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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0190800-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:4880571:4882104:-1 gene:Os07g0190800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:THIOREDOXIN H-TYPE 5 description:Similar to Thioredoxin h. (Os07t0190800-01)
Sequence

ATGGGCGGCGCCTTCTCGACGTCGAAGCCGAAGCCCGCCGCCGGCGAGGAGGGCGGCGAG
TCCGCCGTGGTGGCCGTCCACTCCAAGGCCAAGTGGGACGAGCTGTGGGACGCCCACAAG
AACACCACAAAGCTGGTGGTGATAGACTTCTCGGCGTCGTGGTGTGGGCCGTGCAAGATG
ATGGAGCCGGTGTTCAAGGAGATGGCCGGCCGCTTCACCGACGTCGCCTTCCTCAAGGTC
GACGTCGACGAGCTCGCGGAGGTGGCGCGGACCTGGCGGGTGGAGGCGATGCCGACGTTC
GTGCTGGCGAGGGGCGGCGAGGAGGTCGGCCGCATCGTCGGCGCCGACAAGGACGAGCTC
GAGAAGACCATCAACACGCTCAGGTCATCGTCGTCGTCGACGGCGACGACGACGTGA

Peptide Sequence

PEP ID

Os07t0190800-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:4880571:4882104:-1 gene:Os07g0190800 transcript:Os07t0190800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:THIOREDOXIN H-TYPE 5 description:Similar to Thioredoxin h. (Os07t0190800-01)
Sequence

MGGAFSTSKPKPAAGEEGGESAVVAVHSKAKWDELWDAHKNTTKLVVIDFSASWCGPCKM
MEPVFKEMAGRFTDVAFLKVDVDELAEVARTWRVEAMPTFVLARGGEEVGRIVGADKDEL
EKTINTLRSSSSSTATTT

Transcript Sequence

Transcript ID

Os07t0190800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:4880571:4882104:-1 gene:Os07g0190800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:THIOREDOXIN H-TYPE 5 description:Similar to Thioredoxin h. (Os07t0190800-01)
Sequence

GCTGCAGACTTGCAGTGCCTCGATCAGCTCACTGTAACAAGATGGGCGGCGCCTTCTCGA
CGTCGAAGCCGAAGCCCGCCGCCGGCGAGGAGGGCGGCGAGTCCGCCGTGGTGGCCGTCC
ACTCCAAGGCCAAGTGGGACGAGCTGTGGGACGCCCACAAGAACACCACAAAGCTGGTGG
TGATAGACTTCTCGGCGTCGTGGTGTGGGCCGTGCAAGATGATGGAGCCGGTGTTCAAGG
AGATGGCCGGCCGCTTCACCGACGTCGCCTTCCTCAAGGTCGACGTCGACGAGCTCGCGG
AGGTGGCGCGGACCTGGCGGGTGGAGGCGATGCCGACGTTCGTGCTGGCGAGGGGCGGCG
AGGAGGTCGGCCGCATCGTCGGCGCCGACAAGGACGAGCTCGAGAAGACCATCAACACGC
TCAGGTCATCGTCGTCGTCGACGGCGACGACGACGTGATTGGTTGGGAGATGCATAAATA
AACATGTTGTCATGTTCATCAGTCATCACCACCTAGCTCTGCTGCTGGTTAATTTAAGTA
CTACCACTACCTTAGTTAATTAGCTCTCCCGGTTTGCCTAATAAATATTCCGCATTGTAA
TATAGCCAACTTAATTAGTTCGTATGTTCGCGTGTGTTGTGATCGTCTGCTAGTTATGTA
CAGTCTTGAAGCCTGAGTGCTGGAGCTAATAAAGATTTGCATAACTTGGATTGGATTTTC