Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0191700-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:4949828:4963161:1 gene:Os07g0191700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to AT.I.24-9 protein (Fragment). (Os07t0191700-01)
Sequence	ATGTCGCTCTCCTCCACCTCCACCTCCTCCCTCCTCCTCCTCCTCTCCCCACGCGGCAAC CCTAGGCGCCTCCTCCCCCTCCTCCTCCCTCTCCGCCTCTCCTCCTCCTCCTCCGCCGCC GCCGCTGCCGCTGCAATGCCTCCCCGCCGCGACCGCCACCACGGCAAGCAGCCGCAGCAG CAGTGGAAGCCCAAGGCCACGGACCCCGCGGCCGCGGCGCCGGCTGTGGTGGCGGCGGCA TCCTCACCCGCGTCGTCGACGTCCTCTTCCGCTGATTTCGCCGGGGGGGTCGAGAGGATG ACCATCTCCCCGTCCCCGCAGGGAGGGGCGTCGCAGGTGTGGGTGCCCAGGGGGTACGCG ACCTCGGCGTCGTCGTCCTCCTCCTCCTCGTCGGCGGCGGCGGCTGAGCAGCGCATCGAC GCTGAAAAGCTCTCCAGGGTGTTCAAGGCCGCCCCGAACTTCGAGGTGGACAACAACACG TTCATCCAGTCGCAGATCAGGGCCACCTTCTACCCCAAGTTCGAGAACGAGAAATCCGAT CAGGAGACTAGAACCCGGATGATTGAGATGGTGTCACATGGCTTAGCTACCTTGGAGGTT ACGCTCAAACATTCAGGGTCTCTTTTCATGTATGCTGGCCACCATGGTGGTGCATATGCC AAGAACAGCTTTGGAAATATTTACACAGCTGTGGGCGTTTTTGTTCTGGGACGATTGTTT CGTGAAGCTTGGGGGAAGGAAGCACCTAGAATGCAAGAGGAATTCAATGTTTTTCTTGAG AAAAAATGCATAAGCATTTCAATGGAACTTGTCACTGCTGTGTTAGGAGACCATGGTCAA AGGCCAAAGGATGATTATGCTGTGATTACTGCTGTGACTGAGTTGGGTCATGGCAAGCCA AAATTTTATTCTACTCCAGAGGTAATTGAGTTTTGTCGGAAATGGCGTCTACCTACAAAC CATGTCTGGCTATTTTCGACAAGGAAATCTGCCTCGTCATTTTTTGCTGCATATGACGCT CTATGTGAAGAGGGGACAGCAACATCTGTTTGCAAAGCCCTAGATGAGATAGCTGATGTA GCTGTACCAGGGTCAAAGGATCATGTAAAGGTGCAGGGTGAGATACTTGAAGGCCTGGTT GCCCGTATTGTTAGCCGTGAAAGTTCAGTGCAAATAGAAGAAGTCTTGAGGAACTATCCC CTGCCTCCATTAGATGGAGTTGGCTCTGATTTAGGACCAAGTCTGCGAGAAATATGTGCT GCTAATAGATCAGATGAAAAGCAGCAAATTAAAGCACTTCTTGAAAATGTTGGACCTTCA ATGTGTCCAGACCATTCTGATTGGTTTGGATGTAGTGGCCTTGATGATCATCAGTCTCCA AGTGCTAACAGATCGGTCGTCACTAAGTTTTTGCAAGCACATCCTACAGACTACACAACT AAGAAACTGCAGGAGATGATTCGTGTGATGAAGCAGAGGAATTTCCCTGCAGCTTTTAAA TGTTATTGGAACTACCACAAAATTGACTCTCTATCGAATGACAGCTTGTATTACAAAATG GTCATCCATGTGCTCAGTGATTCTGTTTTTAGACGCTATCAGCAAGAGATGAGGAGAAAT CAAGGGTTGTGGCCACTGTATAGGGGTTTCTTTGTTGATGTAAACCTGTTCAAGGTTAAT AATATGAAATCTTCCATACCTTCGGAAGACATTGACACCTCACTGAAAAATATCAATGGT GCCTTGGATTCAAATTCGTCAGCTAAGGATGGTCTGGCTGATGAGGATTCAAATCTGATG GTGAAGCTAAAATTCCTGACATATAAGCTACGCACTTTTTTAATTCGAAATGGTCTGTCT ACACTTTTCAAAGACGGTCCTTCTGCTTATAAAACTTACTACCTGAGGCAGATGAAGAAC TGGGGAACATCAGCAAGTAAACAGAAAGAACTTAGCAAATTGCTGGATGAATGGGCTGTC TATATTAGAAGGAAGTATGGGAATAAGCCACTTTCATCCTCAACATATCTTAGTGAAGCT GAGCCTTTCCTTGAACAGTATGCTAAGCGCAGCCCTGAAAACCAGGCTTTGATAGGGGCA GCTGGTGACTTGGTTCAGACAGAAAATTTCTTGGCGATACTTGAGGCAAAGAGAGATGAA GAGGGTGATCTTCAGGCTGAACGTGGTACTGCACCACCTAGTCCTACATCAACATCCTTG GATGTAGTTCCGAAAGCCGAAGGCTTGATTGTCTTCTTTCCTGGTATACCTGGCTGTGCA AAGTCAGCTCTATGTAAGGAGATATTAACCACTCCTGGTGGCCTAGGTGATAATCGTCCT CTTCATAGTTTGATGGGAGATCTTATTAAAGGAAGGTACTGGCAAAAAGTTGCGGATGAA CGAAAAAAGAAACCATTTCGAATAACCCTTGCTGACAAAAATGCACCAAACGAAGAAGTG TGGAGGCAGATTGAGGATATGTGTAGGACAACAAAGGCTGCTGCTGTTCCTGTTATTCCT GATTCTGAAGGCACAGATTCAAATCCATTTTCTCTTGATGCTCTTGCTGTCTTCATGTTT CGTGTACTTCAACGGGACAATCATCCTGGTAATCTGGACAAGGCATCACCAAATGCTGGC TATGTTCTGTTAATGTTTTACAACCTCTACGATGGCAAGAGTCGAAGAGAATTTGAAAGT GAACTATATGAGCGTTTTGGATCCTTGGTTAAGATGCCACTATTAAAGCCAGATAGAGCC CCGCTGCCTGATGAAGTGAAAGCTATTTTAGATGAAGGGATCAGCTTGTTCAGACTGCAT CAAAGCAGACATGGAAGAGCGGAGCCATCAAAAGGTGCATATGCTAAAGAATGGGCACAG TGGGAGAAAAGGTTGCGCCAGGTTTTGTTTGCGAACAAAGACTATCTCAACTCTATCCAG GTTCCATTTGACTTTGCAGTGAAAGAAGTATTGGAGCAGTTGAAGTCTGTTGCGAAAGGT GATCTTAAAACGCCTGATACCGCGAAGCGGAAGTTTGGCAATATTGTCTTCGCTGCTGTT ACGTTACCCCCAGCAGATATATTGGGTGCTCTCCCAAAGCTAGCAGAGGACACCGACGCC AACAAGTTCCTCAACAACACAAAACTCGCGGATAACCTGACCAAGGCTCATGTCACCCTT GCCCACAAAAGAGCCCATGGCGTAGCCGCGGTCTCAAGCTACGGTGTCTACCAGAACCAT CAAGTCCCTGTCATCTTCAACGCCTTCCTCTTCTCCGACAAGATGGCCGCCCTCGAGGTG GAGCTCGGGACGGTGAACGGCGAGAAGATCGCGTCCCGGAACGACTGGCCGCACGCCACC CTGTGGACCGCCCCAGGCGTTGCGCCGAAGGAGGCAAACACGCTGCCGCAGCTAGTCACG GAAGGGAAGGCGAAGCGGGTGGCCATAGACCCTCCCATCACCATATCAGGAGTGCTGGAC TTCTACTGA

Peptide Sequence

PEP ID	Os07t0191700-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:4949828:4963161:1 gene:Os07g0191700 transcript:Os07t0191700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to AT.I.24-9 protein (Fragment). (Os07t0191700-01)
Sequence	MSLSSTSTSSLLLLLSPRGNPRRLLPLLLPLRLSSSSSAAAAAAAMPPRRDRHHGKQPQQ QWKPKATDPAAAAPAVVAAASSPASSTSSSADFAGGVERMTISPSPQGGASQVWVPRGYA TSASSSSSSSSAAAAEQRIDAEKLSRVFKAAPNFEVDNNTFIQSQIRATFYPKFENEKSD QETRTRMIEMVSHGLATLEVTLKHSGSLFMYAGHHGGAYAKNSFGNIYTAVGVFVLGRLF REAWGKEAPRMQEEFNVFLEKKCISISMELVTAVLGDHGQRPKDDYAVITAVTELGHGKP KFYSTPEVIEFCRKWRLPTNHVWLFSTRKSASSFFAAYDALCEEGTATSVCKALDEIADV AVPGSKDHVKVQGEILEGLVARIVSRESSVQIEEVLRNYPLPPLDGVGSDLGPSLREICA ANRSDEKQQIKALLENVGPSMCPDHSDWFGCSGLDDHQSPSANRSVVTKFLQAHPTDYTT KKLQEMIRVMKQRNFPAAFKCYWNYHKIDSLSNDSLYYKMVIHVLSDSVFRRYQQEMRRN QGLWPLYRGFFVDVNLFKVNNMKSSIPSEDIDTSLKNINGALDSNSSAKDGLADEDSNLM VKLKFLTYKLRTFLIRNGLSTLFKDGPSAYKTYYLRQMKNWGTSASKQKELSKLLDEWAV YIRRKYGNKPLSSSTYLSEAEPFLEQYAKRSPENQALIGAAGDLVQTENFLAILEAKRDE EGDLQAERGTAPPSPTSTSLDVVPKAEGLIVFFPGIPGCAKSALCKEILTTPGGLGDNRP LHSLMGDLIKGRYWQKVADERKKKPFRITLADKNAPNEEVWRQIEDMCRTTKAAAVPVIP DSEGTDSNPFSLDALAVFMFRVLQRDNHPGNLDKASPNAGYVLLMFYNLYDGKSRREFES ELYERFGSLVKMPLLKPDRAPLPDEVKAILDEGISLFRLHQSRHGRAEPSKGAYAKEWAQ WEKRLRQVLFANKDYLNSIQVPFDFAVKEVLEQLKSVAKGDLKTPDTAKRKFGNIVFAAV TLPPADILGALPKLAEDTDANKFLNNTKLADNLTKAHVTLAHKRAHGVAAVSSYGVYQNH QVPVIFNAFLFSDKMAALEVELGTVNGEKIASRNDWPHATLWTAPGVAPKEANTLPQLVT EGKAKRVAIDPPITISGVLDFY

Transcript Sequence

Transcript ID	Os07t0191700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:4949828:4963161:1 gene:Os07g0191700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to AT.I.24-9 protein (Fragment). (Os07t0191700-01)
Sequence	ACCCATTCTCCCCTCTCTCCGCCGAACCCTCCAGACTCCGCCGTGCCACGCACGGCGGCG CCGCCCCTCTAAACCCACCAACTCCGGCGCCGCCTCGCCCCCGCACTTATATGTCGCTCT CCTCCACCTCCACCTCCTCCCTCCTCCTCCTCCTCTCCCCACGCGGCAACCCTAGGCGCC TCCTCCCCCTCCTCCTCCCTCTCCGCCTCTCCTCCTCCTCCTCCGCCGCCGCCGCTGCCG CTGCAATGCCTCCCCGCCGCGACCGCCACCACGGCAAGCAGCCGCAGCAGCAGTGGAAGC CCAAGGCCACGGACCCCGCGGCCGCGGCGCCGGCTGTGGTGGCGGCGGCATCCTCACCCG CGTCGTCGACGTCCTCTTCCGCTGATTTCGCCGGGGGGGTCGAGAGGATGACCATCTCCC CGTCCCCGCAGGGAGGGGCGTCGCAGGTGTGGGTGCCCAGGGGGTACGCGACCTCGGCGT CGTCGTCCTCCTCCTCCTCGTCGGCGGCGGCGGCTGAGCAGCGCATCGACGCTGAAAAGC TCTCCAGGGTGTTCAAGGCCGCCCCGAACTTCGAGGTGGACAACAACACGTTCATCCAGT CGCAGATCAGGGCCACCTTCTACCCCAAGTTCGAGAACGAGAAATCCGATCAGGAGACTA GAACCCGGATGATTGAGATGGTGTCACATGGCTTAGCTACCTTGGAGGTTACGCTCAAAC ATTCAGGGTCTCTTTTCATGTATGCTGGCCACCATGGTGGTGCATATGCCAAGAACAGCT TTGGAAATATTTACACAGCTGTGGGCGTTTTTGTTCTGGGACGATTGTTTCGTGAAGCTT GGGGGAAGGAAGCACCTAGAATGCAAGAGGAATTCAATGTTTTTCTTGAGAAAAAATGCA TAAGCATTTCAATGGAACTTGTCACTGCTGTGTTAGGAGACCATGGTCAAAGGCCAAAGG ATGATTATGCTGTGATTACTGCTGTGACTGAGTTGGGTCATGGCAAGCCAAAATTTTATT CTACTCCAGAGGTAATTGAGTTTTGTCGGAAATGGCGTCTACCTACAAACCATGTCTGGC TATTTTCGACAAGGAAATCTGCCTCGTCATTTTTTGCTGCATATGACGCTCTATGTGAAG AGGGGACAGCAACATCTGTTTGCAAAGCCCTAGATGAGATAGCTGATGTAGCTGTACCAG GGTCAAAGGATCATGTAAAGGTGCAGGGTGAGATACTTGAAGGCCTGGTTGCCCGTATTG TTAGCCGTGAAAGTTCAGTGCAAATAGAAGAAGTCTTGAGGAACTATCCCCTGCCTCCAT TAGATGGAGTTGGCTCTGATTTAGGACCAAGTCTGCGAGAAATATGTGCTGCTAATAGAT CAGATGAAAAGCAGCAAATTAAAGCACTTCTTGAAAATGTTGGACCTTCAATGTGTCCAG ACCATTCTGATTGGTTTGGATGTAGTGGCCTTGATGATCATCAGTCTCCAAGTGCTAACA GATCGGTCGTCACTAAGTTTTTGCAAGCACATCCTACAGACTACACAACTAAGAAACTGC AGGAGATGATTCGTGTGATGAAGCAGAGGAATTTCCCTGCAGCTTTTAAATGTTATTGGA ACTACCACAAAATTGACTCTCTATCGAATGACAGCTTGTATTACAAAATGGTCATCCATG TGCTCAGTGATTCTGTTTTTAGACGCTATCAGCAAGAGATGAGGAGAAATCAAGGGTTGT GGCCACTGTATAGGGGTTTCTTTGTTGATGTAAACCTGTTCAAGGTTAATAATATGAAAT CTTCCATACCTTCGGAAGACATTGACACCTCACTGAAAAATATCAATGGTGCCTTGGATT CAAATTCGTCAGCTAAGGATGGTCTGGCTGATGAGGATTCAAATCTGATGGTGAAGCTAA AATTCCTGACATATAAGCTACGCACTTTTTTAATTCGAAATGGTCTGTCTACACTTTTCA AAGACGGTCCTTCTGCTTATAAAACTTACTACCTGAGGCAGATGAAGAACTGGGGAACAT CAGCAAGTAAACAGAAAGAACTTAGCAAATTGCTGGATGAATGGGCTGTCTATATTAGAA GGAAGTATGGGAATAAGCCACTTTCATCCTCAACATATCTTAGTGAAGCTGAGCCTTTCC TTGAACAGTATGCTAAGCGCAGCCCTGAAAACCAGGCTTTGATAGGGGCAGCTGGTGACT TGGTTCAGACAGAAAATTTCTTGGCGATACTTGAGGCAAAGAGAGATGAAGAGGGTGATC TTCAGGCTGAACGTGGTACTGCACCACCTAGTCCTACATCAACATCCTTGGATGTAGTTC CGAAAGCCGAAGGCTTGATTGTCTTCTTTCCTGGTATACCTGGCTGTGCAAAGTCAGCTC TATGTAAGGAGATATTAACCACTCCTGGTGGCCTAGGTGATAATCGTCCTCTTCATAGTT TGATGGGAGATCTTATTAAAGGAAGGTACTGGCAAAAAGTTGCGGATGAACGAAAAAAGA AACCATTTCGAATAACCCTTGCTGACAAAAATGCACCAAACGAAGAAGTGTGGAGGCAGA TTGAGGATATGTGTAGGACAACAAAGGCTGCTGCTGTTCCTGTTATTCCTGATTCTGAAG GCACAGATTCAAATCCATTTTCTCTTGATGCTCTTGCTGTCTTCATGTTTCGTGTACTTC AACGGGACAATCATCCTGGTAATCTGGACAAGGCATCACCAAATGCTGGCTATGTTCTGT TAATGTTTTACAACCTCTACGATGGCAAGAGTCGAAGAGAATTTGAAAGTGAACTATATG AGCGTTTTGGATCCTTGGTTAAGATGCCACTATTAAAGCCAGATAGAGCCCCGCTGCCTG ATGAAGTGAAAGCTATTTTAGATGAAGGGATCAGCTTGTTCAGACTGCATCAAAGCAGAC ATGGAAGAGCGGAGCCATCAAAAGGTGCATATGCTAAAGAATGGGCACAGTGGGAGAAAA GGTTGCGCCAGGTTTTGTTTGCGAACAAAGACTATCTCAACTCTATCCAGGTTCCATTTG ACTTTGCAGTGAAAGAAGTATTGGAGCAGTTGAAGTCTGTTGCGAAAGGTGATCTTAAAA CGCCTGATACCGCGAAGCGGAAGTTTGGCAATATTGTCTTCGCTGCTGTTACGTTACCCC CAGCAGATATATTGGGTGCTCTCCCAAAGCTAGCAGAGGACACCGACGCCAACAAGTTCC TCAACAACACAAAACTCGCGGATAACCTGACCAAGGCTCATGTCACCCTTGCCCACAAAA GAGCCCATGGCGTAGCCGCGGTCTCAAGCTACGGTGTCTACCAGAACCATCAAGTCCCTG TCATCTTCAACGCCTTCCTCTTCTCCGACAAGATGGCCGCCCTCGAGGTGGAGCTCGGGA CGGTGAACGGCGAGAAGATCGCGTCCCGGAACGACTGGCCGCACGCCACCCTGTGGACCG CCCCAGGCGTTGCGCCGAAGGAGGCAAACACGCTGCCGCAGCTAGTCACGGAAGGGAAGG CGAAGCGGGTGGCCATAGACCCTCCCATCACCATATCAGGAGTGCTGGACTTCTACTGAC CGACCACCCTCTTTTTTCTTTATTTTCTGGTGGCCTAGAGGTTGAACATTACTAACAAGT GGTAACGGCGATAGCTTTGTAGATGCATCGAGTTGGAGGGCTCTTGTTTTTTCGGGGATT ACAGGACAGGTCGAGGTATTGTTTTTTATGTTTGAATTTGGTGAAAAATGAAATATAGGA GTATATGCTGCAGTATAAATAAAATTATTTAACTGCTGTCTACGGGC