGACAAGGTCGATTCTTGTCTAGGCACGTCCATCAAGTCATA TTGGATATTATTGATAGAGCAATGGCTGCATTTTCAGCTACTGGAATGAACCCTGACAGT GTCCTCCCGGGTGACGATTGGTTCATGGATGTTTCTCAGGAGGTTGTCAGCATGATTAGT GGAAAGGGTAGAGCTGCCAATGGAGACAGGGAGATAAACAGCCCTACTGCCTCAGTCTCA GCGCATTCCATGTCATCTTTCAGATCCCATGGCAGCTCCTAG

Peptide Sequence

PEP ID	Os07t0200000-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:5418768:5424207:-1 gene:Os07g0200000 transcript:Os07t0200000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vps51/Vps67 domain containing protein. (Os07t0200000-01);Similar to predicted protein. (Os07t0200000-02)
Sequence	QRLQCNMQTIHPSSTSYGGAYTAALAQQVFSVVAQALSDSVEVFGDESCYASELVTWATK QVMSFALLVKRHVLSSCAAAGGLRAAAECVQISLGHCSLLEARGLSVAAVLLRQFRPSLE QALYSNIRRIEESTAALAAADDWILTYPPTGIRPLARSSAANLALQPKLSNSAHRFNSMV QEFFEDVAPLLSLQLGGSTMDDITKIFNSYVNLLISALPGSMEDEANIDGLGNKIVRMAE SEEQQLALLANASLLAEELLPRAAMKLSSMNHSSMDDLRKRGSDKQNRMPEQREWKRKLQ RMVDRLRDSFCRQHALELIFTDEGETHLSADMYISMDNTVEEPEWAPSLIFQELYAKLNR MASIAADMFVGRERFATLLMMRLTETVILWLSEDQAFWEEIEQGPKPLGPLGLQQFYLDM QFVIIFGQGRFLSRHVHQVILDIIDRAMAAFSATGMNPDSVLPGDDWFMDVSQEVVSMIS GKGRAANGDREINSPTASVSAHSMSSFRSHGSS

Transcript Sequence

Transcript ID	Os07t0200000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:5418768:5424207:-1 gene:Os07g0200000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vps51/Vps67 domain containing protein. (Os07t0200000-01);Similar to predicted protein. (Os07t0200000-02)
Sequence	ATCAAAGGCTTCAATGTAATATGCAAACTATACATCCATCTAGCACTTCGTATGGTGGGG CGTACACTGCAGCACTTGCTCAGCAAGTCTTTTCAGTGGTAGCTCAGGCACTCAGTGACT CTGTAGAAGTTTTTGGTGATGAGTCATGTTATGCATCTGAACTGGTTACATGGGCTACGA AGCAGGTTATGTCCTTTGCACTCTTGGTAAAGAGGCATGTGTTGTCCTCTTGTGCAGCTG CTGGAGGTTTGAGAGCAGCTGCCGAATGTGTTCAGATATCACTTGGTCATTGCTCCTTGT TGGAAGCTCGTGGTCTGTCTGTTGCAGCTGTTCTTCTGAGGCAATTCAGGCCCAGTCTAG AGCAAGCATTATATTCAAACATCAGAAGAATTGAAGAGAGTACCGCTGCACTAGCTGCAG CTGATGACTGGATTCTCACATATCCCCCAACTGGCATTCGTCCTTTAGCTAGATCATCTG CTGCTAATTTGGCTCTTCAGCCAAAGCTCTCCAACAGTGCTCATCGTTTTAACTCGATGG TTCAGGAGTTCTTTGAAGATGTTGCGCCGCTGCTTAGCTTGCAATTAGGTGGTTCTACAA TGGATGACATAACTAAAATTTTCAATTCATATGTCAATTTGCTCATAAGTGCTTTACCTG GGTCAATGGAAGATGAAGCTAACATAGATGGTTTAGGAAATAAGATTGTTAGAATGGCAG AGTCTGAAGAACAGCAACTGGCTTTATTAGCCAATGCGTCTTTGCTAGCTGAGGAGTTGC TACCTAGAGCAGCTATGAAGCTATCATCAATGAACCATTCTAGTATGGATGATCTGCGTA AAAGAGGCTCAGATAAACAGAACCGTATGCCTGAGCAACGTGAATGGAAACGGAAATTAC AACGCATGGTGGACAGATTAAGGGATAGTTTCTGCAGGCAGCATGCTCTTGAACTTATAT TTACAGATGAAGGTGAGACCCATCTCAGTGCAGACATGTATATTAGCATGGACAATACTG TTGAAGAGCCAGAATGGGCCCCATCTCTTATTTTCCAGGAGCTGTATGCAAAGCTAAATA GGATGGCCAGTATTGCGGCAGATATGTTTGTCGGCAGAGAAAGATTTGCTACTCTGCTAA TGATGCGACTCACTGAGACAGTCATACTATGGCTCTCAGAGGATCAAGCCTTCTGGGAAG AGATTGAACAGGGACCGAAGCCTTTGGGTCCCCTTGGCCTTCAGCAATTCTACCTGGATA TGCAATTTGTAATTATCTTTGGACAAGGTCGATTCTTGTCTAGGCACGTCCATCAAGTCA TATTGGATATTATTGATAGAGCAATGGCTGCATTTTCAGCTACTGGAATGAACCCTGACA GTGTCCTCCCGGGTGACGATTGGTTCATGGATGTTTCTCAGGAGGTTGTCAGCATGATTA GTGGAAAGGGTAGAGCTGCCAATGGAGACAGGGAGATAAACAGCCCTACTGCCTCAGTCT CAGCGCATTCCATGTCATCTTTCAGATCCCATGGCAGCTCCTAGCTTGTAAGCTATACTT TTTGTAGGCAGATCATCATTGTATAATAAGCAATAGTGCATTCTTTCTTTCTTTTTCTCC CACATTTCTCAGTTTTCTCTGTCTATTTCTTTTGTTCTATTCATTTCCTTCTGTTGTGCT AGTACAGGTGGATAACTGTTTGACGTAGGAAAAAAAATCTTGAATTATTTTCTTCCCTGA GCTAAGGCCTGTAAGTGTTGCTTACTTGCATGGCCAGTATATGTCGCGAGCTTTGTATCA TTCTTTCAGATGTTTTTTTTATGTCACCTGGCACATCGCATTCATGAATTCAGGATTCGT TACTTTCGAT