Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0194100-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:5102510:5107297:1 gene:Os07g0194100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSK2 (Fragment). (Os07t0194100-01)
Sequence	ATGCAGGGCGGCGGCGGCGCGGCGTCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGCAG CAGCACCGGGAGCTGCTCGAGCGGTACGAGCTGGTGCGGGTGCGGGGGCGCGGTAGCTTC GCGCAGGTGTGGGAGGCTCGCCACCGCCGCACCGGCCTCAGCGTCGCCGTCAAGATCCTC AACCTCGCCGGACTTCTCGCCAGCGGCATCCCCATCCGCAAAGTGGAGAGGGAGATCGCG GTGATGAGGCTGCTGAACCACCCGCACATCGTGCGGTTCCACGAGGCGATCGCCGGCGGC GACGGCGGCGGCCACGTGTACATCGTGATGGAGCTCGCGACGCAGGGGCAGCTCTACGAT TACGTCACCCAGCTCGGCCGCCTCCGCGAGGATGACGCTCGCAGGATCTTCCAGCAGATT ATATCAGGCGCCGAATACTGCCACCACAACATGGTCGTCCACCGTGACCTGAAACTGGAG AACATCCTGATGGATTCAGAGATGAACGTCAAGATCGTCGACTTCGGTTTCAGCAAGTTC TTCAGGCACAACAAGGTGCTCAGCGCGTCATGCGGAAGCCGAGAATATGCCGCTCCCGAG CTACTCGCGGGTAGAAAATATGTTGGTCCACCTGTGGATGTTTGGAGCTGTGGAGTAATC CTTTACATCCTCTTCTGTGGACGCTTGCCCTTTGACAGCGCCGATGTATCAGAGCTGCAC AGGATCATCAAGAGAGGAGAGTTCAGTATCCCACCGTACGTGCCTGACGACGCGAGGGAT CTCATCTCCAGCATGCTGATCGTGAGACCTGACAAGCGCCTCACCATCACCGAGGTCAGG ACGCACCGTTGGCTGCAGCACTCCATCCCTCGCTACCTCGCAATGCCTCCTCTCAACGCT CGCACACAGATCACCAGGATTGATGCTGAGACTGTCGACAAGGTAGTCGGCCATGGCTTT GAAAGGAGGTACTTGGTTGAATCACTTGAGAACAGAGTCGAAAACGAGGCGACGGTCGCC TACAACCTGATCCTCAATAAGAAGTTCGATGCCCCAACACGTTATGTTTGGACAATTGAC GTCTATCAAGAAGCTGGACAAAGTAACACCACGGGAGCAGCAGAAGCAACTGGCAGCAGT GCTGCCGGAGAGCCGCCGGTCGCCGTCGCCGGAGAAGACGACGGACGCAACAACGGATGG GCGCTGGGAGGGGTGGAGTTCCACGAGTGCCCCCGCGAGGCGATGCGCGCCATCGCGGCG GCGCTGCGCGAGACCGGCGTCGTCTACGCGCACGACGACGACGACCGCGGCCGCTACGGC AAGCTGCTCTGCGCACGCTTCGCCGGCGCCGCCGGCGTCCGCCGCATCATCCGCAGCTAC CTCGCCGCCACCGACGACGCGCCCTCCTCTTCCTCCTCCGCCGGTGGTGGCAGTGGCAGA GGTGAGGCTGGCCATGGCGGTGGAGCTCCCGTCGATGATGCTGTCCTCGAGAGCTTGTCT GCGGCTGTGTTCTTTGAAATTCAGCTGTACAAGTCAGAAGGGGAAGGGAATTACCTGATG GATCTGAAGAGGCTTTCTGGCCCACAGCTTCAATACCTCAACATATGCTCAGAGTTAAGC TCCAAGTTGAGAGCAATTAACTGA

Peptide Sequence

PEP ID	Os07t0194100-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:5102510:5107297:1 gene:Os07g0194100 transcript:Os07t0194100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSK2 (Fragment). (Os07t0194100-01)
Sequence	MQGGGGAASAAAAAAAAATQQHRELLERYELVRVRGRGSFAQVWEARHRRTGLSVAVKIL NLAGLLASGIPIRKVEREIAVMRLLNHPHIVRFHEAIAGGDGGGHVYIVMELATQGQLYD YVTQLGRLREDDARRIFQQIISGAEYCHHNMVVHRDLKLENILMDSEMNVKIVDFGFSKF FRHNKVLSASCGSREYAAPELLAGRKYVGPPVDVWSCGVILYILFCGRLPFDSADVSELH RIIKRGEFSIPPYVPDDARDLISSMLIVRPDKRLTITEVRTHRWLQHSIPRYLAMPPLNA RTQITRIDAETVDKVVGHGFERRYLVESLENRVENEATVAYNLILNKKFDAPTRYVWTID VYQEAGQSNTTGAAEATGSSAAGEPPVAVAGEDDGRNNGWALGGVEFHECPREAMRAIAA ALRETGVVYAHDDDDRGRYGKLLCARFAGAAGVRRIIRSYLAATDDAPSSSSSAGGGSGR GEAGHGGGAPVDDAVLESLSAAVFFEIQLYKSEGEGNYLMDLKRLSGPQLQYLNICSELS SKLRAIN

Transcript Sequence

Transcript ID	Os07t0194100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:5102510:5107297:1 gene:Os07g0194100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSK2 (Fragment). (Os07t0194100-01)
Sequence	ACACGCTCAGTGAGGCGATCGAGGATGCAGGGCGGCGGCGGCGCGGCGTCGGCGGCGGCG GCGGCGGCGGCGGCGGCGACGCAGCAGCACCGGGAGCTGCTCGAGCGGTACGAGCTGGTG CGGGTGCGGGGGCGCGGTAGCTTCGCGCAGGTGTGGGAGGCTCGCCACCGCCGCACCGGC CTCAGCGTCGCCGTCAAGATCCTCAACCTCGCCGGACTTCTCGCCAGCGGCATCCCCATC CGCAAAGTGGAGAGGGAGATCGCGGTGATGAGGCTGCTGAACCACCCGCACATCGTGCGG TTCCACGAGGCGATCGCCGGCGGCGACGGCGGCGGCCACGTGTACATCGTGATGGAGCTC GCGACGCAGGGGCAGCTCTACGATTACGTCACCCAGCTCGGCCGCCTCCGCGAGGATGAC GCTCGCAGGATCTTCCAGCAGATTATATCAGGCGCCGAATACTGCCACCACAACATGGTC GTCCACCGTGACCTGAAACTGGAGAACATCCTGATGGATTCAGAGATGAACGTCAAGATC GTCGACTTCGGTTTCAGCAAGTTCTTCAGGCACAACAAGGTGCTCAGCGCGTCATGCGGA AGCCGAGAATATGCCGCTCCCGAGCTACTCGCGGGTAGAAAATATGTTGGTCCACCTGTG GATGTTTGGAGCTGTGGAGTAATCCTTTACATCCTCTTCTGTGGACGCTTGCCCTTTGAC AGCGCCGATGTATCAGAGCTGCACAGGATCATCAAGAGAGGAGAGTTCAGTATCCCACCG TACGTGCCTGACGACGCGAGGGATCTCATCTCCAGCATGCTGATCGTGAGACCTGACAAG CGCCTCACCATCACCGAGGTCAGGACGCACCGTTGGCTGCAGCACTCCATCCCTCGCTAC CTCGCAATGCCTCCTCTCAACGCTCGCACACAGATCACCAGGATTGATGCTGAGACTGTC GACAAGGTAGTCGGCCATGGCTTTGAAAGGAGGTACTTGGTTGAATCACTTGAGAACAGA GTCGAAAACGAGGCGACGGTCGCCTACAACCTGATCCTCAATAAGAAGTTCGATGCCCCA ACACGTTATGTTTGGACAATTGACGTCTATCAAGAAGCTGGACAAAGTAACACCACGGGA GCAGCAGAAGCAACTGGCAGCAGTGCTGCCGGAGAGCCGCCGGTCGCCGTCGCCGGAGAA GACGACGGACGCAACAACGGATGGGCGCTGGGAGGGGTGGAGTTCCACGAGTGCCCCCGC GAGGCGATGCGCGCCATCGCGGCGGCGCTGCGCGAGACCGGCGTCGTCTACGCGCACGAC GACGACGACCGCGGCCGCTACGGCAAGCTGCTCTGCGCACGCTTCGCCGGCGCCGCCGGC GTCCGCCGCATCATCCGCAGCTACCTCGCCGCCACCGACGACGCGCCCTCCTCTTCCTCC TCCGCCGGTGGTGGCAGTGGCAGAGGTGAGGCTGGCCATGGCGGTGGAGCTCCCGTCGAT GATGCTGTCCTCGAGAGCTTGTCTGCGGCTGTGTTCTTTGAAATTCAGCTGTACAAGTCA GAAGGGGAAGGGAATTACCTGATGGATCTGAAGAGGCTTTCTGGCCCACAGCTTCAATAC CTCAACATATGCTCAGAGTTAAGCTCCAAGTTGAGAGCAATTAACTGAGGCGGTAGAAAT TAACAGTCTCCTCCAAGGAAGAAATAATCTGAGGAAATATTAGGTTATCCCTCTTTTCCT TTTGTTTTTAGTGAAAGGAAAAGCTAGCATGTATGAGAGGGAAAAATTAAAGAAAAATAC ATATAACACTATGAGATGAACTTATACAAATATATACTAATTAAATCCGTCAGGATTTAT CAATTT