Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0180100-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:4219935:4221821:1 gene:Os07g0180100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0180100-00)
Sequence

ATGAAGAATTTGGTGGAACTATATTATGAGAGGGAAATCCAGCTGTTTGTCCTCGTCAGC
TTCGCACTCCAAGTGTTCCTCTTTTTCACTGGCAGCCTTCGGCGGCGCAGCACCAACATA
TTCCTCAGTGTTTCTATTTGGACAGCTTATTTAGGAGCAGATTGGGTAGCAGTTTATGCT
CTTGGCAACCTCTCAGGAGTACAGGAGAGCATCATATCAAGGAGAAGTCAGCTGCCACTG
TCTTTTTTTTGGGCACCGTTTTTCCTCATCCATCTCGGTGGTCAGGACACAATCACTGCT
TTTGCCATGGAGGACAATGACTTGTGGCTGAGGCATTTCTTGAATTTGGTCGTGCAAGTA
GTCCTCGCCGTGTACGTTTTCTGGAAGTCAGCTAGAAGGCAGAGTGCGGAGCTTATAGTT
TCGGGTGTGTTCGTGTTCATCGTTGGAGTTATCAAGTATGGAGAAAGGACATGGTCACTC
AAGTGTGGGAGCTCAAAAAGCCTTGAGAGCTCACCTGGGCATCACTACAAGCAACGGTTT
CCGGAACTAAGAGACTCTGATTGCGACTATCGAAATATGGTTTCCAATGCTCTATGTTCA
ATGTTCAATGTCCTCAATGTCTTTGCAGCGCGCAACTTGTTCGGTTATAGCTTCCCAAGT
GTTGGTCCAGATGATACTCAAGTCGACGCCAAAAAAATGTTCAAGTTGGTGGAGCTTGAG
CTCGCCATGATGTACGATGACCTCTACACAAAGGCTCTTGTGCTGAGAACAAGGACAGGC
ATTATACTCCGATGCATCTCTCACGCATGCTCCTTCGTTGCTTTTGCACTCTTCCTTGCG
AGTGATAAAGATCGGTACATTGGAGTTGATATTGCAATTACGTATTCACTGTTTATCGGA
GGCTTTTTCCTAGATTTTTGTGCGATGTTTATTGTCATAACATCTCCATGGACTTGGGTC
TGGTTGAAGGCTGCACAGAAGAGAGACTGGCTAGCCAACTTGTCCTGGTTCCTCTTTTCC
AGTGATATTGGGTGGCCCGAGAGAAGGCCACTGTGGTCTAGTTCCATTGGACAGTACAGC
TTACTCAGCTGGGACTCTGGATCAGACCAACCAACAAGATCATGCAACCAGAAAGTGATG
GCTCTGGTGAGAAGATCGGCGAGGTTAGTCGGCGTTGGAAAGAAAAAATTGTTTTGGATG
AGCAAGCTGCTGGACACTAAGTTCCTAGAGGTAGATGAGAAGACGATGGAGTTTGTGGTG
GAGGGGATCAATCGCATCCGCGACGAATTCTCCGATGTCGCGTCCCGGGCATGGCCAAAG
CTTGGCCCATTCCTCGAAACCATAAGAGTTCATTTCACCGCGGACTTTGGTGCTGCCATT
GTCGTGATTCACTCATTCACAGAGGAGTACCTGATGAATGCTGCTGCTGCAGCAGAAGAA
GAAGAAGAAGAAGCAGGTCAGGGAGGAGAAGCAAATGATATGATGGAGGTGTGCCGGAAG
CTGTCCAACTACATGATGTACCTCTTGGTGAACCACCCTTCCATGCTGCCGCTCAACGTC
AGCTCCGAGGCTACGCTGGCTGAGGCTGCGCAGCTGATGAAGGTGGTGAGAGGGCGAGCA
CTGGAGGAGATGGTGGATCCATGCGACGAAACGTTGAGGGAGATGGTGGACATGTGGACG
AGGCTCCTCATCTACACCGCCGGCAAGTCCCGGGGGCCGATGCACGCGGCGGAGCTGGCC
TGTGGAGGGGAGCTCATCACCTTCGTCTGGCTGCTCATGGTCAAGGCCGGCCTCGGGGAT
TCCGAGGCGAAAAGGATCCTCATTGCAAATTCTGCTTGCGCCGACACTAATACGAAGGAA
GCCTATGCCTTTTATTTCGCTTCGTGA

Peptide Sequence

PEP ID

Os07t0180100-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:4219935:4221821:1 gene:Os07g0180100 transcript:Os07t0180100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0180100-00)
Sequence

MKNLVELYYEREIQLFVLVSFALQVFLFFTGSLRRRSTNIFLSVSIWTAYLGADWVAVYA
LGNLSGVQESIISRRSQLPLSFFWAPFFLIHLGGQDTITAFAMEDNDLWLRHFLNLVVQV
VLAVYVFWKSARRQSAELIVSGVFVFIVGVIKYGERTWSLKCGSSKSLESSPGHHYKQRF
PELRDSDCDYRNMVSNALCSMFNVLNVFAARNLFGYSFPSVGPDDTQVDAKKMFKLVELE
LAMMYDDLYTKALVLRTRTGIILRCISHACSFVAFALFLASDKDRYIGVDIAITYSLFIG
GFFLDFCAMFIVITSPWTWVWLKAAQKRDWLANLSWFLFSSDIGWPERRPLWSSSIGQYS
LLSWDSGSDQPTRSCNQKVMALVRRSARLVGVGKKKLFWMSKLLDTKFLEVDEKTMEFVV
EGINRIRDEFSDVASRAWPKLGPFLETIRVHFTADFGAAIVVIHSFTEEYLMNAAAAAEE
EEEEAGQGGEANDMMEVCRKLSNYMMYLLVNHPSMLPLNVSSEATLAEAAQLMKVVRGRA
LEEMVDPCDETLREMVDMWTRLLIYTAGKSRGPMHAAELACGGELITFVWLLMVKAGLGD
SEAKRILIANSACADTNTKEAYAFYFAS

Transcript Sequence

Transcript ID

Os07t0180100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:4219935:4221821:1 gene:Os07g0180100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0180100-00)
Sequence

ATGAAGAATTTGGTGGAACTATATTATGAGAGGGAAATCCAGCTGTTTGTCCTCGTCAGC
TTCGCACTCCAAGTGTTCCTCTTTTTCACTGGCAGCCTTCGGCGGCGCAGCACCAACATA
TTCCTCAGTGTTTCTATTTGGACAGCTTATTTAGGAGCAGATTGGGTAGCAGTTTATGCT
CTTGGCAACCTCTCAGGAGTACAGGAGAGCATCATATCAAGGAGAAGTCAGCTGCCACTG
TCTTTTTTTTGGGCACCGTTTTTCCTCATCCATCTCGGTGGTCAGGACACAATCACTGCT
TTTGCCATGGAGGACAATGACTTGTGGCTGAGGCATTTCTTGAATTTGGTCGTGCAAGTA
GTCCTCGCCGTGTACGTTTTCTGGAAGTCAGCTAGAAGGCAGAGTGCGGAGCTTATAGTT
TCGGGTGTGTTCGTGTTCATCGTTGGAGTTATCAAGTATGGAGAAAGGACATGGTCACTC
AAGTGTGGGAGCTCAAAAAGCCTTGAGAGCTCACCTGGGCATCACTACAAGCAACGGTTT
CCGGAACTAAGAGACTCTGATTGCGACTATCGAAATATGGTTTCCAATGCTCTATGTTCA
ATGTTCAATGTCCTCAATGTCTTTGCAGCGCGCAACTTGTTCGGTTATAGCTTCCCAAGT
GTTGGTCCAGATGATACTCAAGTCGACGCCAAAAAAATGTTCAAGTTGGTGGAGCTTGAG
CTCGCCATGATGTACGATGACCTCTACACAAAGGCTCTTGTGCTGAGAACAAGGACAGGC
ATTATACTCCGATGCATCTCTCACGCATGCTCCTTCGTTGCTTTTGCACTCTTCCTTGCG
AGTGATAAAGATCGGTACATTGGAGTTGATATTGCAATTACGTATTCACTGTTTATCGGA
GGCTTTTTCCTAGATTTTTGTGCGATGTTTATTGTCATAACATCTCCATGGACTTGGGTC
TGGTTGAAGGCTGCACAGAAGAGAGACTGGCTAGCCAACTTGTCCTGGTTCCTCTTTTCC
AGTGATATTGGGTGGCCCGAGAGAAGGCCACTGTGGTCTAGTTCCATTGGACAGTACAGC
TTACTCAGCTGGGACTCTGGATCAGACCAACCAACAAGATCATGCAACCAGAAAGTGATG
GCTCTGGTGAGAAGATCGGCGAGGTTAGTCGGCGTTGGAAAGAAAAAATTGTTTTGGATG
AGCAAGCTGCTGGACACTAAGTTCCTAGAGGTAGATGAGAAGACGATGGAGTTTGTGGTG
GAGGGGATCAATCGCATCCGCGACGAATTCTCCGATGTCGCGTCCCGGGCATGGCCAAAG
CTTGGCCCATTCCTCGAAACCATAAGAGTTCATTTCACCGCGGACTTTGGTGCTGCCATT
GTCGTGATTCACTCATTCACAGAGGAGTACCTGATGAATGCTGCTGCTGCAGCAGAAGAA
GAAGAAGAAGAAGCAGGTCAGGGAGGAGAAGCAAATGATATGATGGAGGTGTGCCGGAAG
CTGTCCAACTACATGATGTACCTCTTGGTGAACCACCCTTCCATGCTGCCGCTCAACGTC
AGCTCCGAGGCTACGCTGGCTGAGGCTGCGCAGCTGATGAAGGTGGTGAGAGGGCGAGCA
CTGGAGGAGATGGTGGATCCATGCGACGAAACGTTGAGGGAGATGGTGGACATGTGGACG
AGGCTCCTCATCTACACCGCCGGCAAGTCCCGGGGGCCGATGCACGCGGCGGAGCTGGCC
TGTGGAGGGGAGCTCATCACCTTCGTCTGGCTGCTCATGGTCAAGGCCGGCCTCGGGGAT
TCCGAGGCGAAAAGGATCCTCATTGCAAATTCTGCTTGCGCCGACACTAATACGAAGGAA
GCCTATGCCTTTTATTTCGCTTCGTGA