Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0187400-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:4663426:4667478:-1 gene:Os07g0187400 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os07t0187400-00)
Sequence	ATGCTCAGGGCGCTCAACACGCCGACGCCGCCGCTCCGGCTCCGCCCGGCATGCCGCGTC GCCTCGCAGTGTGGTGGGCGGCCGAGCACGAGGCGCAGGGGGGCCGGAGGCGGGCCGCGC AGGGCGGTGCCGCAGCCGCCCGTGCGCCGGCCGTCCGGGGACCGCGCGTGCACGCCGTGG CGCGGCGGGGTGGGTGCCGCGGCGCCGGCGCCGGTGACACCCGTCGCCGCGGCGGGGGCG AGGGATGAGCTGGAGGCGTTCTTGGAGGTGGTGCCGGCGAGGATGAGGCGCGGGCTGGCG CGGCACCCGGAGGTGAGGGAGCTGGTGGAGGTCGTCATGGACCTCGGCCGCCGGCCGCTC GCGCGGTTCCCGTCCGGGGACTGGGTGATCTCCGAGCAGGCCGTCACCGCCGATGATCTC CACCAGGCCGTCTCAAAGGTAGGCGACTTCTCTGAAGACAACCGATCCGGGATCAACCAC TCGTTGCACAGGATCAGCGCCATCCGGAACCGCAAGGCTCATATAATTGGTCTCACTTGC CGTGTGGGCCGGGCTATATCTGGAAGTGCAGAGATGATCCGTGATCTGGTTGTGGGAGGC GGTTCAATATTGGTGATTGGACCTCCAGGGGTTGGGAAGACTACTCTGATCAGGGAAATA GCTAGAATTTTGGCTGATGAGGGTAAGAAACGTGTGATCATAGTGGACACGTCAAATGAA ATAGGAGGTGATGGGGATGTGCCTCATTCTGGCATCGGGCGTTCTAGGAGAATGCAAGTT CCCAAAGTTAGCATGCAGCATAACGTAATGATTGAAGCTGTTGAAAATCACATGCCGGAA GTTATTGTTATCGATGAGATTGGTACTGAGCTTGAAGCAATGGCAGCCAGCACCATTGCT CAAAGGGGTGTTCAACTTGTTGGAACTGCACATGGGGTGACAATTGAGAGCATAATTAAA AACCCTTGTTTGCAAGTGCTTGTTGGTGGAATTGAGAGTGTGACTCTTGGCGATGAGGAG GCGAAAAAGCGTAAAGTTCAGAAAACAATTCTTGAGAGAAAAGGACCTCCAACATTTTCA TGTGCTGTGGAGATGATTTCAAAGACTGAGTGCCGAGTACACCACAAGTTAGAGGCTACT GTTGATGCTATTCTTGCAGGGAAGCCTCCTAAATTTGAAGCACGTAAGATGGATTACAAG GCTACTGAGTCAGGAAGATCGTTGGTGATACCTGAAAGAGAATATGAAACAGAACCCTTG CCTTCATACCAGGAACATCATTTTGCCAAGGCAATGCCATCCGAAGATAACTTCGATGAT GATTTCAGCACCCGGAGAACAGAAAGCAAGAGTGTACCATCAAATGATAATTTCAACGAT GATTTTGGCTCTACAAGAAAAACAAAAGGCAAAACATCTGTACCTGGAAAATCTCCAGTC CATGTGTACACGTACCAGATTTCAGAAGCTGATATCTTGCAAGTAGCAACAGTGATGGGA TTCGATGATGAATTAGATGTGACGGATGACATTGGAGCTGCCAATGTGATTCTTGCATCG AGTTCTGAGATGAAGCAGAATCACTGGATTCGCAATGTCGCCAAATACCACAAGCTTCCC ATATTTGTTGTTAAGACAAACACAATGGCTCAGATAGTAAAGGCTGTTAGAATGATTGTT GGGAGGGATAAACTCAATGCACCAACACGCAAGCAGCCTAAGGTTGTGGTGGGAGAGATA GAGATTGAAGATGATGCTCCAAAGAGGAAGCCATCATTGGAGGAAATTGATGCTCTGGAG GAGGCCCGCCTCGCAATCGAGTACATTGTAATCCCAGGTGGAGAGCCCGTAGAACTCCTC CCAAGATGTTCAGAAATAGTTGCCCGGCAACTGGAGCTTGTTGAGAGCTACCAGCTCCTG GCCGAAACCTTTGGAACTGACTCCAACTCGAGGTTGCAGATTCTTCCGGTGAAAATAACC AAGAAGAGCTCAAGCAAAGGCAGTGCAGGATCGATGCCCAAGCAAGGCAGCTCTGACCTG ATCGTCAGCGACAACGGAGGCGGCTCCAGTTTTTCTCGGCTGCCCTTTCTGCCGAAATGA

Peptide Sequence

PEP ID	Os07t0187400-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:4663426:4667478:-1 gene:Os07g0187400 transcript:Os07t0187400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os07t0187400-00)
Sequence	MLRALNTPTPPLRLRPACRVASQCGGRPSTRRRGAGGGPRRAVPQPPVRRPSGDRACTPW RGGVGAAAPAPVTPVAAAGARDELEAFLEVVPARMRRGLARHPEVRELVEVVMDLGRRPL ARFPSGDWVISEQAVTADDLHQAVSKVGDFSEDNRSGINHSLHRISAIRNRKAHIIGLTC RVGRAISGSAEMIRDLVVGGGSILVIGPPGVGKTTLIREIARILADEGKKRVIIVDTSNE IGGDGDVPHSGIGRSRRMQVPKVSMQHNVMIEAVENHMPEVIVIDEIGTELEAMAASTIA QRGVQLVGTAHGVTIESIIKNPCLQVLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFS CAVEMISKTECRVHHKLEATVDAILAGKPPKFEARKMDYKATESGRSLVIPEREYETEPL PSYQEHHFAKAMPSEDNFDDDFSTRRTESKSVPSNDNFNDDFGSTRKTKGKTSVPGKSPV HVYTYQISEADILQVATVMGFDDELDVTDDIGAANVILASSSEMKQNHWIRNVAKYHKLP IFVVKTNTMAQIVKAVRMIVGRDKLNAPTRKQPKVVVGEIEIEDDAPKRKPSLEEIDALE EARLAIEYIVIPGGEPVELLPRCSEIVARQLELVESYQLLAETFGTDSNSRLQILPVKIT KKSSSKGSAGSMPKQGSSDLIVSDNGGGSSFSRLPFLPK

Transcript Sequence

Transcript ID	Os07t0187400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:4663426:4667478:-1 gene:Os07g0187400 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os07t0187400-00)
Sequence	CTCACTCCTCCCCCTCCACTCGCCCGCGGAATCTTCCTTCCTCCGATTCCCTCCTCCTCT TCTTCTTCCCCTCCTCCACCTCCGCGCCCTCCACCTGTTCGACGAAATATCCCACCCACC CTCCCCCTCTCGCCGCGCACCGCCGCTACTTATACCCGCCATTTTCACCTCGCCCCCCCG CGCTTCCCGCCACTAACATTCACTGACTTAGCTCGTGGTAGTTTGTAGTTTGGAGTCGTA CTGCGATGCTCAGGGCGCTCAACACGCCGACGCCGCCGCTCCGGCTCCGCCCGGCATGCC GCGTCGCCTCGCAGTGTGGTGGGCGGCCGAGCACGAGGCGCAGGGGGGCCGGAGGCGGGC CGCGCAGGGCGGTGCCGCAGCCGCCCGTGCGCCGGCCGTCCGGGGACCGCGCGTGCACGC CGTGGCGCGGCGGGGTGGGTGCCGCGGCGCCGGCGCCGGTGACACCCGTCGCCGCGGCGG GGGCGAGGGATGAGCTGGAGGCGTTCTTGGAGGTGGTGCCGGCGAGGATGAGGCGCGGGC TGGCGCGGCACCCGGAGGTGAGGGAGCTGGTGGAGGTCGTCATGGACCTCGGCCGCCGGC CGCTCGCGCGGTTCCCGTCCGGGGACTGGGTGATCTCCGAGCAGGCCGTCACCGCCGATG ATCTCCACCAGGCCGTCTCAAAGGTAGGCGACTTCTCTGAAGACAACCGATCCGGGATCA ACCACTCGTTGCACAGGATCAGCGCCATCCGGAACCGCAAGGCTCATATAATTGGTCTCA CTTGCCGTGTGGGCCGGGCTATATCTGGAAGTGCAGAGATGATCCGTGATCTGGTTGTGG GAGGCGGTTCAATATTGGTGATTGGACCTCCAGGGGTTGGGAAGACTACTCTGATCAGGG AAATAGCTAGAATTTTGGCTGATGAGGGTAAGAAACGTGTGATCATAGTGGACACGTCAA ATGAAATAGGAGGTGATGGGGATGTGCCTCATTCTGGCATCGGGCGTTCTAGGAGAATGC AAGTTCCCAAAGTTAGCATGCAGCATAACGTAATGATTGAAGCTGTTGAAAATCACATGC CGGAAGTTATTGTTATCGATGAGATTGGTACTGAGCTTGAAGCAATGGCAGCCAGCACCA TTGCTCAAAGGGGTGTTCAACTTGTTGGAACTGCACATGGGGTGACAATTGAGAGCATAA TTAAAAACCCTTGTTTGCAAGTGCTTGTTGGTGGAATTGAGAGTGTGACTCTTGGCGATG AGGAGGCGAAAAAGCGTAAAGTTCAGAAAACAATTCTTGAGAGAAAAGGACCTCCAACAT TTTCATGTGCTGTGGAGATGATTTCAAAGACTGAGTGCCGAGTACACCACAAGTTAGAGG CTACTGTTGATGCTATTCTTGCAGGGAAGCCTCCTAAATTTGAAGCACGTAAGATGGATT ACAAGGCTACTGAGTCAGGAAGATCGTTGGTGATACCTGAAAGAGAATATGAAACAGAAC CCTTGCCTTCATACCAGGAACATCATTTTGCCAAGGCAATGCCATCCGAAGATAACTTCG ATGATGATTTCAGCACCCGGAGAACAGAAAGCAAGAGTGTACCATCAAATGATAATTTCA ACGATGATTTTGGCTCTACAAGAAAAACAAAAGGCAAAACATCTGTACCTGGAAAATCTC CAGTCCATGTGTACACGTACCAGATTTCAGAAGCTGATATCTTGCAAGTAGCAACAGTGA TGGGATTCGATGATGAATTAGATGTGACGGATGACATTGGAGCTGCCAATGTGATTCTTG CATCGAGTTCTGAGATGAAGCAGAATCACTGGATTCGCAATGTCGCCAAATACCACAAGC TTCCCATATTTGTTGTTAAGACAAACACAATGGCTCAGATAGTAAAGGCTGTTAGAATGA TTGTTGGGAGGGATAAACTCAATGCACCAACACGCAAGCAGCCTAAGGTTGTGGTGGGAG AGATAGAGATTGAAGATGATGCTCCAAAGAGGAAGCCATCATTGGAGGAAATTGATGCTC TGGAGGAGGCCCGCCTCGCAATCGAGTACATTGTAATCCCAGGTGGAGAGCCCGTAGAAC TCCTCCCAAGATGTTCAGAAATAGTTGCCCGGCAACTGGAGCTTGTTGAGAGCTACCAGC TCCTGGCCGAAACCTTTGGAACTGACTCCAACTCGAGGTTGCAGATTCTTCCGGTGAAAA TAACCAAGAAGAGCTCAAGCAAAGGCAGTGCAGGATCGATGCCCAAGCAAGGCAGCTCTG ACCTGATCGTCAGCGACAACGGAGGCGGCTCCAGTTTTTCTCGGCTGCCCTTTCTGCCGA AATGACCATTGCTAGATTGACACTCTGATCTGATCACCGTTGCCCCCAAACTGTACATCA TTCTTCTTTCCTCTGCATTGTTTTTTTGTTGTACATAATACATACCTGTGCAGTGTTGTA AATAGTGTTTGAATGTTGAAGAATCGAAAGAGCAAAGCTAATTGTAATTGCCTTCCATTC TTTTACAGAAATAAAAATATCACAT