Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0186400-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:4606698:4614551:1 gene:Os07g0186400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SHL1. (Os07t0186400-01)
Sequence	ATGGCGAAGTCGCGGCCGCCCAAGCGGATCCTCGAGTCCTACACCATCAAGGGCTCCGAC AAAGTCATCAAGCCTGGGGACTGTGTGCTAATGAGGGCATCTGATACATCAAAGCCACCC TATGTGGCAAGAGTTGAGGCTATTGAGGCTGCAGGGTCACGAGGCACAAATGTGAGAGTA CGGGTGCGGTGGTACTATCGGCCAGAGGAGTCCATGGGTGGAAGGCGTCCATTTCATGGT GCCAAAGAGGTGTTCCTCTCGGATCACTATGACGTACAGAGTGCTGACACCATAGAGGGA AAGTGCAACGTTCACAGCTTCCGTAGCTACACAAAGCTTGATTCTGTCAATGCTGAGGAC TTCTTCTGTCGCTTTGAGTACAAATCAGCCACAGGAAGCTTCGTGCCCGACCGCATTGCT GTGTTCTGCAAGTGTGAGATGCCATACAATCCTGATGACCTTATGATCCAATGTGAGGAA TGCTCTGATTGGTTTCACCCTTCTTGCATTGGAATGACTATTAAAGATGCAAAAAAACTA GAGCATTTTTTCTGCCAGAGCTGTACTGCGGAAAATGGAAAGATGGCTGAGAATTCTCAT GAAGCTACAGCGCAATCCGAAGAAAAGCAGGTGGAGTCAAAAAGACGGAGAAGGTGA

Peptide Sequence

PEP ID	Os07t0186400-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:4606698:4614551:1 gene:Os07g0186400 transcript:Os07t0186400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SHL1. (Os07t0186400-01)
Sequence	MAKSRPPKRILESYTIKGSDKVIKPGDCVLMRASDTSKPPYVARVEAIEAAGSRGTNVRV RVRWYYRPEESMGGRRPFHGAKEVFLSDHYDVQSADTIEGKCNVHSFRSYTKLDSVNAED FFCRFEYKSATGSFVPDRIAVFCKCEMPYNPDDLMIQCEECSDWFHPSCIGMTIKDAKKL EHFFCQSCTAENGKMAENSHEATAQSEEKQVESKRRRR

Transcript Sequence

Transcript ID	Os07t0186400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:4606698:4614551:1 gene:Os07g0186400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SHL1. (Os07t0186400-01)
Sequence	ACGAATTCCCAATAAAGAAATAGGCAAAATTCCCCATCTCCTCGTCTCCTCCCAACTCCA AACCCTAGCTCCCACCCCCTCTCGCCGTCGCCGTCGCGTCCCATGGCGAAGTCGCGGCCG CCCAAGCGGATCCTCGAGTCCTACACCATCAAGGGCTCCGACAAAGTCATCAAGCCTGGG GACTGTGTGCTAATGAGGGCATCTGATACATCAAAGCCACCCTATGTGGCAAGAGTTGAG GCTATTGAGGCTGCAGGGTCACGAGGCACAAATGTGAGAGTACGGGTGCGGTGGTACTAT CGGCCAGAGGAGTCCATGGGTGGAAGGCGTCCATTTCATGGTGCCAAAGAGGTGTTCCTC TCGGATCACTATGACGTACAGAGTGCTGACACCATAGAGGGAAAGTGCAACGTTCACAGC TTCCGTAGCTACACAAAGCTTGATTCTGTCAATGCTGAGGACTTCTTCTGTCGCTTTGAG TACAAATCAGCCACAGGAAGCTTCGTGCCCGACCGCATTGCTGTGTTCTGCAAGTGTGAG ATGCCATACAATCCTGATGACCTTATGATCCAATGTGAGGAATGCTCTGATTGGTTTCAC CCTTCTTGCATTGGAATGACTATTAAAGATGCAAAAAAACTAGAGCATTTTTTCTGCCAG AGCTGTACTGCGGAAAATGGAAAGATGGCTGAGAATTCTCATGAAGCTACAGCGCAATCC GAAGAAAAGCAGGTGGAGTCAAAAAGACGGAGAAGGTGACTGCCCCCCAGATTCATTGAC GAGATACACCTGGATGTACAAAGCCTTCTCAAGTTGGTGTAATGCTATTTATTTGTCATG GCAAGTGTGTGTGACCCACGACCACGAGAGTCCCTTCCTGTAATGTCAGTCGCATGGTGT ACATAAACTTTTCAACCTGAGACTGTTGTATTAGGAGACGACACGACCTGTTGTTGTTGC ATGATGTTTTTAGCAGCGTCAGAATTAGCATGGTAGAGTCGGGTGATGAAGCCCCTCGCG GGCATTAGGACTCCCGTATGGATGTTATCACTGATCATACATTGATACTACATTGGATGC AGTTGAGTCTGTCATCTGCGTTTGTCTTTGGAGAATTCTTGTACCATCAATCCATCATGT GAACTTTGATTCT