Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0191500-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:4935899:4937910:1 gene:Os07g0191500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0191500-01)
Sequence	ATGCTCTCGCTCGCCGCCTCCTCCCTCCCCTCCACGCGGACCCACCGCCCGGACGCCGCC TCGCACTCCTCCTCCTCCTCCGTCCGCCTCCTCCGCTCGCTCGCACGGTCCCGCCGCGCG GACCTCGCGCACCGGGCGCTCCTGCTCTTCCGCTCGCTCCAGTCCACCCCGTCCCCGCCG CCGCCGCACGTCTCGCTGCCGGCCGTGCTCTCCGCGGCGGCCTTCCTCTCGGCGCTCCCC GAGGGACGCCAGCTGCACGCGCTCGCCGCCAAGCTCGGACTCGCCCCGTCCCACACCGTC GTCGCCAACTCGCTCCTCCACCTCTACTCCTCCTGCGGCCTCCCGGGCGCCGCGCTCGAC CTCTTCCGCCGCATCCCCGACAGGTCGCTCGTGTCGTGGAACACCGCCGTCGACGCCCTC GTCGGGAACGGCGACCACCTCGCCGCGCTCGACCTCTTCCGGGAGATGCAGCGGGACACG GAGCTCGCGCCCGACGCGTACACCGTGCAGAGCGTCCTCGGCGCGTGCGCCGGCGCCGGC GCGCTCTCGCTCGGCGTCTACGCGCACGCGTTGCTGCTCAGGGAGCTCGGGGGTGACGGC GACGGCGAGGCGGTGTCCCGCGACATGCTGATCAACAACTCGCTGGTGGATCTGTACGGG AAGTGCGGGGCGCTGGAGCTCGCGCAGCAGGTGTTCGACAGAATGCCCGCGCGGGACCTC GCGTCTTGGAACGTGATGATCCTCACGCTGGCCAACCACGGTCGTGTCTGTGAGTCGGTG GAGCTGTTCGATCGGATGACTCAGGTGGAGAAGATGGCTCCGAATGCCATCACGTTCGTC GCGGTGCTCAGCGCGTGCAACCATGGTGGGCTAGTGGAGGAGGGCAGGAGATATTTTGCA ATGATGGTTGATCAGTACAGAATCAAGCCTAGGATCGAACACTATGGGTGCATGGTCGAT CTCTTGGCACGAGCAGGGTTCATCGAGGAAGCTCTCGATATCGTGGCTGGAATGAACTGT CGGCCCGACGCCATCATCTGGAGAAGCCTACTTGATGCATGCTGCAAGAAGAATGCCGGA TTGGAGCTTACTGAGGCCATGGCCAAGCTAGCACTGGAGGTTCCTGATGATGCTGTGAGC GGTGTGTATGTATTGCTTTCGAGGGTTTATGCATCCGCGCAGCGGTGGAACGATGTGGGC ATGGTGCGGCGGTTGATGGTGGAAGAGGGCGTCAAGAAGGAGCCAGGGTTCAGTTCCATT GAAATGGATGGCTTGGTTCATCAGTTCGTCGCGGGCGATACTTCGCATCCACAATCTGAG GCGATATATGAAAAACTGGATGAAATTCAGCTGAAGCTCACATCTGCTGGATACAAGCCA GATTTATCAGAGGCTCCTTTGGTTGCTAGTATTGACAATGCCAAGGGCGCCGCCCTCCGG TTGCACAGCGAGCGTCTGGCCATATCGTTTGGTCTGCTCAACGCGACGCCTGGGGCACCT ATCCGGATTCTGAAGAACCTGAGAGTTTGCAAGGACTGTCACACAATCAGCAAGCTCATA TCGAAGCTCTATGGCGTGGAGATCATCGTGAGGGATCGAATTCGATTCCATCATTTCAAG GATGGGTCATGTTCTTGCAAAGATTACTGGTGA

Peptide Sequence

PEP ID	Os07t0191500-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:4935899:4937910:1 gene:Os07g0191500 transcript:Os07t0191500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0191500-01)
Sequence	MLSLAASSLPSTRTHRPDAASHSSSSSVRLLRSLARSRRADLAHRALLLFRSLQSTPSPP PPHVSLPAVLSAAAFLSALPEGRQLHALAAKLGLAPSHTVVANSLLHLYSSCGLPGAALD LFRRIPDRSLVSWNTAVDALVGNGDHLAALDLFREMQRDTELAPDAYTVQSVLGACAGAG ALSLGVYAHALLLRELGGDGDGEAVSRDMLINNSLVDLYGKCGALELAQQVFDRMPARDL ASWNVMILTLANHGRVCESVELFDRMTQVEKMAPNAITFVAVLSACNHGGLVEEGRRYFA MMVDQYRIKPRIEHYGCMVDLLARAGFIEEALDIVAGMNCRPDAIIWRSLLDACCKKNAG LELTEAMAKLALEVPDDAVSGVYVLLSRVYASAQRWNDVGMVRRLMVEEGVKKEPGFSSI EMDGLVHQFVAGDTSHPQSEAIYEKLDEIQLKLTSAGYKPDLSEAPLVASIDNAKGAALR LHSERLAISFGLLNATPGAPIRILKNLRVCKDCHTISKLISKLYGVEIIVRDRIRFHHFK DGSCSCKDYW

Transcript Sequence

Transcript ID	Os07t0191500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:4935899:4937910:1 gene:Os07g0191500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0191500-01)
Sequence	ATGCCCGCGTCGCCGTTGCCGCCGCCGCAGCCGCCGCCATGCTCTCGCTCGCCGCCTCCT CCCTCCCCTCCACGCGGACCCACCGCCCGGACGCCGCCTCGCACTCCTCCTCCTCCTCCG TCCGCCTCCTCCGCTCGCTCGCACGGTCCCGCCGCGCGGACCTCGCGCACCGGGCGCTCC TGCTCTTCCGCTCGCTCCAGTCCACCCCGTCCCCGCCGCCGCCGCACGTCTCGCTGCCGG CCGTGCTCTCCGCGGCGGCCTTCCTCTCGGCGCTCCCCGAGGGACGCCAGCTGCACGCGC TCGCCGCCAAGCTCGGACTCGCCCCGTCCCACACCGTCGTCGCCAACTCGCTCCTCCACC TCTACTCCTCCTGCGGCCTCCCGGGCGCCGCGCTCGACCTCTTCCGCCGCATCCCCGACA GGTCGCTCGTGTCGTGGAACACCGCCGTCGACGCCCTCGTCGGGAACGGCGACCACCTCG CCGCGCTCGACCTCTTCCGGGAGATGCAGCGGGACACGGAGCTCGCGCCCGACGCGTACA CCGTGCAGAGCGTCCTCGGCGCGTGCGCCGGCGCCGGCGCGCTCTCGCTCGGCGTCTACG CGCACGCGTTGCTGCTCAGGGAGCTCGGGGGTGACGGCGACGGCGAGGCGGTGTCCCGCG ACATGCTGATCAACAACTCGCTGGTGGATCTGTACGGGAAGTGCGGGGCGCTGGAGCTCG CGCAGCAGGTGTTCGACAGAATGCCCGCGCGGGACCTCGCGTCTTGGAACGTGATGATCC TCACGCTGGCCAACCACGGTCGTGTCTGTGAGTCGGTGGAGCTGTTCGATCGGATGACTC AGGTGGAGAAGATGGCTCCGAATGCCATCACGTTCGTCGCGGTGCTCAGCGCGTGCAACC ATGGTGGGCTAGTGGAGGAGGGCAGGAGATATTTTGCAATGATGGTTGATCAGTACAGAA TCAAGCCTAGGATCGAACACTATGGGTGCATGGTCGATCTCTTGGCACGAGCAGGGTTCA TCGAGGAAGCTCTCGATATCGTGGCTGGAATGAACTGTCGGCCCGACGCCATCATCTGGA GAAGCCTACTTGATGCATGCTGCAAGAAGAATGCCGGATTGGAGCTTACTGAGGCCATGG CCAAGCTAGCACTGGAGGTTCCTGATGATGCTGTGAGCGGTGTGTATGTATTGCTTTCGA GGGTTTATGCATCCGCGCAGCGGTGGAACGATGTGGGCATGGTGCGGCGGTTGATGGTGG AAGAGGGCGTCAAGAAGGAGCCAGGGTTCAGTTCCATTGAAATGGATGGCTTGGTTCATC AGTTCGTCGCGGGCGATACTTCGCATCCACAATCTGAGGCGATATATGAAAAACTGGATG AAATTCAGCTGAAGCTCACATCTGCTGGATACAAGCCAGATTTATCAGAGGCTCCTTTGG TTGCTAGTATTGACAATGCCAAGGGCGCCGCCCTCCGGTTGCACAGCGAGCGTCTGGCCA TATCGTTTGGTCTGCTCAACGCGACGCCTGGGGCACCTATCCGGATTCTGAAGAACCTGA GAGTTTGCAAGGACTGTCACACAATCAGCAAGCTCATATCGAAGCTCTATGGCGTGGAGA TCATCGTGAGGGATCGAATTCGATTCCATCATTTCAAGGATGGGTCATGTTCTTGCAAAG ATTACTGGTGATCACATCATGAGCCATAACGTCTGATGCTACCAGTAGAGATCCCTTTGG TGTGTTAGAAGCGCCTCTTGCCTCCAAGCCAAGGTGAAATGGGATGTTCAATGCTGACTA CAGCCTTTCATATTTTTTTTCTAGGACAGATGAACATTAGCAGATTGATTAGAGAAACAG GACATTGTATAATATATTCAATCTCATTTTCTTCTTGAGCCATCAAGGTAAATATTCTAA TTACTCTGAATCACGACTGTGTCTATATGAACAACTATGTCTATATGAACAACTATGTTC ACTTCATCTTGCAGAAAAATCTGAGATAAATG