Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0184900-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:4485257:4496249:1 gene:Os07g0184900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice homolog of Ku70, Ku70 homolog description:ATP-dependent DNA helicase 2 subunit KU70, Maintenance of chromosomal stability, Developmental growth, Telomere length regulation (Os07t0184900-01);Hypothetical conserved gene. (Os07t0184900-02);Similar to Ku70 homolog. (Os07t0184900-03);Hypothetical conserved gene. (Os07t0184900-04)
Sequence	ATGGATCTGGACCCCGAGGGCCTCTTCCGCGACGACAGCGACGAGGATGACGACAACGTC CAGGAGAGGGAGGCCAACAAGGAGATGGTCGTCTACCTCATCGACGCCTCGCCCAAGATG TTCACCCCTGCGACCAAGGCAGATGAAAAGGAGGAGACACATTTTCATACGATAGTGAAC TGCATCACACATGCGCTGAAGACGCAGATTATCGGTAGATCCTATGATGAAGTCGCTATA TGTTTCTTTAACACGAAAGAAAAGAAGAATTTACAGGAATTGGCTGGTGTTTATGTTTAT AATGTTACAGAGAGAGAACCACTTGATAGGCCTGATGCAAGATTGATTAAGGAATTTTCT TGTATAGAAGATTCTTTTATGAGTAATATTGGAAGTCGGTACGGAATAACTTCTGGATCT CGAGAGAATACCTTGTACAATGCTCTTTGGGTTGCACAGGCATTGCTGCGTAAAGGATCT GTGAAGACTGTGAGTAAGCGGATTGTTATATTCACCAACGAAGATGATCCTTTTGGTGGT CTTACAGGAGCAGTAAAGACTGATATGATAAGGACAACAATCCAACGTGCAAGAGATGCA CAAGATCTTGGCCTGTCCATTGAACTTCTTCCTTTGAGTAGGCCCGATGAGGAGTTCAAC ATGTCCCTGTTTTATGCAGATTTAATTGGTCTGGAGGGAGATGAAATAGTGGATTATCTG CCATCTTCTGGTGAAAAGCTGGAGGATATGACTAATCAGCTGAAAAAACGAATGATGAAG AAACGCAAAGTCAAAACTCTTGCATTTGCAATTACCAATGATGTTTGCATAGAGGTGAAT ACATATGCGCTAATCCGTTCAACTACTCCAGGGGCAATTACATGGCTTGATTCTATCAGC AACCTGCCATTGAAGGCTGAAAGGTCTTTCATATGCAATGACACTGGGGCCCTTATTCAG GATCCACAAAAGCGCTTCCAGGTGTACAATGACAAAATTGTTAAATTCTCTACTCGTGAA TTGTCTGATGTGAAGAGGGTTTCAAGTCATCATCTACGCCTTTTAGGATTCAAGCCACTG GACTACCTTAAAGATTATCACAACTTAAGACCGTCAACATTTATTTACCCCAGTGATGAG CAAATATTTGGAAGCACTCGTGTTTTCGTTGCTTTACATAGCTCAATGCGGCGTCTTGGA AGGTTTGCACTTGCATTTTACGGGAATCCAACTCGCCCACAACTTGTAGCCCTTATTGCA CAAGAAGAGGTTACTTCTGCTGGTGGTCAAATTGAACCACCTGGAATACACATGATCTAT CTTCCATACTCGGATGATGTTAGATATCCTGAGGAGGTTCATCTGACTTCTGATGATGCA CCTCGTGCCACAGATGAACAAATTAAGAAAGCTTCAAATCTATTGAGACGTATTGATTTG AAGAACTTCTCAGTATGCCAATTTTCTAACCCAGCATTGCAAAGACACTATGGGATCTTG GAGGCCTTAGCTTTAGGTGAAGATGAGATGCCAGATGTCAAGGATGAAACCCTTCCTGAT GAAGAGGGCTTGGCTAGGCCAGTAGTAGTTAAAGCTGTCGAGGAATTTAAGGCTTCAGTC TATGGTGAAAATTATGATCAAGAGGAAGCCGAGGCAGCAGCAGCGAAGGCTGGGGCTTCA AAGAAGAGGAAAGCACTTACTGATGCAGCTGCAGAGAAAAGTGCAGCACATAATTGGGCA GAACTTGCGGATACTGGAAAGCTGAAGGACATGACGGTGGTGGACTTGAAATCTTACCTG AGTGCACATGGCCTCCCAGTTTCTGGAAAGAAAGAGGCACTCGTCAGCAGAATCTTGACT CATCTAGGCAAGTGA

Peptide Sequence

PEP ID	Os07t0184900-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:4485257:4496249:1 gene:Os07g0184900 transcript:Os07t0184900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice homolog of Ku70, Ku70 homolog description:ATP-dependent DNA helicase 2 subunit KU70, Maintenance of chromosomal stability, Developmental growth, Telomere length regulation (Os07t0184900-01);Hypothetical conserved gene. (Os07t0184900-02);Similar to Ku70 homolog. (Os07t0184900-03);Hypothetical conserved gene. (Os07t0184900-04)
Sequence	MDLDPEGLFRDDSDEDDDNVQEREANKEMVVYLIDASPKMFTPATKADEKEETHFHTIVN CITHALKTQIIGRSYDEVAICFFNTKEKKNLQELAGVYVYNVTEREPLDRPDARLIKEFS CIEDSFMSNIGSRYGITSGSRENTLYNALWVAQALLRKGSVKTVSKRIVIFTNEDDPFGG LTGAVKTDMIRTTIQRARDAQDLGLSIELLPLSRPDEEFNMSLFYADLIGLEGDEIVDYL PSSGEKLEDMTNQLKKRMMKKRKVKTLAFAITNDVCIEVNTYALIRSTTPGAITWLDSIS NLPLKAERSFICNDTGALIQDPQKRFQVYNDKIVKFSTRELSDVKRVSSHHLRLLGFKPL DYLKDYHNLRPSTFIYPSDEQIFGSTRVFVALHSSMRRLGRFALAFYGNPTRPQLVALIA QEEVTSAGGQIEPPGIHMIYLPYSDDVRYPEEVHLTSDDAPRATDEQIKKASNLLRRIDL KNFSVCQFSNPALQRHYGILEALALGEDEMPDVKDETLPDEEGLARPVVVKAVEEFKASV YGENYDQEEAEAAAAKAGASKKRKALTDAAAEKSAAHNWAELADTGKLKDMTVVDLKSYL SAHGLPVSGKKEALVSRILTHLGK

Transcript Sequence

Transcript ID	Os07t0184900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:4485257:4496249:1 gene:Os07g0184900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice homolog of Ku70, Ku70 homolog description:ATP-dependent DNA helicase 2 subunit KU70, Maintenance of chromosomal stability, Developmental growth, Telomere length regulation (Os07t0184900-01);Hypothetical conserved gene. (Os07t0184900-02);Similar to Ku70 homolog. (Os07t0184900-03);Hypothetical conserved gene. (Os07t0184900-04)
Sequence	CTAGTTGGCTTCCAGAAGCTTCTAGAAGGTGCCCGAGGCGTCGTCTCGGTCGAGCGCCAT GGATCTGGACCCCGAGGGCCTCTTCCGCGACGACAGCGACGAGGATGACGACAACGTCCA GGAGAGGGAGGCCAACAAGGAGATGGTCGTCTACCTCATCGACGCCTCGCCCAAGATGTT CACCCCTGCGACCAAGGCAGATGAAAAGGAGGAGACACATTTTCATACGATAGTGAACTG CATCACACATGCGCTGAAGACGCAGATTATCGGTAGATCCTATGATGAAGTCGCTATATG TTTCTTTAACACGAAAGAAAAGAAGAATTTACAGGAATTGGCTGGTGTTTATGTTTATAA TGTTACAGAGAGAGAACCACTTGATAGGCCTGATGCAAGATTGATTAAGGAATTTTCTTG TATAGAAGATTCTTTTATGAGTAATATTGGAAGTCGGTACGGAATAACTTCTGGATCTCG AGAGAATACCTTGTACAATGCTCTTTGGGTTGCACAGGCATTGCTGCGTAAAGGATCTGT GAAGACTGTGAGTAAGCGGATTGTTATATTCACCAACGAAGATGATCCTTTTGGTGGTCT TACAGGAGCAGTAAAGACTGATATGATAAGGACAACAATCCAACGTGCAAGAGATGCACA AGATCTTGGCCTGTCCATTGAACTTCTTCCTTTGAGTAGGCCCGATGAGGAGTTCAACAT GTCCCTGTTTTATGCAGATTTAATTGGTCTGGAGGGAGATGAAATAGTGGATTATCTGCC ATCTTCTGGTGAAAAGCTGGAGGATATGACTAATCAGCTGAAAAAACGAATGATGAAGAA ACGCAAAGTCAAAACTCTTGCATTTGCAATTACCAATGATGTTTGCATAGAGGTGAATAC ATATGCGCTAATCCGTTCAACTACTCCAGGGGCAATTACATGGCTTGATTCTATCAGCAA CCTGCCATTGAAGGCTGAAAGGTCTTTCATATGCAATGACACTGGGGCCCTTATTCAGGA TCCACAAAAGCGCTTCCAGGTGTACAATGACAAAATTGTTAAATTCTCTACTCGTGAATT GTCTGATGTGAAGAGGGTTTCAAGTCATCATCTACGCCTTTTAGGATTCAAGCCACTGGA CTACCTTAAAGATTATCACAACTTAAGACCGTCAACATTTATTTACCCCAGTGATGAGCA AATATTTGGAAGCACTCGTGTTTTCGTTGCTTTACATAGCTCAATGCGGCGTCTTGGAAG GTTTGCACTTGCATTTTACGGGAATCCAACTCGCCCACAACTTGTAGCCCTTATTGCACA AGAAGAGGTTACTTCTGCTGGTGGTCAAATTGAACCACCTGGAATACACATGATCTATCT TCCATACTCGGATGATGTTAGATATCCTGAGGAGGTTCATCTGACTTCTGATGATGCACC TCGTGCCACAGATGAACAAATTAAGAAAGCTTCAAATCTATTGAGACGTATTGATTTGAA GAACTTCTCAGTATGCCAATTTTCTAACCCAGCATTGCAAAGACACTATGGGATCTTGGA GGCCTTAGCTTTAGGTGAAGATGAGATGCCAGATGTCAAGGATGAAACCCTTCCTGATGA AGAGGGCTTGGCTAGGCCAGTAGTAGTTAAAGCTGTCGAGGAATTTAAGGCTTCAGTCTA TGGTGAAAATTATGATCAAGAGGAAGCCGAGGCAGCAGCAGCGAAGGCTGGGGCTTCAAA GAAGAGGAAAGCACTTACTGATGCAGCTGCAGAGAAAAGTGCAGCACATAATTGGGCAGA ACTTGCGGATACTGGAAAGCTGAAGGACATGACGGTGGTGGACTTGAAATCTTACCTGAG TGCACATGGCCTCCCAGTTTCTGGAAAGAAAGAGGCACTCGTCAGCAGAATCTTGACTCA TCTAGGCAAGTGAAATGGTCCACTTCGACGGCCTACTCAGTTTTAGCTAACTCTGTAAGC TATCTAAATTTCTCTGAACATCTTGAAGTGCCTATCAAAAACCCTCTCCCTGCTTAGGCT GTGCCAAATTTTGTAGCAATATGACAACAGCTGACCCCAGTTCATTTGGTATCATGTGCT TTTGTGACATGTACCACTGGGATTTCTCTTAAATGTCACTCCAGTCTGCAGAGATCAGAT CATTGTTGGTAGAGGAAAGTGATCCATTAGAGAAAGCAACACCAAACAAGATTATTAAGA CATTTTTTAAGTGAAGCAGTTGCAACC