Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0184800-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:4483447:4484756:1 gene:Os07g0184800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Variant of histone H1. (Os07t0184800-01)
Sequence

ATGGCGACTGAGGAGGTTGTCCCTGAGGTTCCGGTGACCGAGGTGGAGGCTGCCGCGGCG
GAGGAGGCCGTCGAGGAGACGACGGCGGCGGAGGAGAAGGCCGCCAAGCCGGCGAAGGAG
AAGAAGAAGGCCGGCAGGCCGCCGAAGGAGAAGAAGGAGGCCAAGCCGGCGAAGGAGAAG
AAGGTGAAGGAGGCCAAGGCCAAGAAGCCCCGCGTCGCCGCCGCCCACCCGCCGTACGCC
GAGATGATCATGGAGGCGATCGTGGCGCTGAAGGAGAGGACTGGATCGAGCTCCCAGGCC
ATCGGCAAGCACATCCATGCCAACCATGGCGCCAACCTGCCGCCCAACTTCCGCAAGCTC
CTCTCCGGCAACCTCAAGAAGCTCACCGCCGCCGGCAAGCTGGCCAAGGTCAAGAACTCC
TTCAAGCTCTCCTCCACCCGCCCTGCCGCTCCGGCCGCCGCCGACGCCAAGCCCAAGGCC
GCCCCCGCCACGAAGCCCAAGGTCAAGACCACCAAGGCCGCGAAGCCGGCTGCCAAGGCG
AAGGCTCCTGCTACCACCAAGGCCGCGAAGCCGGCGACCAAGACCAAGATCAAGGTCGCC
GCCGCGCCGGCGGCGAAGCCCAAGGCGTCTCCCAAGGCGAAGGCCAAGACCGCCACCTCG
CCGGTGAAGCCCCGCGGCCGCCCTGCCAAGTCCGCCAAGACCTCTGCCAAGGACTCGCCT
GCCAAGAAGGCGGCGCCGGTGGCTGCCAAGAAGAAGGCGGCGGCGACCAAGAAGAAGGCG
TCGGTGGCTGCGGCGCCGGCTGCTCGCAAGGGTGCGGCGAGGAAGAGCATGAAGTAG

Peptide Sequence

PEP ID

Os07t0184800-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:4483447:4484756:1 gene:Os07g0184800 transcript:Os07t0184800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Variant of histone H1. (Os07t0184800-01)
Sequence

MATEEVVPEVPVTEVEAAAAEEAVEETTAAEEKAAKPAKEKKKAGRPPKEKKEAKPAKEK
KVKEAKAKKPRVAAAHPPYAEMIMEAIVALKERTGSSSQAIGKHIHANHGANLPPNFRKL
LSGNLKKLTAAGKLAKVKNSFKLSSTRPAAPAAADAKPKAAPATKPKVKTTKAAKPAAKA
KAPATTKAAKPATKTKIKVAAAPAAKPKASPKAKAKTATSPVKPRGRPAKSAKTSAKDSP
AKKAAPVAAKKKAAATKKKASVAAAPAARKGAARKSMK

Transcript Sequence

Transcript ID

Os07t0184800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:4483447:4484756:1 gene:Os07g0184800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Variant of histone H1. (Os07t0184800-01)
Sequence

CTCACCCACATCCGCCGCCGCCGCCGCAGAATCGGAAGCAATCCGCCGCGAGTCGCGACC
ATTTCTTGCGAGTAGTAGTAGAGGGGAGAGTGAGTGAGGGGCGTGCTGCAATGGCGACTG
AGGAGGTTGTCCCTGAGGTTCCGGTGACCGAGGTGGAGGCTGCCGCGGCGGAGGAGGCCG
TCGAGGAGACGACGGCGGCGGAGGAGAAGGCCGCCAAGCCGGCGAAGGAGAAGAAGAAGG
CCGGCAGGCCGCCGAAGGAGAAGAAGGAGGCCAAGCCGGCGAAGGAGAAGAAGGTGAAGG
AGGCCAAGGCCAAGAAGCCCCGCGTCGCCGCCGCCCACCCGCCGTACGCCGAGATGATCA
TGGAGGCGATCGTGGCGCTGAAGGAGAGGACTGGATCGAGCTCCCAGGCCATCGGCAAGC
ACATCCATGCCAACCATGGCGCCAACCTGCCGCCCAACTTCCGCAAGCTCCTCTCCGGCA
ACCTCAAGAAGCTCACCGCCGCCGGCAAGCTGGCCAAGGTCAAGAACTCCTTCAAGCTCT
CCTCCACCCGCCCTGCCGCTCCGGCCGCCGCCGACGCCAAGCCCAAGGCCGCCCCCGCCA
CGAAGCCCAAGGTCAAGACCACCAAGGCCGCGAAGCCGGCTGCCAAGGCGAAGGCTCCTG
CTACCACCAAGGCCGCGAAGCCGGCGACCAAGACCAAGATCAAGGTCGCCGCCGCGCCGG
CGGCGAAGCCCAAGGCGTCTCCCAAGGCGAAGGCCAAGACCGCCACCTCGCCGGTGAAGC
CCCGCGGCCGCCCTGCCAAGTCCGCCAAGACCTCTGCCAAGGACTCGCCTGCCAAGAAGG
CGGCGCCGGTGGCTGCCAAGAAGAAGGCGGCGGCGACCAAGAAGAAGGCGTCGGTGGCTG
CGGCGCCGGCTGCTCGCAAGGGTGCGGCGAGGAAGAGCATGAAGTAGAGGTCGCCGGCGA
TGATGCCACCTGGATTGGATTGCCCACCTTTTGATCTCCACAGGCGACAGCGCCATTAGC
ATCATCATCAGCAAGTAGTAGCAGAAATTGTGTTCTGTAAATGCTTGTTCGTCTTAGTTC
GTTTCACCTCCCTCTAGGCGGTATCATCATCTTCTCGCCTGTAATGATAGGATCCCATCA
TCCTCAAAAACCATAATACAAATATCTATTTCGTCTT