Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0196200-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:5216029:5217014:-1 gene:Os07g0196200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3252 domain containing protein. (Os07t0196200-01)
Sequence

ATGGCGCCCACCACCCCCGCCTCCTTCCTCCGCCCGCCGCCGCTGCCCCACCACCACCAC
CCCCGCATCGTCCGCCTGCCCCCTCCCTCGGCGACCTTCCGCGTCGCTGACCTCCTCGGC
GGCCGGGGTCTCTGCAACGGCGAGGTCGGCATCCGCAAGGAGCTCGCCTCCGACTCCCCC
GCCGCGCCGCCATCCACCACCACTTCTTCCGACGAGCCCGCGGAGTCGCCACCGCCGCCG
CCGGCTGCGTCCGGGGTGGACCCGGACGCGTTCGACAAGGAGATGATGGGCCTCACCGGC
GGATTCCCCGGCGGCGAGGTCGGCCTCAAGGACTTCGTCGCCAAGAACCCGCCTCCCCCC
AAGCCGGCGCACAGGAAAGGTCTCGCCGCCGCCGCCACGGTGGAGCGGCCGAGGGCGCCG
GAGCTGCCGCTGTTCCTCCCCGGGATGGTGGTGCTCGTCAAGAACCCCAACAACGCCTAC
CACATGTACTGCGGCATCGTGCAGCGCGTCACCGACGGCAAGGTCGGGGTGCTGTTCGAG
GGGGGGATCTGGGACAGGCTCATCACCTTCGATCTCGACGAGCTCGAGGGGAGGGAGAAG
GGCCCGCCCATGGTGAACCCTAAGTCCGTGCTGCTCGAGTCCCTCGCCGCGGAGATGGAG
GACGATGTGGCCAAGGAGGAGGAGGGAGAGGAGGCCAAGAAGAAGAAGGAGGAGGAAGGC
ACCGCCGCCGCGGCTTGA

Peptide Sequence

PEP ID

Os07t0196200-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:5216029:5217014:-1 gene:Os07g0196200 transcript:Os07t0196200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3252 domain containing protein. (Os07t0196200-01)
Sequence

MAPTTPASFLRPPPLPHHHHPRIVRLPPPSATFRVADLLGGRGLCNGEVGIRKELASDSP
AAPPSTTTSSDEPAESPPPPPAASGVDPDAFDKEMMGLTGGFPGGEVGLKDFVAKNPPPP
KPAHRKGLAAAATVERPRAPELPLFLPGMVVLVKNPNNAYHMYCGIVQRVTDGKVGVLFE
GGIWDRLITFDLDELEGREKGPPMVNPKSVLLESLAAEMEDDVAKEEEGEEAKKKKEEEG
TAAAA

Transcript Sequence

Transcript ID

Os07t0196200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:5216029:5217014:-1 gene:Os07g0196200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3252 domain containing protein. (Os07t0196200-01)
Sequence

AAAGGCTTCGTCACTTCCACACATCCTCTGCTCCGCTCTGCTCCACCAATGGCGCCCACC
ACCCCCGCCTCCTTCCTCCGCCCGCCGCCGCTGCCCCACCACCACCACCCCCGCATCGTC
CGCCTGCCCCCTCCCTCGGCGACCTTCCGCGTCGCTGACCTCCTCGGCGGCCGGGGTCTC
TGCAACGGCGAGGTCGGCATCCGCAAGGAGCTCGCCTCCGACTCCCCCGCCGCGCCGCCA
TCCACCACCACTTCTTCCGACGAGCCCGCGGAGTCGCCACCGCCGCCGCCGGCTGCGTCC
GGGGTGGACCCGGACGCGTTCGACAAGGAGATGATGGGCCTCACCGGCGGATTCCCCGGC
GGCGAGGTCGGCCTCAAGGACTTCGTCGCCAAGAACCCGCCTCCCCCCAAGCCGGCGCAC
AGGAAAGGTCTCGCCGCCGCCGCCACGGTGGAGCGGCCGAGGGCGCCGGAGCTGCCGCTG
TTCCTCCCCGGGATGGTGGTGCTCGTCAAGAACCCCAACAACGCCTACCACATGTACTGC
GGCATCGTGCAGCGCGTCACCGACGGCAAGGTCGGGGTGCTGTTCGAGGGGGGGATCTGG
GACAGGCTCATCACCTTCGATCTCGACGAGCTCGAGGGGAGGGAGAAGGGCCCGCCCATG
GTGAACCCTAAGTCCGTGCTGCTCGAGTCCCTCGCCGCGGAGATGGAGGACGATGTGGCC
AAGGAGGAGGAGGGAGAGGAGGCCAAGAAGAAGAAGGAGGAGGAAGGCACCGCCGCCGCG
GCTTGACCACCATTGCTGCTTCTGCTTCTTCTTGTATGTATACAGCTATCTATATTTTCT
TAGATGATGGAAGTGAAAGGGGTATATATATATATATTATCTATTCGATGAGTAATTTCG
AAGTGAGTAAATGTGTTGTTGTTAATTGCTATATGTACAGTTGGAATCTTAGTGTGAATT
GGCACTATGAAACAAACGATTCGGAG